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  5. SOLTUB.AGRIA.G00000030142

SOLTUB.AGRIA.G00000030142


Description : 50S ribosomal protein L5


Gene families : OG_02_0010366 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000030142
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_227


Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA AHRD
MF GO:0003729 mRNA binding IEA AHRD
MF GO:0003735 structural constituent of ribosome IEA AHRD
BP GO:0006412 translation IEA AHRD
CC GO:0009570 chloroplast stroma IEA AHRD
CC GO:0009941 chloroplast envelope IEA AHRD
MF GO:0019843 rRNA binding IEA AHRD
CC GO:0022625 cytosolic large ribosomal subunit IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0002347 response to tumor cell IEP Predict GO terms from Neighborhoods
BP GO:0002357 defense response to tumor cell IEP Predict GO terms from Neighborhoods
BP GO:0002532 production of molecular mediator involved in inflammatory response IEP Predict GO terms from Neighborhoods
BP GO:0002536 respiratory burst involved in inflammatory response IEP Predict GO terms from Neighborhoods
BP GO:0002679 respiratory burst involved in defense response IEP Predict GO terms from Neighborhoods
BP GO:0002694 regulation of leukocyte activation IEP Predict GO terms from Neighborhoods
BP GO:0002695 negative regulation of leukocyte activation IEP Predict GO terms from Neighborhoods
MF GO:0003727 single-stranded RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0004427 inorganic diphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0004866 endopeptidase inhibitor activity IEP Predict GO terms from Neighborhoods
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predict GO terms from Neighborhoods
CC GO:0005759 mitochondrial matrix IEP Predict GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Predict GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006415 translational termination IEP Predict GO terms from Neighborhoods
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006801 superoxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007162 negative regulation of cell adhesion IEP Predict GO terms from Neighborhoods
MF GO:0008187 poly-pyrimidine tract binding IEP Predict GO terms from Neighborhoods
MF GO:0008266 poly(U) RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0008379 thioredoxin peroxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008430 selenium binding IEP Predict GO terms from Neighborhoods
MF GO:0008785 alkyl hydroperoxide reductase activity IEP Predict GO terms from Neighborhoods
CC GO:0009503 thylakoid light-harvesting complex IEP Predict GO terms from Neighborhoods
CC GO:0009521 photosystem IEP Predict GO terms from Neighborhoods
CC GO:0009523 photosystem II IEP Predict GO terms from Neighborhoods
CC GO:0009842 cyanelle IEP Predict GO terms from Neighborhoods
CC GO:0010007 magnesium chelatase complex IEP Predict GO terms from Neighborhoods
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0010319 stromule IEP Predict GO terms from Neighborhoods
BP GO:0010380 regulation of chlorophyll biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0015979 photosynthesis IEP Predict GO terms from Neighborhoods
BP GO:0015994 chlorophyll metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0015995 chlorophyll biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016168 chlorophyll binding IEP Predict GO terms from Neighborhoods
CC GO:0016589 NURF complex IEP Predict GO terms from Neighborhoods
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016851 magnesium chelatase activity IEP Predict GO terms from Neighborhoods
BP GO:0018158 protein oxidation IEP Predict GO terms from Neighborhoods
BP GO:0018171 peptidyl-cysteine oxidation IEP Predict GO terms from Neighborhoods
BP GO:0018198 peptidyl-cysteine modification IEP Predict GO terms from Neighborhoods
BP GO:0018298 obsolete protein-chromophore linkage IEP Predict GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019430 removal of superoxide radicals IEP Predict GO terms from Neighborhoods
BP GO:0022407 regulation of cell-cell adhesion IEP Predict GO terms from Neighborhoods
BP GO:0022408 negative regulation of cell-cell adhesion IEP Predict GO terms from Neighborhoods
CC GO:0030076 light-harvesting complex IEP Predict GO terms from Neighborhoods
BP GO:0030099 myeloid cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030193 regulation of blood coagulation IEP Predict GO terms from Neighborhoods
BP GO:0030194 positive regulation of blood coagulation IEP Predict GO terms from Neighborhoods
MF GO:0030414 peptidase inhibitor activity IEP Predict GO terms from Neighborhoods
BP GO:0030518 intracellular steroid hormone receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0030522 intracellular receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0030656 regulation of vitamin metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0031010 ISWI-type complex IEP Predict GO terms from Neighborhoods
BP GO:0031664 regulation of lipopolysaccharide-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0031665 negative regulation of lipopolysaccharide-mediated signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Predict GO terms from Neighborhoods
BP GO:0032088 negative regulation of NF-kappaB transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0032239 regulation of nucleobase-containing compound transport IEP Predict GO terms from Neighborhoods
BP GO:0032241 positive regulation of nucleobase-containing compound transport IEP Predict GO terms from Neighborhoods
BP GO:0032388 positive regulation of intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0032544 plastid translation IEP Predict GO terms from Neighborhoods
BP GO:0032943 mononuclear cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0033673 negative regulation of kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0033728 divinyl chlorophyllide a 8-vinyl-reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0035076 ecdysone receptor-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0035206 regulation of hemocyte proliferation IEP Predict GO terms from Neighborhoods
BP GO:0042098 T cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0042110 T cell activation IEP Predict GO terms from Neighborhoods
BP GO:0042127 regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
BP GO:0042391 regulation of membrane potential IEP Predict GO terms from Neighborhoods
BP GO:0042440 pigment metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042742 defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:0042744 hydrogen peroxide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042766 obsolete nucleosome mobilization IEP Predict GO terms from Neighborhoods
MF GO:0043023 ribosomal large subunit binding IEP Predict GO terms from Neighborhoods
MF GO:0043027 cysteine-type endopeptidase inhibitor activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
MF GO:0043028 cysteine-type endopeptidase regulator activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Predict GO terms from Neighborhoods
BP GO:0043433 negative regulation of DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0043489 RNA stabilization IEP Predict GO terms from Neighborhoods
MF GO:0043495 protein-membrane adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:0043523 regulation of neuron apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043524 negative regulation of neuron apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0045454 cell redox homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0045580 regulation of T cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045581 negative regulation of T cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045619 regulation of lymphocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045620 negative regulation of lymphocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045730 respiratory burst IEP Predict GO terms from Neighborhoods
BP GO:0045828 positive regulation of isoprenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046136 positive regulation of vitamin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046148 pigment biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046649 lymphocyte activation IEP Predict GO terms from Neighborhoods
BP GO:0046651 lymphocyte proliferation IEP Predict GO terms from Neighborhoods
BP GO:0046822 regulation of nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0046824 positive regulation of nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0046831 regulation of RNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0046833 positive regulation of RNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0048538 thymus development IEP Predict GO terms from Neighborhoods
BP GO:0048872 homeostasis of number of cells IEP Predict GO terms from Neighborhoods
BP GO:0050818 regulation of coagulation IEP Predict GO terms from Neighborhoods
BP GO:0050820 positive regulation of coagulation IEP Predict GO terms from Neighborhoods
BP GO:0050863 regulation of T cell activation IEP Predict GO terms from Neighborhoods
BP GO:0050865 regulation of cell activation IEP Predict GO terms from Neighborhoods
BP GO:0050866 negative regulation of cell activation IEP Predict GO terms from Neighborhoods
BP GO:0050868 negative regulation of T cell activation IEP Predict GO terms from Neighborhoods
BP GO:0050878 regulation of body fluid levels IEP Predict GO terms from Neighborhoods
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predict GO terms from Neighborhoods
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predict GO terms from Neighborhoods
BP GO:0051091 positive regulation of DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0051092 positive regulation of NF-kappaB transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051249 regulation of lymphocyte activation IEP Predict GO terms from Neighborhoods
BP GO:0051250 negative regulation of lymphocyte activation IEP Predict GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051348 negative regulation of transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0051744 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0051881 regulation of mitochondrial membrane potential IEP Predict GO terms from Neighborhoods
MF GO:0051920 peroxiredoxin activity IEP Predict GO terms from Neighborhoods
BP GO:0061041 regulation of wound healing IEP Predict GO terms from Neighborhoods
MF GO:0061135 endopeptidase regulator activity IEP Predict GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Predict GO terms from Neighborhoods
MF GO:0070181 small ribosomal subunit rRNA binding IEP Predict GO terms from Neighborhoods
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predict GO terms from Neighborhoods
BP GO:0070661 leukocyte proliferation IEP Predict GO terms from Neighborhoods
BP GO:0071344 diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0089701 U2AF complex IEP Predict GO terms from Neighborhoods
BP GO:0090303 positive regulation of wound healing IEP Predict GO terms from Neighborhoods
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP Predict GO terms from Neighborhoods
MF GO:0140824 thioredoxin-dependent peroxiredoxin activity IEP Predict GO terms from Neighborhoods
BP GO:1900046 regulation of hemostasis IEP Predict GO terms from Neighborhoods
BP GO:1900048 positive regulation of hemostasis IEP Predict GO terms from Neighborhoods
BP GO:1901099 negative regulation of signal transduction in absence of ligand IEP Predict GO terms from Neighborhoods
BP GO:1901215 negative regulation of neuron death IEP Predict GO terms from Neighborhoods
BP GO:1901259 chloroplast rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:1901403 positive regulation of tetrapyrrole metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901463 regulation of tetrapyrrole biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901465 positive regulation of tetrapyrrole biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902105 regulation of leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:1902106 negative regulation of leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:1902326 positive regulation of chlorophyll biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902369 negative regulation of RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902930 regulation of alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902932 positive regulation of alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903034 regulation of response to wounding IEP Predict GO terms from Neighborhoods
BP GO:1903036 positive regulation of response to wounding IEP Predict GO terms from Neighborhoods
BP GO:1903037 regulation of leukocyte cell-cell adhesion IEP Predict GO terms from Neighborhoods
BP GO:1903038 negative regulation of leukocyte cell-cell adhesion IEP Predict GO terms from Neighborhoods
BP GO:1903706 regulation of hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:1903707 negative regulation of hemopoiesis IEP Predict GO terms from Neighborhoods
CC GO:1904949 ATPase complex IEP Predict GO terms from Neighborhoods
BP GO:1904963 regulation of phytol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1904964 positive regulation of phytol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1904965 regulation of vitamin E biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1904966 positive regulation of vitamin E biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2001234 negative regulation of apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001236 regulation of extrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001237 negative regulation of extrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001239 regulation of extrinsic apoptotic signaling pathway in absence of ligand IEP Predict GO terms from Neighborhoods
BP GO:2001240 negative regulation of extrinsic apoptotic signaling pathway in absence of ligand IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR031309 Ribosomal_L5_C 141 234
IPR022803 Ribosomal_L5_dom_sf 60 235
IPR031310 Ribosomal_L5_N 81 137
No external refs found!