SOLTUB.AGRIA.G00000002973

Description : E3 ubiquitin-protein ligase makorin

Gene families : OG_02_0018226 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000002973
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_63

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	AHRD
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007275	multicellular organism development	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	AHRD
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	IEA	AHRD
MF	GO:0061630	ubiquitin protein ligase activity	IEA	AHRD
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0000322	storage vacuole	IEP	Predict GO terms from Neighborhoods
CC	GO:0000325	plant-type vacuole	IEP	Predict GO terms from Neighborhoods
CC	GO:0000326	protein storage vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0000372	Group I intron splicing	IEP	Predict GO terms from Neighborhoods
BP	GO:0000373	Group II intron splicing	IEP	Predict GO terms from Neighborhoods
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Predict GO terms from Neighborhoods
BP	GO:0000376	RNA splicing, via transesterification reactions with guanosine as nucleophile	IEP	Predict GO terms from Neighborhoods
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Predict GO terms from Neighborhoods
BP	GO:0000963	mitochondrial RNA processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0005773	vacuole	IEP	Predict GO terms from Neighborhoods
CC	GO:0005783	endoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
CC	GO:0005794	Golgi apparatus	IEP	Predict GO terms from Neighborhoods
CC	GO:0005923	bicellular tight junction	IEP	Predict GO terms from Neighborhoods
CC	GO:0005935	cellular bud neck	IEP	Predict GO terms from Neighborhoods
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006874	cellular calcium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006900	vesicle budding from membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0006914	autophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0007163	establishment or maintenance of cell polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:0007420	brain development	IEP	Predict GO terms from Neighborhoods
MF	GO:0008017	microtubule binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0008360	regulation of cell shape	IEP	Predict GO terms from Neighborhoods
BP	GO:0008654	phospholipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009116	nucleoside metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010467	gene expression	IEP	Predict GO terms from Neighborhoods
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0015630	microtubule cytoskeleton	IEP	Predict GO terms from Neighborhoods
BP	GO:0015693	magnesium ion transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0016021	integral component of membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0016032	viral process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016236	macroautophagy	IEP	Predict GO terms from Neighborhoods
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Predict GO terms from Neighborhoods
BP	GO:0019048	modulation by virus of host process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019213	deacetylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0022406	membrane docking	IEP	Predict GO terms from Neighborhoods
BP	GO:0030968	endoplasmic reticulum unfolded protein response	IEP	Predict GO terms from Neighborhoods
BP	GO:0031175	neuron projection development	IEP	Predict GO terms from Neighborhoods
CC	GO:0031224	intrinsic component of membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031426	polycistronic mRNA processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0031965	nuclear membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031984	organelle subcompartment	IEP	Predict GO terms from Neighborhoods
BP	GO:0032386	regulation of intracellular transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0032387	negative regulation of intracellular transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0032541	cortical endoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
MF	GO:0033149	FFAT motif binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0033157	regulation of intracellular protein transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0035821	modulation of process of another organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0036498	IRE1-mediated unfolded protein response	IEP	Predict GO terms from Neighborhoods
MF	GO:0042171	lysophosphatidic acid acyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042278	purine nucleoside metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042306	regulation of protein import into nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0042308	negative regulation of protein import into nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0044003	modulation by symbiont of host process	IEP	Predict GO terms from Neighborhoods
CC	GO:0044232	organelle membrane contact site	IEP	Predict GO terms from Neighborhoods
BP	GO:0044788	modulation by host of viral process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044790	suppression of viral release by host	IEP	Predict GO terms from Neighborhoods
BP	GO:0044791	obsolete positive regulation by host of viral release from host cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0044793	negative regulation by host of viral process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044794	positive regulation by host of viral process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044827	modulation by host of viral genome replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0044828	negative regulation by host of viral genome replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0044829	positive regulation by host of viral genome replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0044830	modulation by host of viral RNA genome replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045069	regulation of viral genome replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0045070	positive regulation of viral genome replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0046470	phosphatidylcholine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046719	regulation by virus of viral protein levels in host cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0046725	negative regulation by virus of viral protein levels in host cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0046822	regulation of nucleocytoplasmic transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0046823	negative regulation of nucleocytoplasmic transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0048487	beta-tubulin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0048524	positive regulation of viral process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048525	negative regulation of viral process	IEP	Predict GO terms from Neighborhoods
BP	GO:0050792	regulation of viral process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051051	negative regulation of transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0051224	negative regulation of protein transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0051643	endoplasmic reticulum localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051701	biological process involved in interaction with host	IEP	Predict GO terms from Neighborhoods
BP	GO:0051725	protein de-ADP-ribosylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051851	modulation by host of symbiont process	IEP	Predict GO terms from Neighborhoods
BP	GO:0055074	calcium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0061709	reticulophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0061817	endoplasmic reticulum-plasma membrane tethering	IEP	Predict GO terms from Neighborhoods
BP	GO:0061912	selective autophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0061919	process utilizing autophagic mechanism	IEP	Predict GO terms from Neighborhoods
CC	GO:0070160	tight junction	IEP	Predict GO terms from Neighborhoods
MF	GO:0071617	lysophospholipid acyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0071618	lysophosphatidylethanolamine acyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0071782	endoplasmic reticulum tubular network	IEP	Predict GO terms from Neighborhoods
BP	GO:0071963	establishment or maintenance of cell polarity regulating cell shape	IEP	Predict GO terms from Neighborhoods
BP	GO:0072503	cellular divalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0072507	divalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0090114	COPII-coated vesicle budding	IEP	Predict GO terms from Neighborhoods
BP	GO:0090158	endoplasmic reticulum membrane organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0090317	negative regulation of intracellular protein transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0090615	mitochondrial mRNA processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0098827	endoplasmic reticulum subcompartment	IEP	Predict GO terms from Neighborhoods
BP	GO:0140040	mitochondrial polycistronic RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0140053	mitochondrial gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0140056	organelle localization by membrane tethering	IEP	Predict GO terms from Neighborhoods
CC	GO:0140268	endoplasmic reticulum-plasma membrane contact site	IEP	Predict GO terms from Neighborhoods
BP	GO:0140291	peptidyl-glutamate ADP-deribosylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0140293	ADP-ribosylglutamate hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1900180	regulation of protein localization to nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:1900181	negative regulation of protein localization to nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:1903008	organelle disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1903828	negative regulation of protein localization	IEP	Predict GO terms from Neighborhoods
BP	GO:1903830	magnesium ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1903900	regulation of viral life cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:1904950	negative regulation of establishment of protein localization	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR036855	Znf_CCCH_sf	3	26
IPR041367	Znf-CCCH_4	34	53
IPR000571	Znf_CCCH	138	160
IPR018957	Znf_C3HC4_RING-type	204	261
IPR036855	Znf_CCCH_sf	32	53
IPR036855	Znf_CCCH_sf	137	160

External Links

No external refs found!

SOLTUB.AGRIA.G00000002973

Expression Profile

Co-expression Networks

Functional Annotation