SOLTUB.AGRIA.G00000029698

Description : C2H2-like zinc finger protein

Gene families : OG_02_0020729 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000029698
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_24

Type	GO Term	Name	Evidence	Source
BP	GO:0003002	regionalization	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	AHRD
MF	GO:0003700	DNA-binding transcription factor activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008361	regulation of cell size	IEA	AHRD
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009755	hormone-mediated signaling pathway	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010093	specification of floral organ identity	IEA	AHRD
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032535	regulation of cellular component size	None	Extended
BP	GO:0042127	regulation of cell population proliferation	IEA	AHRD
BP	GO:0043085	positive regulation of catalytic activity	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044093	positive regulation of molecular function	None	Extended
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048437	floral organ development	None	Extended
BP	GO:0048441	petal development	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048859	formation of anatomical boundary	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051052	regulation of DNA metabolic process	None	Extended
BP	GO:0051054	positive regulation of DNA metabolic process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051338	regulation of transferase activity	None	Extended
BP	GO:0051347	positive regulation of transferase activity	None	Extended
BP	GO:0051972	regulation of telomerase activity	None	Extended
BP	GO:0051973	positive regulation of telomerase activity	IEA	AHRD
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090066	regulation of anatomical structure size	None	Extended
BP	GO:0090691	formation of plant organ boundary	IEA	AHRD
BP	GO:0090701	specification of plant organ identity	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000278	regulation of DNA biosynthetic process	None	Extended
BP	GO:2000573	positive regulation of DNA biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0001101	response to acid chemical	IEP	Predict GO terms from Neighborhoods
BP	GO:0001845	phagolysosome assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0003852	2-isopropylmalate synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003853	2-methylacyl-CoA dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003995	acyl-CoA dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004085	butyryl-CoA dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004565	beta-galactosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004567	beta-mannosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004709	MAP kinase kinase kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004723	calcium-dependent protein serine/threonine phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0005513	detection of calcium ion	IEP	Predict GO terms from Neighborhoods
CC	GO:0005767	secondary lysosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005955	calcineurin complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006195	purine nucleotide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006551	leucine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006552	leucine catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006635	fatty acid beta-oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006790	sulfur compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006971	hypotonic response	IEP	Predict GO terms from Neighborhoods
BP	GO:0006972	hyperosmotic response	IEP	Predict GO terms from Neighborhoods
BP	GO:0007040	lysosome organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007254	JNK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0007260	tyrosine phosphorylation of STAT protein	IEP	Predict GO terms from Neighborhoods
BP	GO:0007263	nitric oxide mediated signal transduction	IEP	Predict GO terms from Neighborhoods
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0008470	isovaleryl-CoA dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009062	fatty acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009083	branched-chain amino acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009098	leucine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009154	purine ribonucleotide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009261	ribonucleotide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009268	response to pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0009414	response to water deprivation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009415	response to water	IEP	Predict GO terms from Neighborhoods
BP	GO:0009636	response to toxic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0009719	response to endogenous stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009725	response to hormone	IEP	Predict GO terms from Neighborhoods
BP	GO:0009733	response to auxin	IEP	Predict GO terms from Neighborhoods
BP	GO:0009744	response to sucrose	IEP	Predict GO terms from Neighborhoods
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009855	determination of bilateral symmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0010035	response to inorganic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0010116	positive regulation of abscisic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0010177	2-(2'-methylthio)ethylmalate synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010332	response to gamma radiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010344	seed oilbody biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010446	response to alkaline pH	IEP	Predict GO terms from Neighborhoods
CC	GO:0012510	trans-Golgi network transport vesicle membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0015923	mannosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015925	galactosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016101	diterpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016102	diterpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016114	terpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016143	S-glycoside metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0016514	SWI/SNF complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0016567	protein ubiquitination	IEP	Predict GO terms from Neighborhoods
MF	GO:0016740	transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0018108	peptidyl-tyrosine phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0018212	peptidyl-tyrosine modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0019605	butyrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019626	short-chain fatty acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019748	secondary metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019757	glycosinolate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019760	glucosinolate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019932	second-messenger-mediated signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0030007	cellular potassium ion homeostasis	IEP	Predict GO terms from Neighborhoods
CC	GO:0030658	transport vesicle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0030660	Golgi-associated vesicle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0030662	coated vesicle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0030665	clathrin-coated vesicle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0030670	phagocytic vesicle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031098	stress-activated protein kinase signaling cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0031960	response to corticosteroid	IEP	Predict GO terms from Neighborhoods
CC	GO:0032010	phagolysosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0032446	protein modification by small protein conjugation	IEP	Predict GO terms from Neighborhoods
BP	GO:0032780	negative regulation of ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0033539	fatty acid beta-oxidation using acyl-CoA dehydrogenase	IEP	Predict GO terms from Neighborhoods
BP	GO:0033869	nucleoside bisphosphate catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0033907	beta-D-fucosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0033993	response to lipid	IEP	Predict GO terms from Neighborhoods
BP	GO:0034031	ribonucleoside bisphosphate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034034	purine nucleoside bisphosphate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034285	response to disaccharide	IEP	Predict GO terms from Neighborhoods
BP	GO:0035337	fatty-acyl-CoA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035556	intracellular signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0036115	fatty-acyl-CoA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0036289	peptidyl-serine autophosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0038066	p38MAPK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0042306	regulation of protein import into nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0042307	positive regulation of protein import into nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0042539	hypotonic salinity response	IEP	Predict GO terms from Neighborhoods
BP	GO:0042733	embryonic digit morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0042973	glucan endo-1,3-beta-D-glucosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043462	regulation of ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0044273	sulfur compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045472	response to ether	IEP	Predict GO terms from Neighborhoods
BP	GO:0045828	positive regulation of isoprenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046359	butyrate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046459	short-chain fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046824	positive regulation of nucleocytoplasmic transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	IEP	Predict GO terms from Neighborhoods
MF	GO:0047668	amygdalin beta-glucosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048262	determination of dorsal/ventral asymmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0051341	regulation of oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051354	negative regulation of oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051384	response to glucocorticoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0051403	stress-activated MAPK cascade	IEP	Predict GO terms from Neighborhoods
MF	GO:0052890	oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0062150	amorpha-4,11-diene 12-monooxygenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Predict GO terms from Neighborhoods
BP	GO:0071479	cellular response to ionizing radiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0071480	cellular response to gamma radiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0071949	FAD binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0072523	purine-containing compound catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0080079	cellobiose glucosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0080081	4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0080082	esculin beta-glucosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0080083	beta-gentiobiose beta-glucosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080171	lytic vacuole organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0102035	isobutyryl-CoA:FAD oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102934	costunolide synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0120227	acyl-CoA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1900182	positive regulation of protein localization to nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:1900618	regulation of shoot system morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1901371	regulation of leaf morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1901419	regulation of response to alcohol	IEP	Predict GO terms from Neighborhoods
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:1901567	fatty acid derivative binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1901569	fatty acid derivative catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901700	response to oxygen-containing compound	IEP	Predict GO terms from Neighborhoods
BP	GO:1901976	regulation of cell cycle checkpoint	IEP	Predict GO terms from Neighborhoods
BP	GO:1901978	positive regulation of cell cycle checkpoint	IEP	Predict GO terms from Neighborhoods
BP	GO:1902189	2-methylbutanoyl-CoA(4-) metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902190	2-methylbutanoyl-CoA(4-) catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902192	2-methylbut-2-enoyl-CoA(4-) metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902195	isovaleryl-CoA(4-) metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902196	isovaleryl-CoA(4-) catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902198	3-methylbut-2-enoyl-CoA(4-) metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902932	positive regulation of alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903013	response to differentiation-inducing factor 1	IEP	Predict GO terms from Neighborhoods
CC	GO:1903293	phosphatase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1904289	regulation of mitotic DNA damage checkpoint	IEP	Predict GO terms from Neighborhoods
BP	GO:1904291	positive regulation of mitotic DNA damage checkpoint	IEP	Predict GO terms from Neighborhoods
BP	GO:1904892	regulation of receptor signaling pathway via STAT	IEP	Predict GO terms from Neighborhoods
BP	GO:1904894	positive regulation of receptor signaling pathway via STAT	IEP	Predict GO terms from Neighborhoods
BP	GO:1905615	positive regulation of developmental vegetative growth	IEP	Predict GO terms from Neighborhoods
BP	GO:1905957	regulation of cellular response to alcohol	IEP	Predict GO terms from Neighborhoods
BP	GO:2000001	regulation of DNA damage checkpoint	IEP	Predict GO terms from Neighborhoods
BP	GO:2000003	positive regulation of DNA damage checkpoint	IEP	Predict GO terms from Neighborhoods
BP	GO:2000035	regulation of stem cell division	IEP	Predict GO terms from Neighborhoods
BP	GO:2000468	regulation of peroxidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:2000469	negative regulation of peroxidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:2001022	positive regulation of response to DNA damage stimulus	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR036236	Znf_C2H2_sf	29	57

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SOLTUB.AGRIA.G00000029698

Expression Profile

Co-expression Networks

Functional Annotation