Description : (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
Gene families : OG_02_0016264 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000029103 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_227 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002347 | response to tumor cell | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002357 | defense response to tumor cell | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002532 | production of molecular mediator involved in inflammatory response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002536 | respiratory burst involved in inflammatory response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002679 | respiratory burst involved in defense response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002695 | negative regulation of leukocyte activation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003729 | mRNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003743 | translation initiation factor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003747 | translation release factor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004601 | peroxidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004659 | prenyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005198 | structural molecule activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005575 | cellular_component | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005622 | intracellular anatomical structure | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005840 | ribosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006412 | translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006413 | translational initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006415 | translational termination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006518 | peptide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006541 | glutamine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006542 | glutamine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006782 | protoporphyrinogen IX biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008079 | translation termination factor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008379 | thioredoxin peroxidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008430 | selenium binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008785 | alkyl hydroperoxide reductase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009058 | biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009507 | chloroplast | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009521 | photosystem | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009523 | photosystem II | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009526 | plastid envelope | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009532 | plastid stroma | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009535 | chloroplast thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009536 | plastid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009543 | chloroplast thylakoid lumen | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009570 | chloroplast stroma | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009579 | thylakoid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009657 | plastid organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009668 | plastid membrane organization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009782 | photosystem I antenna complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009842 | cyanelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009941 | chloroplast envelope | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009974 | zeinoxanthin epsilon hydroxylase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009977 | proton motive force dependent protein transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0010007 | magnesium chelatase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010027 | thylakoid membrane organization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010176 | homogentisate phytyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010189 | vitamin E biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010207 | photosystem II assembly | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010291 | carotene beta-ring hydroxylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010304 | PSII associated light-harvesting complex II catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0010319 | stromule | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010354 | homogentisate prenyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010566 | regulation of ketone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010795 | regulation of ubiquinone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015979 | photosynthesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015995 | chlorophyll biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015996 | chlorophyll catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016122 | xanthophyll metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016123 | xanthophyll biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016149 | translation release factor activity, codon specific | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016209 | antioxidant activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016211 | ammonia ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016668 | oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016851 | magnesium chelatase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0017038 | protein import | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018158 | protein oxidation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018171 | peptidyl-cysteine oxidation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019369 | arachidonic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019430 | removal of superoxide radicals | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019676 | ammonia assimilation cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019740 | nitrogen utilization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019843 | rRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022408 | negative regulation of cell-cell adhesion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022411 | cellular component disassembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030193 | regulation of blood coagulation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030194 | positive regulation of blood coagulation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031090 | organelle membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031360 | intrinsic component of thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031361 | integral component of thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031409 | pigment binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031426 | polycistronic mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031664 | regulation of lipopolysaccharide-mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031665 | negative regulation of lipopolysaccharide-mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031967 | organelle envelope | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031969 | chloroplast membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031975 | envelope | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031977 | thylakoid lumen | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031978 | plastid thylakoid lumen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032088 | negative regulation of NF-kappaB transcription factor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032544 | plastid translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032594 | protein transport within lipid bilayer | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032790 | ribosome disassembly | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032843 | hydroperoxide reductase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032943 | mononuclear cell proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0033281 | TAT protein transport complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034256 | chlorophyll(ide) b reductase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0034357 | photosynthetic membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035970 | peptidyl-threonine dephosphorylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042098 | T cell proliferation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042170 | plastid membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042360 | vitamin E metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042362 | fat-soluble vitamin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042440 | pigment metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042651 | thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043022 | ribosome binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043023 | ribosomal large subunit binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043027 | cysteine-type endopeptidase inhibitor activity involved in apoptotic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043028 | cysteine-type endopeptidase regulator activity involved in apoptotic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043604 | amide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043933 | protein-containing complex organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043953 | protein transport by the Tat complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045038 | protein import into chloroplast thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0045182 | translation regulator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045454 | cell redox homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045580 | regulation of T cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045581 | negative regulation of T cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045619 | regulation of lymphocyte differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045620 | negative regulation of lymphocyte differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0046408 | chlorophyll synthetase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046501 | protoporphyrinogen IX metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046651 | lymphocyte proliferation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047134 | protein-disulfide reductase (NAD(P)) activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048538 | thymus development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048564 | photosystem I assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050818 | regulation of coagulation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050820 | positive regulation of coagulation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050866 | negative regulation of cell activation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050868 | negative regulation of T cell activation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050878 | regulation of body fluid levels | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051002 | ligase activity, forming nitrogen-metal bonds | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051003 | ligase activity, forming nitrogen-metal bonds, forming coordination complexes | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051092 | positive regulation of NF-kappaB transcription factor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051250 | negative regulation of lymphocyte activation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051881 | regulation of mitochondrial membrane potential | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051920 | peroxiredoxin activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0055035 | plastid thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061024 | membrane organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061041 | regulation of wound healing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070661 | leukocyte proliferation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0072374 | carotene epsilon hydroxylase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090303 | positive regulation of wound healing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098572 | stromal side of plastid thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098796 | membrane protein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098869 | cellular oxidant detoxification | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0102661 | homogentisate solanyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0110165 | cellular anatomical entity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140824 | thioredoxin-dependent peroxiredoxin activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900046 | regulation of hemostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900048 | positive regulation of hemostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901099 | negative regulation of signal transduction in absence of ligand | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902106 | negative regulation of leukocyte differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903034 | regulation of response to wounding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903036 | positive regulation of response to wounding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903038 | negative regulation of leukocyte cell-cell adhesion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903707 | negative regulation of hemopoiesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990748 | cellular detoxification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000377 | regulation of reactive oxygen species metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001236 | regulation of extrinsic apoptotic signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001237 | negative regulation of extrinsic apoptotic signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001239 | regulation of extrinsic apoptotic signaling pathway in absence of ligand | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001240 | negative regulation of extrinsic apoptotic signaling pathway in absence of ligand | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |