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  5. SOLTUB.AGRIA.G00000029391

SOLTUB.AGRIA.G00000029391


Description : RING/U-box superfamily protein, putative


Gene families : OG_02_0020703 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000029391
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_208


Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA AHRD
MF GO:0005488 binding IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0010200 response to chitin IEA AHRD
BP GO:0016567 protein ubiquitination IEA AHRD
BP GO:0042742 defense response to bacterium IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0002221 pattern recognition receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0002573 myeloid leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0002683 negative regulation of immune system process IEP Predict GO terms from Neighborhoods
BP GO:0002831 regulation of response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0002832 negative regulation of response to biotic stimulus IEP Predict GO terms from Neighborhoods
MF GO:0003680 minor groove of adenine-thymine-rich DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Predict GO terms from Neighborhoods
MF GO:0003700 DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0004398 histidine decarboxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0004525 ribonuclease III activity IEP Predict GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005522 profilin binding IEP Predict GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Predict GO terms from Neighborhoods
CC GO:0005829 cytosol IEP Predict GO terms from Neighborhoods
CC GO:0005911 cell-cell junction IEP Predict GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006353 DNA-templated transcription termination IEP Predict GO terms from Neighborhoods
BP GO:0006366 transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0006580 ethanolamine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006631 fatty acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006690 icosanoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007231 osmosensory signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007293 germarium-derived egg chamber formation IEP Predict GO terms from Neighborhoods
BP GO:0007417 central nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0007586 digestion IEP Predict GO terms from Neighborhoods
BP GO:0007623 circadian rhythm IEP Predict GO terms from Neighborhoods
MF GO:0008127 quercetin 2,3-dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0008272 sulfate transport IEP Predict GO terms from Neighborhoods
BP GO:0008544 epidermis development IEP Predict GO terms from Neighborhoods
BP GO:0008652 cellular amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid family metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009423 chorismate biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009506 plasmodesma IEP Predict GO terms from Neighborhoods
CC GO:0009534 chloroplast thylakoid IEP Predict GO terms from Neighborhoods
BP GO:0009555 pollen development IEP Predict GO terms from Neighborhoods
CC GO:0009579 thylakoid IEP Predict GO terms from Neighborhoods
BP GO:0009606 tropism IEP Predict GO terms from Neighborhoods
BP GO:0009611 response to wounding IEP Predict GO terms from Neighborhoods
BP GO:0009616 RNAi-mediated antiviral immune response IEP Predict GO terms from Neighborhoods
BP GO:0009637 response to blue light IEP Predict GO terms from Neighborhoods
BP GO:0009647 skotomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009652 thigmotropism IEP Predict GO terms from Neighborhoods
BP GO:0009785 blue light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009791 post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0009808 lignin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009809 lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009813 flavonoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP Predict GO terms from Neighborhoods
BP GO:0009970 cellular response to sulfate starvation IEP Predict GO terms from Neighborhoods
BP GO:0010050 vegetative phase change IEP Predict GO terms from Neighborhoods
BP GO:0010150 leaf senescence IEP Predict GO terms from Neighborhoods
BP GO:0010158 abaxial cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010216 maintenance of DNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0010267 ta-siRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0010274 hydrotropism IEP Predict GO terms from Neighborhoods
BP GO:0010337 regulation of salicylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010528 regulation of transposition IEP Predict GO terms from Neighborhoods
BP GO:0010529 negative regulation of transposition IEP Predict GO terms from Neighborhoods
BP GO:0010565 regulation of cellular ketone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010597 green leaf volatile biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010599 lsiRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0014013 regulation of gliogenesis IEP Predict GO terms from Neighborhoods
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predict GO terms from Neighborhoods
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
BP GO:0019216 regulation of lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019217 regulation of fatty acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019336 phenol-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019372 lipoxygenase pathway IEP Predict GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0030054 cell junction IEP Predict GO terms from Neighborhoods
BP GO:0030224 monocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030522 intracellular receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0030834 regulation of actin filament depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0030835 negative regulation of actin filament depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0030837 negative regulation of actin filament polymerization IEP Predict GO terms from Neighborhoods
MF GO:0030957 Tat protein binding IEP Predict GO terms from Neighborhoods
CC GO:0031332 RNAi effector complex IEP Predict GO terms from Neighborhoods
MF GO:0031490 chromatin DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0031663 lipopolysaccharide-mediated signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0031976 plastid thylakoid IEP Predict GO terms from Neighborhoods
BP GO:0032101 regulation of response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032102 negative regulation of response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032272 negative regulation of protein polymerization IEP Predict GO terms from Neighborhoods
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0032787 monocarboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0033759 flavone synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0034785 salicylate 5-hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0035067 negative regulation of histone acetylation IEP Predict GO terms from Neighborhoods
BP GO:0035987 endodermal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0036404 obsolete conversion of ds siRNA to ss siRNA IEP Predict GO terms from Neighborhoods
BP GO:0042304 regulation of fatty acid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0042409 caffeoyl-CoA O-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0042439 ethanolamine-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042440 pigment metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042537 benzene-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043455 regulation of secondary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043648 dicarboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0043680 filiform apparatus IEP Predict GO terms from Neighborhoods
BP GO:0045010 actin nucleation IEP Predict GO terms from Neighborhoods
BP GO:0045595 regulation of cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0046148 pigment biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046244 salicylic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046417 chorismate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046777 protein autophosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0046890 regulation of lipid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0047893 flavonol 3-O-glucosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0048229 gametophyte development IEP Predict GO terms from Neighborhoods
BP GO:0048317 seed morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048367 shoot system development IEP Predict GO terms from Neighborhoods
BP GO:0048440 carpel development IEP Predict GO terms from Neighborhoods
BP GO:0048511 rhythmic process IEP Predict GO terms from Neighborhoods
BP GO:0048519 negative regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0048585 negative regulation of response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0048608 reproductive structure development IEP Predict GO terms from Neighborhoods
BP GO:0048731 system development IEP Predict GO terms from Neighborhoods
BP GO:0048869 cellular developmental process IEP Predict GO terms from Neighborhoods
MF GO:0050275 scopoletin glucosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0050777 negative regulation of immune response IEP Predict GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0050801 ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0050832 defense response to fungus IEP Predict GO terms from Neighborhoods
BP GO:0051016 barbed-end actin filament capping IEP Predict GO terms from Neighborhoods
MF GO:0051019 mitogen-activated protein kinase binding IEP Predict GO terms from Neighborhoods
MF GO:0051213 dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0051214 RNAi-mediated antiviral immunity against RNA virus IEP Predict GO terms from Neighborhoods
BP GO:0051259 protein complex oligomerization IEP Predict GO terms from Neighborhoods
BP GO:0051260 protein homooligomerization IEP Predict GO terms from Neighborhoods
BP GO:0051552 flavone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051553 flavone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051554 flavonol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051555 flavonol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051607 defense response to virus IEP Predict GO terms from Neighborhoods
BP GO:0051693 actin filament capping IEP Predict GO terms from Neighborhoods
BP GO:0055063 sulfate ion homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding IEP Predict GO terms from Neighborhoods
MF GO:0061980 regulatory RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0062012 regulation of small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0065001 specification of axis polarity IEP Predict GO terms from Neighborhoods
CC GO:0070161 anchoring junction IEP Predict GO terms from Neighborhoods
BP GO:0070922 RISC complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0071214 cellular response to abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071478 cellular response to radiation IEP Predict GO terms from Neighborhoods
BP GO:0071482 cellular response to light stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071483 cellular response to blue light IEP Predict GO terms from Neighborhoods
BP GO:0071484 cellular response to light intensity IEP Predict GO terms from Neighborhoods
BP GO:0071486 cellular response to high light intensity IEP Predict GO terms from Neighborhoods
BP GO:0072359 circulatory system development IEP Predict GO terms from Neighborhoods
BP GO:0072505 divalent inorganic anion homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0080046 quercetin 4'-O-glucosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0080060 integument development IEP Predict GO terms from Neighborhoods
MF GO:0080076 caffeoyl CoA:S-adenosyl-L-methionine O-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0080140 regulation of jasmonic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080141 regulation of jasmonic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0080142 regulation of salicylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0090506 axillary shoot meristem initiation IEP Predict GO terms from Neighborhoods
BP GO:0090567 reproductive shoot system development IEP Predict GO terms from Neighborhoods
BP GO:0090693 plant organ senescence IEP Predict GO terms from Neighborhoods
BP GO:0097237 cellular response to toxic substance IEP Predict GO terms from Neighborhoods
BP GO:0097272 ammonium homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0097275 cellular ammonium homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0102802 thebaine 6-O-demethylase activity IEP Predict GO terms from Neighborhoods
MF GO:0102805 codeine O-demethylase activity IEP Predict GO terms from Neighborhoods
BP GO:0104004 cellular response to environmental stimulus IEP Predict GO terms from Neighborhoods
MF GO:0106310 protein serine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0120091 jasmonic acid hydrolase IEP Predict GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0140297 DNA-binding transcription factor binding IEP Predict GO terms from Neighborhoods
BP GO:0140546 defense response to symbiont IEP Predict GO terms from Neighborhoods
BP GO:1900109 regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900111 positive regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900366 negative regulation of defense response to insect IEP Predict GO terms from Neighborhoods
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1900424 regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:1900426 positive regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:1901141 regulation of lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901160 primary amino compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901880 negative regulation of protein depolymerization IEP Predict GO terms from Neighborhoods
BP GO:1902456 regulation of stomatal opening IEP Predict GO terms from Neighborhoods
BP GO:1902458 positive regulation of stomatal opening IEP Predict GO terms from Neighborhoods
BP GO:2000067 regulation of root morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:2000757 negative regulation of peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
BP GO:2000762 regulation of phenylpropanoid metabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001841 Znf_RING 327 370
IPR025287 WAK_GUB 31 100
No external refs found!