SOLTUB.AGRIA.G00000003073

Description : RNA polymerase sigma factor

Gene families : OG_02_0012156 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000003073
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_27

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	None	Extended
MF	GO:0005488	binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006352	DNA-templated transcription initiation	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0006399	tRNA metabolic process	IEA	AHRD
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009507	chloroplast	IEA	AHRD
CC	GO:0009536	plastid	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009657	plastid organization	None	Extended
BP	GO:0009658	chloroplast organization	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010114	response to red light	IEA	AHRD
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016987	sigma factor activity	IEA	AHRD
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000028	ribosomal small subunit assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0000049	tRNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0000166	nucleotide binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0000427	plastid-encoded plastid RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000959	mitochondrial RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0000963	mitochondrial RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0001910	regulation of leukocyte mediated cytotoxicity	IEP	Predict GO terms from Neighborhoods
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0002474	antigen processing and presentation of peptide antigen via MHC class I	IEP	Predict GO terms from Neighborhoods
BP	GO:0002483	antigen processing and presentation of endogenous peptide antigen	IEP	Predict GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003729	mRNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003747	translation release factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004519	endonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004802	transketolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004813	alanine-tRNA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004816	asparagine-tRNA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004817	cysteine-tRNA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004822	isoleucine-tRNA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004831	tyrosine-tRNA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005384	manganese ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005524	ATP binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0005525	GTP binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005622	intracellular anatomical structure	IEP	Predict GO terms from Neighborhoods
CC	GO:0005739	mitochondrion	IEP	Predict GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006397	mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006412	translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006415	translational termination	IEP	Predict GO terms from Neighborhoods
BP	GO:0006417	regulation of translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006419	alanyl-tRNA aminoacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006421	asparaginyl-tRNA aminoacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006423	cysteinyl-tRNA aminoacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006428	isoleucyl-tRNA aminoacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006431	methionyl-tRNA aminoacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006437	tyrosyl-tRNA aminoacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006450	regulation of translational fidelity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006518	peptide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006520	cellular amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006740	NADPH regeneration	IEP	Predict GO terms from Neighborhoods
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006828	manganese ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0007007	inner mitochondrial membrane organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0008079	translation termination factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008237	metallopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008270	zinc ion binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008887	glycerate kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009051	pentose-phosphate shunt, oxidative branch	IEP	Predict GO terms from Neighborhoods
BP	GO:0009271	phage shock	IEP	Predict GO terms from Neighborhoods
CC	GO:0009295	nucleoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0009368	endopeptidase Clp complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0009451	RNA modification	IEP	Predict GO terms from Neighborhoods
CC	GO:0009508	plastid chromosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0009526	plastid envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0009528	plastid inner membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0009532	plastid stroma	IEP	Predict GO terms from Neighborhoods
CC	GO:0009534	chloroplast thylakoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0009535	chloroplast thylakoid membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0009570	chloroplast stroma	IEP	Predict GO terms from Neighborhoods
CC	GO:0009579	thylakoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009663	plasmodesma organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009668	plastid membrane organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0009706	chloroplast inner membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0009840	chloroplastic endopeptidase Clp complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0009842	cyanelle	IEP	Predict GO terms from Neighborhoods
MF	GO:0009974	zeinoxanthin epsilon hydroxylase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0010007	magnesium chelatase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0010019	chloroplast-nucleus signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010027	thylakoid membrane organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010207	photosystem II assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0010217	cellular aluminum ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010239	chloroplast mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0010270	photosystem II oxygen evolving complex assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0010291	carotene beta-ring hydroxylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010305	leaf vascular tissue pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010343	singlet oxygen-mediated programmed cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0010467	gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0010588	cotyledon vascular tissue pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	Predict GO terms from Neighborhoods
MF	GO:0015083	aluminum ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015440	ABC-type peptide transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015693	magnesium ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015979	photosynthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0015994	chlorophyll metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0015995	chlorophyll biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016071	mRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016122	xanthophyll metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016123	xanthophyll biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016149	translation release factor activity, codon specific	IEP	Predict GO terms from Neighborhoods
MF	GO:0016744	transketolase or transaldolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016851	magnesium chelatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016874	ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0017076	purine nucleotide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0018026	peptidyl-lysine monomethylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0019001	guanyl nucleotide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0019253	reductive pentose-phosphate cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0019369	arachidonic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019685	photosynthesis, dark reaction	IEP	Predict GO terms from Neighborhoods
BP	GO:0019752	carboxylic acid metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0019866	organelle inner membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0019883	antigen processing and presentation of endogenous antigen	IEP	Predict GO terms from Neighborhoods
BP	GO:0019885	antigen processing and presentation of endogenous peptide antigen via MHC class I	IEP	Predict GO terms from Neighborhoods
BP	GO:0022411	cellular component disassembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0030554	adenyl nucleotide binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031234	extrinsic component of cytoplasmic side of plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031330	negative regulation of cellular catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031341	regulation of cell killing	IEP	Predict GO terms from Neighborhoods
BP	GO:0031425	chloroplast RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0031426	polycistronic mRNA processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0031969	chloroplast membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031976	plastid thylakoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0032468	Golgi calcium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0032472	Golgi calcium ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0032543	mitochondrial translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0032544	plastid translation	IEP	Predict GO terms from Neighborhoods
MF	GO:0032553	ribonucleotide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0032555	purine ribonucleotide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032790	ribosome disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034250	positive regulation of cellular amide metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0034357	photosynthetic membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0034414	tRNA 3'-trailer cleavage, endonucleolytic	IEP	Predict GO terms from Neighborhoods
BP	GO:0034514	mitochondrial unfolded protein response	IEP	Predict GO terms from Neighborhoods
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0034702	ion channel complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0034703	cation channel complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0034705	potassium channel complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0036094	small molecule binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0042170	plastid membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0042287	MHC protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0042407	cristae formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042440	pigment metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0042644	chloroplast nucleoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0042646	plastid nucleoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0042651	thylakoid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0042779	tRNA 3'-trailer cleavage	IEP	Predict GO terms from Neighborhoods
MF	GO:0042781	3'-tRNA processing endoribonuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042793	plastid transcription	IEP	Predict GO terms from Neighborhoods
CC	GO:0042824	MHC class I peptide loading complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043024	ribosomal small subunit binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043038	amino acid activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043039	tRNA aminoacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043043	peptide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043157	response to cation stress	IEP	Predict GO terms from Neighborhoods
MF	GO:0043167	ion binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043168	anion binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043169	cation binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043335	protein unfolding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043487	regulation of RNA stability	IEP	Predict GO terms from Neighborhoods
BP	GO:0043489	RNA stabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0043603	cellular amide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043604	amide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043933	protein-containing complex organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0045648	positive regulation of erythrocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045727	positive regulation of translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046148	pigment biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046872	metal ion binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0046914	transition metal ion binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0046977	TAP binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0046984	regulation of hemoglobin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046985	positive regulation of hemoglobin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048002	antigen processing and presentation of peptide antigen	IEP	Predict GO terms from Neighborhoods
BP	GO:0048481	plant ovule development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048564	photosystem I assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0048821	erythrocyte development	IEP	Predict GO terms from Neighborhoods
MF	GO:0051002	ligase activity, forming nitrogen-metal bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0051003	ligase activity, forming nitrogen-metal bonds, forming coordination complexes	IEP	Predict GO terms from Neighborhoods
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0055035	plastid thylakoid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0055079	aluminum ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060359	response to ammonium ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0061024	membrane organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0061515	myeloid cell development	IEP	Predict GO terms from Neighborhoods
CC	GO:0062157	mitochondrial ATP-gated potassium channel complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0065003	protein-containing complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0071421	manganese ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0072374	carotene epsilon hydroxylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080156	mitochondrial mRNA modification	IEP	Predict GO terms from Neighborhoods
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0097159	organic cyclic compound binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0097367	carbohydrate derivative binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0098586	cellular response to virus	IEP	Predict GO terms from Neighborhoods
BP	GO:0106074	aminoacyl-tRNA metabolism involved in translational fidelity	IEP	Predict GO terms from Neighborhoods
BP	GO:0140053	mitochondrial gene expression	IEP	Predict GO terms from Neighborhoods
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Predict GO terms from Neighborhoods
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Predict GO terms from Neighborhoods
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	Predict GO terms from Neighborhoods
BP	GO:1900865	chloroplast RNA modification	IEP	Predict GO terms from Neighborhoods
MF	GO:1901265	nucleoside phosphate binding	IEP	Predict GO terms from Neighborhoods
MF	GO:1901363	heterocyclic compound binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1902369	negative regulation of RNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902602	aluminum ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1903008	organelle disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1903830	magnesium ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1904821	chloroplast disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1905267	endonucleolytic cleavage involved in tRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR007627	RNA_pol_sigma70_r2	448	491
IPR014284	RNA_pol_sigma-70_dom	448	644
IPR013325	RNA_pol_sigma_r2	300	407
IPR013324	RNA_pol_sigma_r3/r4-like	554	653
IPR013324	RNA_pol_sigma_r3/r4-like	495	568
IPR007624	RNA_pol_sigma70_r3	501	576
IPR007630	RNA_pol_sigma70_r4	590	642
IPR013325	RNA_pol_sigma_r2	448	489

External Links

No external refs found!

SOLTUB.AGRIA.G00000003073

Expression Profile

Co-expression Networks

Functional Annotation