SOLTUB.AGRIA.G00000029890

Description : Iron-sulfur cluster assembly protein, putative

Gene families : OG_02_0026520 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000029890
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_699

Type	GO Term	Name	Evidence	Source
BP	GO:0003008	system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005759	mitochondrial matrix	IEA	AHRD
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006766	vitamin metabolic process	None	Extended
BP	GO:0006767	water-soluble vitamin metabolic process	None	Extended
BP	GO:0006768	biotin metabolic process	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006779	porphyrin-containing compound biosynthetic process	None	Extended
BP	GO:0006783	heme biosynthetic process	IEA	AHRD
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009102	biotin biosynthetic process	IEA	AHRD
BP	GO:0009110	vitamin biosynthetic process	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016226	iron-sulfur cluster assembly	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0031163	metallo-sulfur cluster assembly	None	Extended
CC	GO:0031974	membrane-enclosed lumen	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0036455	iron-sulfur transferase activity	IEA	AHRD
BP	GO:0042168	heme metabolic process	None	Extended
BP	GO:0042364	water-soluble vitamin biosynthetic process	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043233	organelle lumen	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044572	[4Fe-4S] cluster assembly	IEA	AHRD
BP	GO:0046148	pigment biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050886	endocrine process	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0051536	iron-sulfur cluster binding	None	Extended
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEA	AHRD
MF	GO:0051540	metal cluster binding	None	Extended
BP	GO:0051604	protein maturation	None	Extended
CC	GO:0070013	intracellular organelle lumen	None	Extended
BP	GO:0071000	response to magnetism	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:0097428	protein maturation by iron-sulfur cluster transfer	None	Extended
BP	GO:0106035	protein maturation by [4Fe-4S] cluster transfer	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000329	fungal-type vacuole membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0000407	phagophore assembly site	IEP	Predict GO terms from Neighborhoods
CC	GO:0000421	autophagosome membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0000422	autophagy of mitochondrion	IEP	Predict GO terms from Neighborhoods
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004722	protein serine/threonine phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004723	calcium-dependent protein serine/threonine phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005509	calcium ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0005513	detection of calcium ion	IEP	Predict GO terms from Neighborhoods
MF	GO:0005543	phospholipid binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005774	vacuolar membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0005840	ribosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005874	microtubule	IEP	Predict GO terms from Neighborhoods
CC	GO:0005955	calcineurin complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006470	protein dephosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006605	protein targeting	IEP	Predict GO terms from Neighborhoods
BP	GO:0006623	protein targeting to vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0006873	cellular ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006875	cellular metal ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006886	intracellular protein transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006914	autophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0006971	hypotonic response	IEP	Predict GO terms from Neighborhoods
BP	GO:0006972	hyperosmotic response	IEP	Predict GO terms from Neighborhoods
BP	GO:0006995	cellular response to nitrogen starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007005	mitochondrion organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007034	vacuolar transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0008233	peptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008234	cysteine-type peptidase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0008289	lipid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008429	phosphatidylethanolamine binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009267	cellular response to starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009268	response to pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0009593	detection of chemical stimulus	IEP	Predict GO terms from Neighborhoods
CC	GO:0009705	plant-type vacuole membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0009738	abscisic acid-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009860	pollen tube growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0009932	cell tip growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0010446	response to alkaline pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0010506	regulation of autophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0010959	regulation of metal ion transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0012506	vesicle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0016236	macroautophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0016237	lysosomal microautophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0016241	regulation of macroautophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0016311	dephosphorylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0016787	hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016791	phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016874	ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Predict GO terms from Neighborhoods
BP	GO:0019722	calcium-mediated signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0019725	cellular homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0019776	Atg8 ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019779	Atg8 activating enzyme activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019786	Atg8-specific peptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0019898	extrinsic component of membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0019900	kinase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0019932	second-messenger-mediated signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0022411	cellular component disassembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0022626	cytosolic ribosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0030003	cellular cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030004	cellular monovalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030007	cellular potassium ion homeostasis	IEP	Predict GO terms from Neighborhoods
CC	GO:0030659	cytoplasmic vesicle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031090	organelle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031329	regulation of cellular catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0031386	protein tag	IEP	Predict GO terms from Neighborhoods
BP	GO:0031669	cellular response to nutrient levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0032258	cytoplasm to vacuole transport by the Cvt pathway	IEP	Predict GO terms from Neighborhoods
CC	GO:0032578	aleurone grain membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0032780	negative regulation of ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0033365	protein localization to organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0034497	protein localization to phagophore assembly site	IEP	Predict GO terms from Neighborhoods
BP	GO:0034727	piecemeal microautophagy of the nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0042538	hyperosmotic salinity response	IEP	Predict GO terms from Neighborhoods
BP	GO:0042539	hypotonic salinity response	IEP	Predict GO terms from Neighborhoods
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042594	response to starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043266	regulation of potassium ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0043269	regulation of ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0043462	regulation of ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043562	cellular response to nitrogen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0044092	negative regulation of molecular function	IEP	Predict GO terms from Neighborhoods
CC	GO:0044232	organelle membrane contact site	IEP	Predict GO terms from Neighborhoods
BP	GO:0044804	autophagy of nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0044805	late nucleophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0048193	Golgi vesicle transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0051592	response to calcium ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0051606	detection of stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0055065	metal ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055067	monovalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055075	potassium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055080	cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055082	cellular chemical homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0061024	membrane organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0061025	membrane fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0061709	reticulophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0061726	mitochondrion disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0061912	selective autophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0061919	process utilizing autophagic mechanism	IEP	Predict GO terms from Neighborhoods
BP	GO:0071211	protein targeting to vacuole involved in autophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0072594	establishment of protein localization to organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0072665	protein localization to vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0072666	establishment of protein localization to vacuole	IEP	Predict GO terms from Neighborhoods
CC	GO:0090406	pollen tube	IEP	Predict GO terms from Neighborhoods
CC	GO:0098588	bounding membrane of organelle	IEP	Predict GO terms from Neighborhoods
CC	GO:0098852	lytic vacuole membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099081	supramolecular polymer	IEP	Predict GO terms from Neighborhoods
CC	GO:0099512	supramolecular fiber	IEP	Predict GO terms from Neighborhoods
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	Predict GO terms from Neighborhoods
CC	GO:0120095	vacuole-isolation membrane contact site	IEP	Predict GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predict GO terms from Neighborhoods
BP	GO:1903008	organelle disassembly	IEP	Predict GO terms from Neighborhoods
CC	GO:1903293	phosphatase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1905153	regulation of membrane invagination	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR016092	FeS_cluster_insertion	26	91
IPR000361	FeS_biogenesis	12	88
IPR035903	HesB-like_dom_sf	22	81

External Links

No external refs found!

SOLTUB.AGRIA.G00000029890

Expression Profile

Co-expression Networks

Functional Annotation