SOLTUB.AGRIA.G00000029704

Description : Laccase

Gene families : OG_02_0001155 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000029704
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_147

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009414	response to water deprivation	IEA	AHRD
BP	GO:0009415	response to water	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009698	phenylpropanoid metabolic process	None	Extended
BP	GO:0009699	phenylpropanoid biosynthetic process	None	Extended
BP	GO:0009808	lignin metabolic process	None	Extended
BP	GO:0009809	lignin biosynthetic process	IEA	AHRD
BP	GO:0009832	plant-type cell wall biogenesis	None	Extended
BP	GO:0009834	plant-type secondary cell wall biogenesis	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	None	Extended
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019439	aromatic compound catabolic process	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042546	cell wall biogenesis	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044550	secondary metabolite biosynthetic process	None	Extended
BP	GO:0046271	phenylpropanoid catabolic process	None	Extended
BP	GO:0046274	lignin catabolic process	IEA	AHRD
BP	GO:0046688	response to copper ion	IEA	AHRD
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
CC	GO:0048046	apoplast	IEA	AHRD
CC	GO:0048226	Casparian strip	IEA	AHRD
BP	GO:0048364	root development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0052716	hydroquinone:oxygen oxidoreductase activity	IEA	AHRD
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080022	primary root development	IEA	AHRD
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901361	organic cyclic compound catabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0000030	mannosyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0000323	lytic vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0003012	muscle system process	IEP	Predict GO terms from Neighborhoods
MF	GO:0004103	choline kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predict GO terms from Neighborhoods
MF	GO:0004558	alpha-1,4-glucosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004630	phospholipase D activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005618	cell wall	IEP	Predict GO terms from Neighborhoods
CC	GO:0005764	lysosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005880	nuclear microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0005976	polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0005977	glycogen metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006073	cellular glucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006112	energy reserve metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006656	phosphatidylcholine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006808	regulation of nitrogen utilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0006809	nitric oxide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006936	muscle contraction	IEP	Predict GO terms from Neighborhoods
BP	GO:0006941	striated muscle contraction	IEP	Predict GO terms from Neighborhoods
BP	GO:0006995	cellular response to nitrogen starvation	IEP	Predict GO terms from Neighborhoods
MF	GO:0008131	primary amine oxidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008525	phosphatidylcholine transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0009044	xylan 1,4-beta-xylosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009310	amine catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009505	plant-type cell wall	IEP	Predict GO terms from Neighborhoods
CC	GO:0009531	secondary cell wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0009617	response to bacterium	IEP	Predict GO terms from Neighborhoods
BP	GO:0009733	response to auxin	IEP	Predict GO terms from Neighborhoods
BP	GO:0009735	response to cytokinin	IEP	Predict GO terms from Neighborhoods
BP	GO:0009741	response to brassinosteroid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009813	flavonoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009903	chloroplast avoidance movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0009904	chloroplast accumulation movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0010068	protoderm histogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010089	xylem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010224	response to UV-B	IEP	Predict GO terms from Neighborhoods
CC	GO:0010282	senescence-associated vacuole	IEP	Predict GO terms from Neighborhoods
MF	GO:0010294	abscisic acid glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010358	leaf shaping	IEP	Predict GO terms from Neighborhoods
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010410	hemicellulose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010411	xyloglucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010455	positive regulation of cell fate commitment	IEP	Predict GO terms from Neighborhoods
BP	GO:0010981	regulation of cell wall macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016757	glycosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016758	hexosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019187	beta-1,4-mannosyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0030312	external encapsulating structure	IEP	Predict GO terms from Neighborhoods
BP	GO:0031155	regulation of reproductive fruiting body development	IEP	Predict GO terms from Neighborhoods
MF	GO:0031320	hexitol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032103	positive regulation of response to external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0032106	positive regulation of response to extracellular stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0032109	positive regulation of response to nutrient levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0034638	phosphatidylcholine catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044042	glucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044347	cell wall polysaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045229	external encapsulating structure organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0045491	xylan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045493	xylan catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0045551	cinnamyl-alcohol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045848	positive regulation of nitrogen utilization	IEP	Predict GO terms from Neighborhoods
MF	GO:0046029	mannitol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0046209	nitric oxide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046466	membrane lipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046470	phosphatidylcholine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046475	glycerophospholipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046486	glycerolipid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046527	glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0046686	response to cadmium ion	IEP	Predict GO terms from Neighborhoods
MF	GO:0047259	glucomannan 4-beta-mannosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048759	xylem vessel member cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048829	root cap development	IEP	Predict GO terms from Neighborhoods
BP	GO:0051365	cellular response to potassium ion starvation	IEP	Predict GO terms from Neighborhoods
MF	GO:0051753	mannan synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052597	diamine oxidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052747	sinapyl alcohol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0061634	alpha-D-xyloside xylohydrolase	IEP	Predict GO terms from Neighborhoods
BP	GO:0071323	cellular response to chitin	IEP	Predict GO terms from Neighborhoods
BP	GO:0071555	cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0075260	regulation of spore-bearing organ development	IEP	Predict GO terms from Neighborhoods
MF	GO:0080176	xyloglucan 1,6-alpha-xylosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080187	floral organ senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:0090058	metaxylem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0090059	protoxylem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0090398	cellular senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:0090400	stress-induced premature senescence	IEP	Predict GO terms from Neighborhoods
MF	GO:0090554	phosphatidylcholine floppase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0090599	alpha-glucosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090601	enucleation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090602	sieve element enucleation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090693	plant organ senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:0097184	response to azide	IEP	Predict GO terms from Neighborhoods
BP	GO:0097185	cellular response to azide	IEP	Predict GO terms from Neighborhoods
BP	GO:0097237	cellular response to toxic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0097502	mannosylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0097599	xylanase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0097655	serpin family protein binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0102311	8-hydroxygeraniol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102802	thebaine 6-O-demethylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102805	codeine O-demethylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0120091	jasmonic acid hydrolase	IEP	Predict GO terms from Neighborhoods
MF	GO:0140303	intramembrane lipid transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140326	ATPase-coupled intramembrane lipid transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140327	flippase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140328	floppase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140333	glycerophospholipid flippase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1900150	regulation of defense response to fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:1900992	(-)-secologanin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900994	(-)-secologanin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901348	positive regulation of secondary cell wall biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1901703	protein localization involved in auxin polar transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1901806	beta-glucoside biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902265	abscisic acid homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:1903340	positive regulation of cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1904248	regulation of age-related resistance	IEP	Predict GO terms from Neighborhoods
BP	GO:1904250	positive regulation of age-related resistance	IEP	Predict GO terms from Neighborhoods
BP	GO:1905038	regulation of membrane lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1990169	stress response to copper ion	IEP	Predict GO terms from Neighborhoods
BP	GO:2000895	hemicellulose catabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011706	Cu-oxidase_C	428	551
IPR011707	Cu-oxidase_N	32	146
IPR008972	Cupredoxin	19	175
IPR017761	Laccase	23	568
IPR008972	Cupredoxin	152	345
IPR001117	Cu-oxidase	158	308
IPR008972	Cupredoxin	350	568

External Links

No external refs found!

SOLTUB.AGRIA.G00000029704

Expression Profile

Co-expression Networks

Functional Annotation