1. Home
  2. Species
  3. Solanum tuberosum Agria
  4. Sequence
  5. SOLTUB.AGRIA.G00000002978

SOLTUB.AGRIA.G00000002978


Description : Pre-mRNA-splicing factor SYF1


Gene families : OG_02_0005369 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000002978
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_36


Type GO Term Name Evidence Source
BP GO:0000349 generation of catalytic spliceosome for first transesterification step IEA AHRD
CC GO:0000974 Prp19 complex IEA AHRD
BP GO:0001824 blastocyst development IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
BP GO:0006283 transcription-coupled nucleotide-excision repair IEA AHRD
BP GO:0006351 DNA-templated transcription IEA AHRD
BP GO:0007443 Malpighian tubule morphogenesis IEA AHRD
BP GO:0007510 cardioblast cell fate determination IEA AHRD
BP GO:0021987 cerebral cortex development IEA AHRD
CC GO:0071007 U2-type catalytic step 2 spliceosome IEA AHRD
CC GO:0071014 post-mRNA release spliceosomal complex IEA AHRD
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0000086 G2/M transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0000098 sulfur amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0000183 rDNA heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0000245 spliceosomal complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0000270 peptidoglycan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Predict GO terms from Neighborhoods
BP GO:0000354 cis assembly of pre-catalytic spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predict GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predict GO terms from Neighborhoods
BP GO:0000378 RNA exon ligation IEP Predict GO terms from Neighborhoods
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
MF GO:0000384 first spliceosomal transesterification activity IEP Predict GO terms from Neighborhoods
MF GO:0000386 second spliceosomal transesterification activity IEP Predict GO terms from Neighborhoods
BP GO:0000389 mRNA 3'-splice site recognition IEP Predict GO terms from Neighborhoods
BP GO:0000390 spliceosomal complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000469 cleavage involved in rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0000478 endonucleolytic cleavage involved in rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
CC GO:0000813 ESCRT I complex IEP Predict GO terms from Neighborhoods
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0001222 transcription corepressor binding IEP Predict GO terms from Neighborhoods
BP GO:0001410 chlamydospore formation IEP Predict GO terms from Neighborhoods
CC GO:0001651 dense fibrillar component IEP Predict GO terms from Neighborhoods
MF GO:0001734 mRNA (N6-adenosine)-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0001778 plasma membrane repair IEP Predict GO terms from Neighborhoods
BP GO:0002183 cytoplasmic translational initiation IEP Predict GO terms from Neighborhoods
BP GO:0002200 somatic diversification of immune receptors IEP Predict GO terms from Neighborhoods
BP GO:0002229 defense response to oomycetes IEP Predict GO terms from Neighborhoods
BP GO:0002244 hematopoietic progenitor cell differentiation IEP Predict GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Predict GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003697 single-stranded DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003714 transcription corepressor activity IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003724 RNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0005662 DNA replication factor A complex IEP Predict GO terms from Neighborhoods
CC GO:0005677 chromatin silencing complex IEP Predict GO terms from Neighborhoods
CC GO:0005682 U5 snRNP IEP Predict GO terms from Neighborhoods
CC GO:0005686 U2 snRNP IEP Predict GO terms from Neighborhoods
CC GO:0005689 U12-type spliceosomal complex IEP Predict GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Predict GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Predict GO terms from Neighborhoods
CC GO:0005829 cytosol IEP Predict GO terms from Neighborhoods
CC GO:0005851 eukaryotic translation initiation factor 2B complex IEP Predict GO terms from Neighborhoods
CC GO:0005856 cytoskeleton IEP Predict GO terms from Neighborhoods
CC GO:0005880 nuclear microtubule IEP Predict GO terms from Neighborhoods
CC GO:0005901 caveola IEP Predict GO terms from Neighborhoods
BP GO:0006260 DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006261 DNA-templated DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Predict GO terms from Neighborhoods
BP GO:0006337 nucleosome disassembly IEP Predict GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006368 transcription elongation by RNA polymerase II promoter IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006417 regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0006613 cotranslational protein targeting to membrane IEP Predict GO terms from Neighborhoods
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predict GO terms from Neighborhoods
BP GO:0006620 post-translational protein targeting to endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:0006858 extracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0006897 endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0006997 nucleus organization IEP Predict GO terms from Neighborhoods
BP GO:0007009 plasma membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0007010 cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0007049 cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0007094 mitotic spindle assembly checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0007175 negative regulation of epidermal growth factor-activated receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0007176 regulation of epidermal growth factor-activated receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0007281 germ cell development IEP Predict GO terms from Neighborhoods
BP GO:0007338 single fertilization IEP Predict GO terms from Neighborhoods
BP GO:0007420 brain development IEP Predict GO terms from Neighborhoods
BP GO:0007517 muscle organ development IEP Predict GO terms from Neighborhoods
BP GO:0007530 sex determination IEP Predict GO terms from Neighborhoods
BP GO:0007638 mechanosensory behavior IEP Predict GO terms from Neighborhoods
MF GO:0008134 transcription factor binding IEP Predict GO terms from Neighborhoods
MF GO:0008157 protein phosphatase 1 binding IEP Predict GO terms from Neighborhoods
MF GO:0008174 mRNA methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008186 ATP-dependent activity, acting on RNA IEP Predict GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Predict GO terms from Neighborhoods
CC GO:0008623 CHRAC IEP Predict GO terms from Neighborhoods
BP GO:0009071 serine family amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009093 cysteine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009890 negative regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009892 negative regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009893 positive regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009896 positive regulation of catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010001 glial cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0010171 body morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010172 embryonic body morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010219 regulation of vernalization response IEP Predict GO terms from Neighborhoods
BP GO:0010220 positive regulation of vernalization response IEP Predict GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010586 miRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010608 post-transcriptional regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010628 positive regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010948 negative regulation of cell cycle process IEP Predict GO terms from Neighborhoods
MF GO:0015616 DNA translocase activity IEP Predict GO terms from Neighborhoods
CC GO:0015630 microtubule cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016422 mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0016445 somatic diversification of immunoglobulins IEP Predict GO terms from Neighborhoods
CC GO:0016514 SWI/SNF complex IEP Predict GO terms from Neighborhoods
BP GO:0016584 obsolete nucleosome positioning IEP Predict GO terms from Neighborhoods
CC GO:0016586 RSC-type complex IEP Predict GO terms from Neighborhoods
CC GO:0016589 NURF complex IEP Predict GO terms from Neighborhoods
CC GO:0016590 ACF complex IEP Predict GO terms from Neighborhoods
CC GO:0016604 nuclear body IEP Predict GO terms from Neighborhoods
CC GO:0016607 nuclear speck IEP Predict GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0017148 negative regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0018992 germ-line sex determination IEP Predict GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019448 L-cysteine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019450 L-cysteine catabolic process to pyruvate IEP Predict GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Predict GO terms from Neighborhoods
MF GO:0019904 protein domain specific binding IEP Predict GO terms from Neighborhoods
BP GO:0021782 glial cell development IEP Predict GO terms from Neighborhoods
BP GO:0021861 forebrain radial glial cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0022411 cellular component disassembly IEP Predict GO terms from Neighborhoods
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Predict GO terms from Neighborhoods
CC GO:0030027 lamellipodium IEP Predict GO terms from Neighborhoods
BP GO:0030031 cell projection assembly IEP Predict GO terms from Neighborhoods
BP GO:0030100 regulation of endocytosis IEP Predict GO terms from Neighborhoods
CC GO:0030118 clathrin coat IEP Predict GO terms from Neighborhoods
CC GO:0030132 clathrin coat of coated pit IEP Predict GO terms from Neighborhoods
BP GO:0030216 keratinocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030237 female sex determination IEP Predict GO terms from Neighborhoods
MF GO:0030275 LRR domain binding IEP Predict GO terms from Neighborhoods
MF GO:0030331 nuclear estrogen receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0030371 translation repressor activity IEP Predict GO terms from Neighborhoods
CC GO:0030425 dendrite IEP Predict GO terms from Neighborhoods
BP GO:0030436 asexual sporulation IEP Predict GO terms from Neighborhoods
BP GO:0030490 maturation of SSU-rRNA IEP Predict GO terms from Neighborhoods
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
BP GO:0030575 nuclear body organization IEP Predict GO terms from Neighborhoods
BP GO:0030707 ovarian follicle cell development IEP Predict GO terms from Neighborhoods
CC GO:0030874 nucleolar chromatin IEP Predict GO terms from Neighborhoods
CC GO:0031010 ISWI-type complex IEP Predict GO terms from Neighborhoods
BP GO:0031053 primary miRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0031055 chromatin remodeling at centromere IEP Predict GO terms from Neighborhoods
CC GO:0031207 Sec62/Sec63 complex IEP Predict GO terms from Neighborhoods
CC GO:0031213 RSF complex IEP Predict GO terms from Neighborhoods
BP GO:0031214 biomineral tissue development IEP Predict GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031324 negative regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031325 positive regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031331 positive regulation of cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031334 positive regulation of protein-containing complex assembly IEP Predict GO terms from Neighborhoods
CC GO:0031379 RNA-directed RNA polymerase complex IEP Predict GO terms from Neighborhoods
BP GO:0031554 regulation of termination of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0031577 spindle checkpoint signaling IEP Predict GO terms from Neighborhoods
CC GO:0031594 neuromuscular junction IEP Predict GO terms from Neighborhoods
BP GO:0031848 protection from non-homologous end joining at telomere IEP Predict GO terms from Neighborhoods
BP GO:0032268 regulation of cellular protein metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0032781 positive regulation of ATP-dependent activity IEP Predict GO terms from Neighborhoods
BP GO:0032984 protein-containing complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0032986 protein-DNA complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0032988 ribonucleoprotein complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0033046 negative regulation of sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033120 positive regulation of RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0034248 regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0034336 misfolded RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0034501 protein localization to kinetochore IEP Predict GO terms from Neighborhoods
BP GO:0034502 protein localization to chromosome IEP Predict GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0034708 methyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Predict GO terms from Neighborhoods
BP GO:0035041 sperm DNA decondensation IEP Predict GO terms from Neighborhoods
BP GO:0035063 nuclear speck organization IEP Predict GO terms from Neighborhoods
BP GO:0035076 ecdysone receptor-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0035092 sperm DNA condensation IEP Predict GO terms from Neighborhoods
BP GO:0035196 miRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0036310 ATP-dependent DNA/DNA annealing activity IEP Predict GO terms from Neighborhoods
CC GO:0036396 RNA N6-methyladenosine methyltransferase complex IEP Predict GO terms from Neighborhoods
CC GO:0036452 ESCRT complex IEP Predict GO terms from Neighborhoods
BP GO:0039702 viral budding via host ESCRT complex IEP Predict GO terms from Neighborhoods
BP GO:0040021 hermaphrodite germ-line sex determination IEP Predict GO terms from Neighborhoods
BP GO:0040022 feminization of hermaphroditic germ-line IEP Predict GO terms from Neighborhoods
BP GO:0040026 positive regulation of vulval development IEP Predict GO terms from Neighborhoods
BP GO:0040028 regulation of vulval development IEP Predict GO terms from Neighborhoods
BP GO:0040031 snRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0042059 negative regulation of epidermal growth factor receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0042689 regulation of crystal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0042691 positive regulation of crystal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0042766 obsolete nucleosome mobilization IEP Predict GO terms from Neighborhoods
CC GO:0042995 cell projection IEP Predict GO terms from Neighborhoods
CC GO:0043005 neuron projection IEP Predict GO terms from Neighborhoods
MF GO:0043008 ATP-dependent protein binding IEP Predict GO terms from Neighborhoods
CC GO:0043025 neuronal cell body IEP Predict GO terms from Neighborhoods
CC GO:0043197 dendritic spine IEP Predict GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
BP GO:0043247 telomere maintenance in response to DNA damage IEP Predict GO terms from Neighborhoods
BP GO:0043254 regulation of protein-containing complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0043484 regulation of RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0043487 regulation of RNA stability IEP Predict GO terms from Neighborhoods
BP GO:0043488 regulation of mRNA stability IEP Predict GO terms from Neighborhoods
MF GO:0043522 leucine zipper domain binding IEP Predict GO terms from Neighborhoods
BP GO:0043523 regulation of neuron apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043524 negative regulation of neuron apoptotic process IEP Predict GO terms from Neighborhoods
CC GO:0043596 nuclear replication fork IEP Predict GO terms from Neighborhoods
CC GO:0043679 axon terminus IEP Predict GO terms from Neighborhoods
BP GO:0043936 asexual sporulation resulting in formation of a cellular spore IEP Predict GO terms from Neighborhoods
BP GO:0044087 regulation of cellular component biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0044089 positive regulation of cellular component biogenesis IEP Predict GO terms from Neighborhoods
CC GO:0044297 cell body IEP Predict GO terms from Neighborhoods
CC GO:0044305 calyx of Held IEP Predict GO terms from Neighborhoods
CC GO:0044306 neuron projection terminus IEP Predict GO terms from Neighborhoods
CC GO:0044309 neuron spine IEP Predict GO terms from Neighborhoods
BP GO:0044344 cellular response to fibroblast growth factor stimulus IEP Predict GO terms from Neighborhoods
BP GO:0044396 actin cortical patch organization IEP Predict GO terms from Neighborhoods
BP GO:0044409 entry into host IEP Predict GO terms from Neighborhoods
BP GO:0044782 cilium organization IEP Predict GO terms from Neighborhoods
BP GO:0044839 cell cycle G2/M phase transition IEP Predict GO terms from Neighborhoods
CC GO:0044853 plasma membrane raft IEP Predict GO terms from Neighborhoods
BP GO:0045047 protein targeting to ER IEP Predict GO terms from Neighborhoods
CC GO:0045171 intercellular bridge IEP Predict GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Predict GO terms from Neighborhoods
CC GO:0045202 synapse IEP Predict GO terms from Neighborhoods
BP GO:0045292 mRNA cis splicing, via spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0045293 mRNA editing complex IEP Predict GO terms from Neighborhoods
BP GO:0045610 regulation of hemocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045612 positive regulation of hemocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045694 regulation of embryo sac egg cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045727 positive regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0045738 negative regulation of DNA repair IEP Predict GO terms from Neighborhoods
BP GO:0045807 positive regulation of endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP Predict GO terms from Neighborhoods
BP GO:0045892 negative regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0046020 obsolete negative regulation of transcription from RNA polymerase II promoter by pheromones IEP Predict GO terms from Neighborhoods
BP GO:0046439 L-cysteine metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predict GO terms from Neighborhoods
BP GO:0046718 viral entry into host cell IEP Predict GO terms from Neighborhoods
BP GO:0046755 viral budding IEP Predict GO terms from Neighborhoods
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
MF GO:0048306 calcium-dependent protein binding IEP Predict GO terms from Neighborhoods
BP GO:0048468 cell development IEP Predict GO terms from Neighborhoods
CC GO:0048471 perinuclear region of cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:0048488 synaptic vesicle endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0048513 animal organ development IEP Predict GO terms from Neighborhoods
BP GO:0048518 positive regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0048519 negative regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0048522 positive regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0048523 negative regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0048583 regulation of response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0048644 muscle organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048708 astrocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048863 stem cell differentiation IEP Predict GO terms from Neighborhoods
MF GO:0050265 RNA uridylyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0050684 regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0050730 regulation of peptidyl-tyrosine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0050732 negative regulation of peptidyl-tyrosine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0050779 RNA destabilization IEP Predict GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0051105 regulation of DNA ligation IEP Predict GO terms from Neighborhoods
BP GO:0051107 negative regulation of DNA ligation IEP Predict GO terms from Neighborhoods
BP GO:0051128 regulation of cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0051129 negative regulation of cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0051130 positive regulation of cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051248 negative regulation of protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051253 negative regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051254 positive regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051340 regulation of ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0051352 negative regulation of ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0051896 regulation of protein kinase B signaling IEP Predict GO terms from Neighborhoods
BP GO:0051897 positive regulation of protein kinase B signaling IEP Predict GO terms from Neighborhoods
BP GO:0051928 positive regulation of calcium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0060019 radial glial cell differentiation IEP Predict GO terms from Neighborhoods
MF GO:0060090 molecular adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:0060123 regulation of growth hormone secretion IEP Predict GO terms from Neighborhoods
BP GO:0060124 positive regulation of growth hormone secretion IEP Predict GO terms from Neighborhoods
BP GO:0060142 regulation of syncytium formation by plasma membrane fusion IEP Predict GO terms from Neighborhoods
BP GO:0060143 positive regulation of syncytium formation by plasma membrane fusion IEP Predict GO terms from Neighborhoods
BP GO:0060147 regulation of post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0060148 positive regulation of post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0060149 negative regulation of post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
CC GO:0060170 ciliary membrane IEP Predict GO terms from Neighborhoods
BP GO:0060194 regulation of antisense RNA transcription IEP Predict GO terms from Neighborhoods
BP GO:0060195 negative regulation of antisense RNA transcription IEP Predict GO terms from Neighborhoods
BP GO:0060218 hematopoietic stem cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0060271 cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:0060303 obsolete regulation of nucleosome density IEP Predict GO terms from Neighborhoods
BP GO:0060548 negative regulation of cell death IEP Predict GO terms from Neighborhoods
BP GO:0060567 negative regulation of termination of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0060627 regulation of vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0060964 regulation of miRNA-mediated gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0060966 regulation of gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0060967 negative regulation of gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0060998 regulation of dendritic spine development IEP Predict GO terms from Neighborhoods
BP GO:0060999 positive regulation of dendritic spine development IEP Predict GO terms from Neighborhoods
BP GO:0061013 regulation of mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0061014 positive regulation of mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0061077 chaperone-mediated protein folding IEP Predict GO terms from Neighborhoods
BP GO:0061097 regulation of protein tyrosine kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0061099 negative regulation of protein tyrosine kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0061157 mRNA destabilization IEP Predict GO terms from Neighborhoods
BP GO:0061587 transfer RNA gene-mediated silencing IEP Predict GO terms from Neighborhoods
BP GO:0061780 mitotic cohesin loading IEP Predict GO terms from Neighborhoods
CC GO:0061827 sperm head IEP Predict GO terms from Neighborhoods
BP GO:0062176 R-loop disassembly IEP Predict GO terms from Neighborhoods
BP GO:0065007 biological regulation IEP Predict GO terms from Neighborhoods
MF GO:0070064 proline-rich region binding IEP Predict GO terms from Neighborhoods
MF GO:0070569 uridylyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0070577 lysine-acetylated histone binding IEP Predict GO terms from Neighborhoods
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predict GO terms from Neighborhoods
BP GO:0070669 response to interleukin-2 IEP Predict GO terms from Neighborhoods
MF GO:0070742 C2H2 zinc finger domain binding IEP Predict GO terms from Neighborhoods
BP GO:0070918 small regulatory ncRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0070920 regulation of production of small RNA involved in gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0070921 regulation of siRNA production IEP Predict GO terms from Neighborhoods
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0071005 U2-type precatalytic spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071006 U2-type catalytic step 1 spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071008 U2-type post-mRNA release spliceosomal complex IEP Predict GO terms from Neighborhoods
CC GO:0071011 precatalytic spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071012 catalytic step 1 spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071020 post-spliceosomal complex IEP Predict GO terms from Neighborhoods
CC GO:0071021 U2-type post-spliceosomal complex IEP Predict GO terms from Neighborhoods
BP GO:0071076 RNA 3' uridylation IEP Predict GO terms from Neighborhoods
BP GO:0071168 protein localization to chromatin IEP Predict GO terms from Neighborhoods
BP GO:0071173 spindle assembly checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0071174 mitotic spindle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0071280 cellular response to copper ion IEP Predict GO terms from Neighborhoods
BP GO:0071345 cellular response to cytokine stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071352 cellular response to interleukin-2 IEP Predict GO terms from Neighborhoods
BP GO:0071459 protein localization to chromosome, centromeric region IEP Predict GO terms from Neighborhoods
CC GO:0071564 npBAF complex IEP Predict GO terms from Neighborhoods
CC GO:0071565 nBAF complex IEP Predict GO terms from Neighborhoods
BP GO:0071774 response to fibroblast growth factor IEP Predict GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex subunit organization IEP Predict GO terms from Neighborhoods
BP GO:0071921 cohesin loading IEP Predict GO terms from Neighborhoods
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0080009 mRNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0080146 L-cysteine desulfhydrase activity IEP Predict GO terms from Neighborhoods
BP GO:0086036 regulation of cardiac muscle cell membrane potential IEP Predict GO terms from Neighborhoods
BP GO:0090083 regulation of inclusion body assembly IEP Predict GO terms from Neighborhoods
BP GO:0090084 negative regulation of inclusion body assembly IEP Predict GO terms from Neighborhoods
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEP Predict GO terms from Neighborhoods
CC GO:0090537 CERF complex IEP Predict GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Predict GO terms from Neighborhoods
BP GO:0097201 negative regulation of transcription from RNA polymerase II promoter in response to stress IEP Predict GO terms from Neighborhoods
BP GO:0097320 plasma membrane tubulation IEP Predict GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Predict GO terms from Neighborhoods
CC GO:0097431 mitotic spindle pole IEP Predict GO terms from Neighborhoods
CC GO:0097440 apical dendrite IEP Predict GO terms from Neighborhoods
CC GO:0097525 spliceosomal snRNP complex IEP Predict GO terms from Neighborhoods
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predict GO terms from Neighborhoods
CC GO:0098563 intrinsic component of synaptic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0098687 chromosomal region IEP Predict GO terms from Neighborhoods
BP GO:0098693 regulation of synaptic vesicle cycle IEP Predict GO terms from Neighborhoods
CC GO:0098794 postsynapse IEP Predict GO terms from Neighborhoods
CC GO:0098833 presynaptic endocytic zone IEP Predict GO terms from Neighborhoods
CC GO:0098871 postsynaptic actin cytoskeleton IEP Predict GO terms from Neighborhoods
CC GO:0098978 glutamatergic synapse IEP Predict GO terms from Neighborhoods
CC GO:0098993 anchored component of synaptic vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0099159 regulation of modification of postsynaptic structure IEP Predict GO terms from Neighborhoods
CC GO:0099524 postsynaptic cytosol IEP Predict GO terms from Neighborhoods
CC GO:0099571 postsynaptic cytoskeleton IEP Predict GO terms from Neighborhoods
MF GO:0102802 thebaine 6-O-demethylase activity IEP Predict GO terms from Neighborhoods
MF GO:0102805 codeine O-demethylase activity IEP Predict GO terms from Neighborhoods
BP GO:0110148 biomineralization IEP Predict GO terms from Neighborhoods
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Predict GO terms from Neighborhoods
CC GO:0120114 Sm-like protein family complex IEP Predict GO terms from Neighborhoods
MF GO:0140033 acetylation-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Predict GO terms from Neighborhoods
CC GO:0140220 pathogen-containing vacuole IEP Predict GO terms from Neighborhoods
BP GO:0140238 presynaptic endocytosis IEP Predict GO terms from Neighborhoods
MF GO:0140463 chromatin-protein adaptor activity IEP Predict GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Predict GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Predict GO terms from Neighborhoods
MF GO:0140666 annealing activity IEP Predict GO terms from Neighborhoods
BP GO:0140747 regulation of ncRNA transcription IEP Predict GO terms from Neighborhoods
BP GO:1900036 positive regulation of cellular response to heat IEP Predict GO terms from Neighborhoods
BP GO:1900368 regulation of post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:1900369 negative regulation of post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:1900370 positive regulation of post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:1901021 positive regulation of calcium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1901185 negative regulation of ERBB signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1901214 regulation of neuron death IEP Predict GO terms from Neighborhoods
BP GO:1901215 negative regulation of neuron death IEP Predict GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Predict GO terms from Neighborhoods
BP GO:1901385 regulation of voltage-gated calcium channel activity IEP Predict GO terms from Neighborhoods
BP GO:1901387 positive regulation of voltage-gated calcium channel activity IEP Predict GO terms from Neighborhoods
BP GO:1901533 negative regulation of hematopoietic progenitor cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:1901739 regulation of myoblast fusion IEP Predict GO terms from Neighborhoods
BP GO:1901741 positive regulation of myoblast fusion IEP Predict GO terms from Neighborhoods
BP GO:1901988 negative regulation of cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902188 obsolete positive regulation of viral release from host cell IEP Predict GO terms from Neighborhoods
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903083 protein localization to condensed chromosome IEP Predict GO terms from Neighborhoods
BP GO:1903241 U2-type prespliceosome assembly IEP Predict GO terms from Neighborhoods
BP GO:1903311 regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903313 positive regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1903705 positive regulation of siRNA production IEP Predict GO terms from Neighborhoods
BP GO:1903779 regulation of cardiac conduction IEP Predict GO terms from Neighborhoods
BP GO:1903798 regulation of miRNA maturation IEP Predict GO terms from Neighborhoods
BP GO:1903800 positive regulation of miRNA maturation IEP Predict GO terms from Neighborhoods
BP GO:1904427 positive regulation of calcium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1904567 response to wortmannin IEP Predict GO terms from Neighborhoods
BP GO:1904568 cellular response to wortmannin IEP Predict GO terms from Neighborhoods
BP GO:1904875 regulation of DNA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:1904876 negative regulation of DNA ligase activity IEP Predict GO terms from Neighborhoods
CC GO:1904949 ATPase complex IEP Predict GO terms from Neighborhoods
BP GO:1905244 regulation of modification of synaptic structure IEP Predict GO terms from Neighborhoods
BP GO:1905274 regulation of modification of postsynaptic actin cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:1905819 negative regulation of chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1990074 polyuridylation-dependent mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1990182 exosomal secretion IEP Predict GO terms from Neighborhoods
CC GO:1990234 transferase complex IEP Predict GO terms from Neighborhoods
BP GO:1990637 response to prolactin IEP Predict GO terms from Neighborhoods
BP GO:1990646 cellular response to prolactin IEP Predict GO terms from Neighborhoods
MF GO:1990814 DNA/DNA annealing activity IEP Predict GO terms from Neighborhoods
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000272 negative regulation of signaling receptor activity IEP Predict GO terms from Neighborhoods
BP GO:2000395 regulation of ubiquitin-dependent endocytosis IEP Predict GO terms from Neighborhoods
BP GO:2000397 positive regulation of ubiquitin-dependent endocytosis IEP Predict GO terms from Neighborhoods
BP GO:2000634 regulation of primary miRNA processing IEP Predict GO terms from Neighborhoods
BP GO:2000636 positive regulation of primary miRNA processing IEP Predict GO terms from Neighborhoods
BP GO:2000637 positive regulation of miRNA-mediated gene silencing IEP Predict GO terms from Neighborhoods
BP GO:2000780 negative regulation of double-strand break repair IEP Predict GO terms from Neighborhoods
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP Predict GO terms from Neighborhoods
BP GO:2001032 regulation of double-strand break repair via nonhomologous end joining IEP Predict GO terms from Neighborhoods
BP GO:2001033 negative regulation of double-strand break repair via nonhomologous end joining IEP Predict GO terms from Neighborhoods
BP GO:2001135 regulation of endocytic recycling IEP Predict GO terms from Neighborhoods
BP GO:2001137 positive regulation of endocytic recycling IEP Predict GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2001259 positive regulation of cation channel activity IEP Predict GO terms from Neighborhoods
BP GO:2001286 regulation of caveolin-mediated endocytosis IEP Predict GO terms from Neighborhoods
BP GO:2001288 positive regulation of caveolin-mediated endocytosis IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011990 TPR-like_helical_dom_sf 507 668
IPR011990 TPR-like_helical_dom_sf 677 756
IPR011990 TPR-like_helical_dom_sf 17 69
IPR011990 TPR-like_helical_dom_sf 88 187
IPR011990 TPR-like_helical_dom_sf 242 488
No external refs found!