SOLTUB.AGRIA.G00000029091


Description : Protein yabby 4


Gene families : OG_02_0016255 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000029091
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_164


Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEA AHRD
MF GO:0003700 DNA-binding transcription factor activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
BP GO:0006355 regulation of DNA-templated transcription IEA AHRD
BP GO:0009909 regulation of flower development IEA AHRD
BP GO:0009933 meristem structural organization IEA AHRD
BP GO:0009944 polarity specification of adaxial/abaxial axis IEA AHRD
BP GO:0010022 meristem determinacy IEA AHRD
BP GO:0010093 specification of floral organ identity IEA AHRD
BP GO:0010154 fruit development IEA AHRD
BP GO:0010158 abaxial cell fate specification IEA AHRD
BP GO:0010450 inflorescence meristem growth IEA AHRD
BP GO:0048481 plant ovule development IEA AHRD
BP GO:0048833 specification of floral organ number IEA AHRD
BP GO:0090706 specification of plant organ position IEA AHRD
BP GO:1902183 regulation of shoot apical meristem development IEA AHRD
BP GO:2000024 regulation of leaf development IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predict GO terms from Neighborhoods
BP GO:0001676 long-chain fatty acid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity IEP Predict GO terms from Neighborhoods
MF GO:0004467 long-chain fatty acid-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0005112 Notch binding IEP Predict GO terms from Neighborhoods
CC GO:0005741 mitochondrial outer membrane IEP Predict GO terms from Neighborhoods
CC GO:0005768 endosome IEP Predict GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0005802 trans-Golgi network IEP Predict GO terms from Neighborhoods
CC GO:0005947 mitochondrial alpha-ketoglutarate dehydrogenase complex IEP Predict GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006575 cellular modified amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006644 phospholipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006750 glutathione biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006751 glutathione catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006790 sulfur compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006805 xenobiotic metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006949 syncytium formation IEP Predict GO terms from Neighborhoods
BP GO:0007405 neuroblast proliferation IEP Predict GO terms from Neighborhoods
BP GO:0007584 response to nutrient IEP Predict GO terms from Neighborhoods
MF GO:0008168 methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0008593 regulation of Notch signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0008654 phospholipid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0008677 2-dehydropantoate 2-reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0009081 branched-chain amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009083 branched-chain amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009314 response to radiation IEP Predict GO terms from Neighborhoods
BP GO:0009416 response to light stimulus IEP Predict GO terms from Neighborhoods
CC GO:0009505 plant-type cell wall IEP Predict GO terms from Neighborhoods
BP GO:0009648 photoperiodism IEP Predict GO terms from Neighborhoods
BP GO:0009664 plant-type cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0009719 response to endogenous stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Predict GO terms from Neighborhoods
BP GO:0009741 response to brassinosteroid IEP Predict GO terms from Neighborhoods
BP GO:0009744 response to sucrose IEP Predict GO terms from Neighborhoods
BP GO:0009791 post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0009827 plant-type cell wall modification IEP Predict GO terms from Neighborhoods
BP GO:0009828 plant-type cell wall loosening IEP Predict GO terms from Neighborhoods
BP GO:0009910 negative regulation of flower development IEP Predict GO terms from Neighborhoods
BP GO:0009913 epidermal cell differentiation IEP Predict GO terms from Neighborhoods
CC GO:0010009 cytoplasmic side of endosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0010143 cutin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010243 response to organonitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:0010288 response to lead ion IEP Predict GO terms from Neighborhoods
BP GO:0010311 lateral root formation IEP Predict GO terms from Neighborhoods
BP GO:0010358 leaf shaping IEP Predict GO terms from Neighborhoods
BP GO:0010393 galacturonan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010497 plasmodesmata-mediated intercellular transport IEP Predict GO terms from Neighborhoods
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010746 regulation of long-chain fatty acid import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0010747 positive regulation of long-chain fatty acid import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0010866 regulation of triglyceride biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010867 positive regulation of triglyceride biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010955 negative regulation of protein processing IEP Predict GO terms from Neighborhoods
BP GO:0010976 positive regulation of neuron projection development IEP Predict GO terms from Neighborhoods
BP GO:0014070 response to organic cyclic compound IEP Predict GO terms from Neighborhoods
MF GO:0015645 fatty acid ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0015939 pantothenate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0015940 pantothenate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016024 CDP-diacylglycerol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016143 S-glycoside metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016405 CoA-ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predict GO terms from Neighborhoods
MF GO:0016840 carbon-nitrogen lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016842 amidine-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predict GO terms from Neighborhoods
MF GO:0016878 acid-thiol ligase activity IEP Predict GO terms from Neighborhoods
CC GO:0017086 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) complex IEP Predict GO terms from Neighborhoods
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019757 glycosinolate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019760 glucosinolate metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Predict GO terms from Neighborhoods
BP GO:0022008 neurogenesis IEP Predict GO terms from Neighborhoods
CC GO:0030062 mitochondrial tricarboxylic acid cycle enzyme complex IEP Predict GO terms from Neighborhoods
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0031957 very long-chain fatty acid-CoA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0031960 response to corticosteroid IEP Predict GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Predict GO terms from Neighborhoods
CC GO:0031968 organelle outer membrane IEP Predict GO terms from Neighborhoods
CC GO:0031984 organelle subcompartment IEP Predict GO terms from Neighborhoods
BP GO:0032259 methylation IEP Predict GO terms from Neighborhoods
BP GO:0032368 regulation of lipid transport IEP Predict GO terms from Neighborhoods
BP GO:0032370 positive regulation of lipid transport IEP Predict GO terms from Neighborhoods
BP GO:0032869 cellular response to insulin stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032890 regulation of organic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0032892 positive regulation of organic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0033993 response to lipid IEP Predict GO terms from Neighborhoods
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034201 response to oleic acid IEP Predict GO terms from Neighborhoods
BP GO:0034285 response to disaccharide IEP Predict GO terms from Neighborhoods
BP GO:0035336 long-chain fatty-acyl-CoA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035337 fatty-acyl-CoA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035338 long-chain fatty-acyl-CoA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0035384 thioester biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0036314 response to sterol IEP Predict GO terms from Neighborhoods
MF GO:0042171 lysophosphatidic acid acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0042178 xenobiotic catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042219 cellular modified amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042545 cell wall modification IEP Predict GO terms from Neighborhoods
BP GO:0042546 cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0043171 peptide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043476 pigment accumulation IEP Predict GO terms from Neighborhoods
BP GO:0043478 pigment accumulation in response to UV light IEP Predict GO terms from Neighborhoods
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP Predict GO terms from Neighborhoods
BP GO:0043480 pigment accumulation in tissues IEP Predict GO terms from Neighborhoods
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP Predict GO terms from Neighborhoods
BP GO:0043603 cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043617 cellular response to sucrose starvation IEP Predict GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0044272 sulfur compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044273 sulfur compound catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0045239 tricarboxylic acid cycle enzyme complex IEP Predict GO terms from Neighborhoods
CC GO:0045240 dihydrolipoyl dehydrogenase complex IEP Predict GO terms from Neighborhoods
BP GO:0045488 pectin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045746 negative regulation of Notch signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0045892 negative regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046341 CDP-diacylglycerol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046949 fatty-acyl-CoA biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0047101 2-oxoisovalerate dehydrogenase (acylating) activity IEP Predict GO terms from Neighborhoods
MF GO:0047676 arachidonate-CoA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0048364 root development IEP Predict GO terms from Neighborhoods
BP GO:0048497 maintenance of floral organ identity IEP Predict GO terms from Neighborhoods
BP GO:0048527 lateral root development IEP Predict GO terms from Neighborhoods
BP GO:0048528 post-embryonic root development IEP Predict GO terms from Neighborhoods
BP GO:0048545 response to steroid hormone IEP Predict GO terms from Neighborhoods
BP GO:0048573 photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048581 negative regulation of post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0048764 trichoblast maturation IEP Predict GO terms from Neighborhoods
BP GO:0048765 root hair cell differentiation IEP Predict GO terms from Neighborhoods
MF GO:0050197 phytanate-CoA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0050764 regulation of phagocytosis IEP Predict GO terms from Neighborhoods
BP GO:0050766 positive regulation of phagocytosis IEP Predict GO terms from Neighborhoods
BP GO:0051093 negative regulation of developmental process IEP Predict GO terms from Neighborhoods
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051253 negative regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051384 response to glucocorticoid IEP Predict GO terms from Neighborhoods
BP GO:0051591 response to cAMP IEP Predict GO terms from Neighborhoods
BP GO:0052546 cell wall pectin metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0055044 symplast IEP Predict GO terms from Neighborhoods
BP GO:0061351 neural precursor cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0070613 regulation of protein processing IEP Predict GO terms from Neighborhoods
BP GO:0070723 response to cholesterol IEP Predict GO terms from Neighborhoods
BP GO:0071375 cellular response to peptide hormone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0071616 acyl-CoA biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0071617 lysophospholipid acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0080113 regulation of seed growth IEP Predict GO terms from Neighborhoods
BP GO:0080167 response to karrikin IEP Predict GO terms from Neighborhoods
BP GO:0090057 root radial pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0090207 regulation of triglyceride metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090208 positive regulation of triglyceride metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090407 organophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0090434 oleoyl-CoA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0090696 post-embryonic plant organ development IEP Predict GO terms from Neighborhoods
BP GO:0090700 maintenance of plant organ identity IEP Predict GO terms from Neighborhoods
CC GO:0098791 Golgi apparatus subcompartment IEP Predict GO terms from Neighborhoods
BP GO:0140212 regulation of long-chain fatty acid import into cell IEP Predict GO terms from Neighborhoods
BP GO:0140214 positive regulation of long-chain fatty acid import into cell IEP Predict GO terms from Neighborhoods
BP GO:1900618 regulation of shoot system morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:1901371 regulation of leaf morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903317 regulation of protein maturation IEP Predict GO terms from Neighborhoods
BP GO:1903318 negative regulation of protein maturation IEP Predict GO terms from Neighborhoods
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1905393 plant organ formation IEP Predict GO terms from Neighborhoods
BP GO:1905421 regulation of plant organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:1905954 positive regulation of lipid localization IEP Predict GO terms from Neighborhoods
BP GO:2000033 regulation of seed dormancy process IEP Predict GO terms from Neighborhoods
BP GO:2000191 regulation of fatty acid transport IEP Predict GO terms from Neighborhoods
BP GO:2000193 positive regulation of fatty acid transport IEP Predict GO terms from Neighborhoods
BP GO:2000242 negative regulation of reproductive process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036910 HMG_box_dom_sf 123 176
IPR006780 YABBY 21 182
No external refs found!