SOLTUB.AGRIA.G00000029290

Description : Ubiquitin-conjugating enzyme

Gene families : OG_02_0016304 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000029290
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_220

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEA	AHRD
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0000209	protein polyubiquitination	None	Extended
CC	GO:0000329	fungal-type vacuole membrane	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005524	ATP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005774	vacuolar membrane	None	Extended
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006109	regulation of carbohydrate metabolic process	None	Extended
BP	GO:0006111	regulation of gluconeogenesis	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006301	postreplication repair	IEA	AHRD
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	None	Extended
BP	GO:0006623	protein targeting to vacuole	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0007034	vacuolar transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	None	Extended
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	None	Extended
BP	GO:0010677	negative regulation of cellular carbohydrate metabolic process	None	Extended
BP	GO:0010906	regulation of glucose metabolic process	None	Extended
BP	GO:0010994	free ubiquitin chain polymerization	IEA	AHRD
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016567	protein ubiquitination	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
CC	GO:0031371	ubiquitin conjugating enzyme complex	IEA	AHRD
MF	GO:0031625	ubiquitin protein ligase binding	IEA	AHRD
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043255	regulation of carbohydrate biosynthetic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
MF	GO:0044389	ubiquitin-like protein ligase binding	None	Extended
BP	GO:0044395	protein targeting to vacuolar membrane	IEA	AHRD
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0045721	negative regulation of gluconeogenesis	IEA	AHRD
BP	GO:0045912	negative regulation of carbohydrate metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046686	response to cadmium ion	None	Extended
BP	GO:0046689	response to mercury ion	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051258	protein polymerization	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0051865	protein autoubiquitination	IEA	AHRD
MF	GO:0061630	ubiquitin protein ligase activity	IEA	AHRD
MF	GO:0061631	ubiquitin conjugating enzyme activity	IEA	AHRD
MF	GO:0061650	ubiquitin-like protein conjugating enzyme activity	None	Extended
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
BP	GO:0062012	regulation of small molecule metabolic process	None	Extended
BP	GO:0062014	negative regulation of small molecule metabolic process	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0070936	protein K48-linked ubiquitination	IEA	AHRD
BP	GO:0070979	protein K11-linked ubiquitination	IEA	AHRD
BP	GO:0071241	cellular response to inorganic substance	None	Extended
BP	GO:0071248	cellular response to metal ion	None	Extended
BP	GO:0071276	cellular response to cadmium ion	IEA	AHRD
BP	GO:0071288	cellular response to mercury ion	IEA	AHRD
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0072665	protein localization to vacuole	None	Extended
BP	GO:0072666	establishment of protein localization to vacuole	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098852	lytic vacuole membrane	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
BP	GO:1903778	protein localization to vacuolar membrane	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005958	DNA-dependent protein kinase-DNA ligase 4 complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006266	DNA ligation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006302	double-strand break repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0006303	double-strand break repair via nonhomologous end joining	IEP	Predict GO terms from Neighborhoods
BP	GO:0006310	DNA recombination	IEP	Predict GO terms from Neighborhoods
BP	GO:0006457	protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006458	'de novo' protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0009314	response to radiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009410	response to xenobiotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009628	response to abiotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009893	positive regulation of metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010165	response to X-ray	IEP	Predict GO terms from Neighborhoods
BP	GO:0010212	response to ionizing radiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010449	root meristem growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0031072	heat shock protein binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0032807	DNA ligase IV complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0035266	meristem growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0043085	positive regulation of catalytic activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051084	'de novo' post-translational protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051085	chaperone cofactor-dependent protein refolding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051087	chaperone binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051103	DNA ligation involved in DNA repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0051131	chaperone-mediated protein complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0051340	regulation of ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051351	positive regulation of ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051606	detection of stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0051879	Hsp90 protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0061077	chaperone-mediated protein folding	IEP	Predict GO terms from Neighborhoods
CC	GO:0070419	nonhomologous end joining complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0080036	regulation of cytokinin-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0080037	negative regulation of cytokinin-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0080183	response to photooxidative stress	IEP	Predict GO terms from Neighborhoods
CC	GO:0101031	chaperone complex	IEP	Predict GO terms from Neighborhoods
CC	GO:1990391	DNA repair complex	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR016135	UBQ-conjugating_enzyme/RWD	4	149
IPR000608	UBQ-conjugat_E2	10	142

External Links

No external refs found!

SOLTUB.AGRIA.G00000029290

Expression Profile

Co-expression Networks

Functional Annotation