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  5. SOLTUB.AGRIA.G00000029454

SOLTUB.AGRIA.G00000029454


Description : Methyltransferase-like protein 17, mitochondrial


Gene families : OG_02_0016330 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000029454
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_241


Type GO Term Name Evidence Source
MF GO:0005488 binding IEA AHRD
CC GO:0005759 mitochondrial matrix IEA AHRD
CC GO:0016020 membrane IEA AHRD
BP GO:0044085 cellular component biogenesis IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000372 Group I intron splicing IEP Predict GO terms from Neighborhoods
BP GO:0000373 Group II intron splicing IEP Predict GO terms from Neighborhoods
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predict GO terms from Neighborhoods
BP GO:0000376 RNA splicing, via transesterification reactions with guanosine as nucleophile IEP Predict GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predict GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0000959 mitochondrial RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000963 mitochondrial RNA processing IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003727 single-stranded RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0008143 poly(A) binding IEP Predict GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0010467 gene expression IEP Predict GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0017069 snRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0022618 ribonucleoprotein complex assembly IEP Predict GO terms from Neighborhoods
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
BP GO:0031426 polycistronic mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042274 ribosomal small subunit biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0048316 seed development IEP Predict GO terms from Neighborhoods
BP GO:0048534 hematopoietic or lymphoid organ development IEP Predict GO terms from Neighborhoods
MF GO:0070717 poly-purine tract binding IEP Predict GO terms from Neighborhoods
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predict GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090615 mitochondrial mRNA processing IEP Predict GO terms from Neighborhoods
CC GO:0097525 spliceosomal snRNP complex IEP Predict GO terms from Neighborhoods
CC GO:0120114 Sm-like protein family complex IEP Predict GO terms from Neighborhoods
BP GO:0140040 mitochondrial polycistronic RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0140053 mitochondrial gene expression IEP Predict GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR029063 SAM-dependent_MTases_sf 121 275
IPR015324 Ribosomal_Rsm22-like 292 502
IPR015324 Ribosomal_Rsm22-like 110 273
No external refs found!