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  5. SOLTUB.AGRIA.G00000029590

SOLTUB.AGRIA.G00000029590


Description : RING/U-box superfamily protein


Gene families : OG_02_0010279 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000029590
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_68

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000029578 No alias RING/U-box superfamily protein 0.05 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000029578 No alias RING/U-box superfamily protein 0.05 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000029578 No alias RING/U-box superfamily protein 0.05 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000902 cell morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0001756 somitogenesis IEP Predict GO terms from Neighborhoods
MF GO:0001872 (1->3)-beta-D-glucan binding IEP Predict GO terms from Neighborhoods
BP GO:0002215 defense response to nematode IEP Predict GO terms from Neighborhoods
BP GO:0002263 cell activation involved in immune response IEP Predict GO terms from Neighborhoods
BP GO:0002285 lymphocyte activation involved in immune response IEP Predict GO terms from Neighborhoods
BP GO:0002312 B cell activation involved in immune response IEP Predict GO terms from Neighborhoods
BP GO:0002313 mature B cell differentiation involved in immune response IEP Predict GO terms from Neighborhoods
BP GO:0002315 marginal zone B cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0002335 mature B cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0002366 leukocyte activation involved in immune response IEP Predict GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predict GO terms from Neighborhoods
MF GO:0004560 alpha-L-fucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0005522 profilin binding IEP Predict GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Predict GO terms from Neighborhoods
CC GO:0005774 vacuolar membrane IEP Predict GO terms from Neighborhoods
CC GO:0005911 cell-cell junction IEP Predict GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005996 monosaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006004 fucose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006073 cellular glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006076 (1->3)-beta-D-glucan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006516 glycoprotein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007131 reciprocal meiotic recombination IEP Predict GO terms from Neighborhoods
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Predict GO terms from Neighborhoods
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008422 beta-glucosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0008593 regulation of Notch signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009251 glucan catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0009505 plant-type cell wall IEP Predict GO terms from Neighborhoods
CC GO:0009506 plasmodesma IEP Predict GO terms from Neighborhoods
BP GO:0009826 unidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0009932 cell tip growth IEP Predict GO terms from Neighborhoods
BP GO:0009952 anterior/posterior pattern specification IEP Predict GO terms from Neighborhoods
BP GO:0010497 plasmodesmata-mediated intercellular transport IEP Predict GO terms from Neighborhoods
MF GO:0015926 glucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0015928 fucosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0016049 cell growth IEP Predict GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016139 glycoside catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predict GO terms from Neighborhoods
BP GO:0019318 hexose metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0030054 cell junction IEP Predict GO terms from Neighborhoods
BP GO:0030098 lymphocyte differentiation IEP Predict GO terms from Neighborhoods
CC GO:0030173 integral component of Golgi membrane IEP Predict GO terms from Neighborhoods
BP GO:0030183 B cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030217 T cell differentiation IEP Predict GO terms from Neighborhoods
MF GO:0030246 carbohydrate binding IEP Predict GO terms from Neighborhoods
MF GO:0030247 polysaccharide binding IEP Predict GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Predict GO terms from Neighborhoods
BP GO:0030832 regulation of actin filament length IEP Predict GO terms from Neighborhoods
BP GO:0030833 regulation of actin filament polymerization IEP Predict GO terms from Neighborhoods
BP GO:0030834 regulation of actin filament depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0030835 negative regulation of actin filament depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0030837 negative regulation of actin filament polymerization IEP Predict GO terms from Neighborhoods
CC GO:0031224 intrinsic component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031225 anchored component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031226 intrinsic component of plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0031228 intrinsic component of Golgi membrane IEP Predict GO terms from Neighborhoods
BP GO:0031333 negative regulation of protein-containing complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0032271 regulation of protein polymerization IEP Predict GO terms from Neighborhoods
BP GO:0032272 negative regulation of protein polymerization IEP Predict GO terms from Neighborhoods
MF GO:0033829 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0035282 segmentation IEP Predict GO terms from Neighborhoods
BP GO:0035825 homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:0040007 growth IEP Predict GO terms from Neighborhoods
BP GO:0042110 T cell activation IEP Predict GO terms from Neighborhoods
BP GO:0042113 B cell activation IEP Predict GO terms from Neighborhoods
MF GO:0042803 protein homodimerization activity IEP Predict GO terms from Neighborhoods
MF GO:0042973 glucan endo-1,3-beta-D-glucosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0044042 glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044247 cellular polysaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044262 cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044264 cellular polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044275 cellular carbohydrate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045010 actin nucleation IEP Predict GO terms from Neighborhoods
BP GO:0045746 negative regulation of Notch signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0046658 anchored component of plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0046983 protein dimerization activity IEP Predict GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Predict GO terms from Neighborhoods
BP GO:0048317 seed morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048589 developmental growth IEP Predict GO terms from Neighborhoods
BP GO:0051016 barbed-end actin filament capping IEP Predict GO terms from Neighborhoods
BP GO:0051273 beta-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051275 beta-glucan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051494 negative regulation of cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0051693 actin filament capping IEP Predict GO terms from Neighborhoods
BP GO:0060560 developmental growth involved in morphogenesis IEP Predict GO terms from Neighborhoods
CC GO:0070161 anchoring junction IEP Predict GO terms from Neighborhoods
BP GO:0071367 cellular response to brassinosteroid stimulus IEP Predict GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Predict GO terms from Neighborhoods
BP GO:0140527 reciprocal homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901658 glycosyl compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901879 regulation of protein depolymerization IEP Predict GO terms from Neighborhoods
BP GO:1901880 negative regulation of protein depolymerization IEP Predict GO terms from Neighborhoods
BP GO:1902366 regulation of Notch signaling pathway involved in somitogenesis IEP Predict GO terms from Neighborhoods
BP GO:1902367 negative regulation of Notch signaling pathway involved in somitogenesis IEP Predict GO terms from Neighborhoods
BP GO:1902904 negative regulation of supramolecular fiber organization IEP Predict GO terms from Neighborhoods
BP GO:1903131 mononuclear cell differentiation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 107 158
No external refs found!