SOLTUB.AGRIA.G00000029683

Description : Cysteine/Histidine-rich C1 domain family protein

Gene families : OG_02_0020728 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000029683
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_42

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0007165	signal transduction	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
CC	GO:0030054	cell junction	IEA	AHRD
BP	GO:0031323	regulation of cellular metabolic process	IEA	AHRD
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	IEA	AHRD
CC	GO:0043229	intracellular organelle	IEA	AHRD
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	Predict GO terms from Neighborhoods
BP	GO:0001906	cell killing	IEP	Predict GO terms from Neighborhoods
MF	GO:0004034	aldose 1-epimerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004097	catechol oxidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004601	peroxidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004650	polygalacturonase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004784	superoxide dismutase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005384	manganese ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005496	steroid binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005576	extracellular region	IEP	Predict GO terms from Neighborhoods
CC	GO:0005618	cell wall	IEP	Predict GO terms from Neighborhoods
CC	GO:0005773	vacuole	IEP	Predict GO terms from Neighborhoods
CC	GO:0005783	endoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
CC	GO:0005794	Golgi apparatus	IEP	Predict GO terms from Neighborhoods
CC	GO:0005911	cell-cell junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0006012	galactose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006801	superoxide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006828	manganese ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006880	intracellular sequestering of iron ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0006950	response to stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0006952	defense response	IEP	Predict GO terms from Neighborhoods
BP	GO:0006970	response to osmotic stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0006972	hyperosmotic response	IEP	Predict GO terms from Neighborhoods
BP	GO:0007043	cell-cell junction assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0009266	response to temperature stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009269	response to desiccation	IEP	Predict GO terms from Neighborhoods
CC	GO:0009277	fungal-type cell wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0009409	response to cold	IEP	Predict GO terms from Neighborhoods
BP	GO:0009414	response to water deprivation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009415	response to water	IEP	Predict GO terms from Neighborhoods
CC	GO:0009505	plant-type cell wall	IEP	Predict GO terms from Neighborhoods
CC	GO:0009506	plasmodesma	IEP	Predict GO terms from Neighborhoods
BP	GO:0009605	response to external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009607	response to biotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009620	response to fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009651	response to salt stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0009664	plant-type cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009806	lignan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009807	lignan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009808	lignin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010035	response to inorganic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0010266	response to vitamin B1	IEP	Predict GO terms from Neighborhoods
BP	GO:0010438	cellular response to sulfur starvation	IEP	Predict GO terms from Neighborhoods
MF	GO:0015485	cholesterol binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0016043	cellular component organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0016209	antioxidant activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016721	oxidoreductase activity, acting on superoxide radicals as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Predict GO terms from Neighborhoods
BP	GO:0019430	removal of superoxide radicals	IEP	Predict GO terms from Neighborhoods
BP	GO:0019748	secondary metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019863	IgE binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019865	immunoglobulin binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0020037	heme binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0030026	cellular manganese ion homeostasis	IEP	Predict GO terms from Neighborhoods
CC	GO:0030312	external encapsulating structure	IEP	Predict GO terms from Neighborhoods
CC	GO:0030445	yeast-form cell wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0031640	killing of cells of another organism	IEP	Predict GO terms from Neighborhoods
MF	GO:0032442	phenylcoumaran benzylic ether reductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0032934	sterol binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0033793	aureusidin synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034329	cell junction assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0034755	iron ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0042538	hyperosmotic salinity response	IEP	Predict GO terms from Neighborhoods
BP	GO:0043207	response to external biotic stimulus	IEP	Predict GO terms from Neighborhoods
CC	GO:0043667	pollen wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	Predict GO terms from Neighborhoods
BP	GO:0045216	cell-cell junction organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0045229	external encapsulating structure organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0045730	respiratory burst	IEP	Predict GO terms from Neighborhoods
MF	GO:0046906	tetrapyrrole binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0046992	oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond	IEP	Predict GO terms from Neighborhoods
MF	GO:0046993	oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0047911	galacturan 1,4-alpha-galacturonidase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0048046	apoplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0048235	pollen sperm cell differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
BP	GO:0050832	defense response to fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:0051238	sequestering of metal ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0051707	response to other organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0055071	manganese ion homeostasis	IEP	Predict GO terms from Neighborhoods
CC	GO:0070161	anchoring junction	IEP	Predict GO terms from Neighborhoods
MF	GO:0070402	NADPH binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0071421	manganese ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0071555	cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0097577	sequestering of iron ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0098542	defense response to other organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0098754	detoxification	IEP	Predict GO terms from Neighborhoods
BP	GO:0098869	cellular oxidant detoxification	IEP	Predict GO terms from Neighborhoods
BP	GO:1901428	regulation of syringal lignin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901430	positive regulation of syringal lignin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901708	(+)-3'-hydroxylarreatricin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901709	(+)-larreatricin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1990748	cellular detoxification	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004146	DC1	125	170
IPR004146	DC1	65	114
IPR004146	DC1	13	55

External Links

No external refs found!

SOLTUB.AGRIA.G00000029683

Expression Profile

Co-expression Networks

Functional Annotation