SOLTUB.AGRIA.G00000030187

Description : ubiquitin-specific protease 13

Gene families : OG_02_0016062 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000030187
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_20

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010074	maintenance of meristem identity	None	Extended
BP	GO:0010078	maintenance of root meristem identity	IEA	AHRD
BP	GO:0016579	protein deubiquitination	IEA	AHRD
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0019827	stem cell population maintenance	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0098727	maintenance of cell number	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000002	mitochondrial genome maintenance	IEP	Predict GO terms from Neighborhoods
MF	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	IEP	Predict GO terms from Neighborhoods
BP	GO:0001501	skeletal system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0001503	ossification	IEP	Predict GO terms from Neighborhoods
BP	GO:0007517	muscle organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0008016	regulation of heart contraction	IEP	Predict GO terms from Neighborhoods
MF	GO:0008301	DNA binding, bending	IEP	Predict GO terms from Neighborhoods
MF	GO:0008327	methyl-CpG binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0009952	anterior/posterior pattern specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0010611	regulation of cardiac muscle hypertrophy	IEP	Predict GO terms from Neighborhoods
BP	GO:0010613	positive regulation of cardiac muscle hypertrophy	IEP	Predict GO terms from Neighborhoods
BP	GO:0010827	regulation of glucose transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010828	positive regulation of glucose transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0014742	positive regulation of muscle hypertrophy	IEP	Predict GO terms from Neighborhoods
BP	GO:0014743	regulation of muscle hypertrophy	IEP	Predict GO terms from Neighborhoods
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0022407	regulation of cell-cell adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0030239	myofibril assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0031032	actomyosin structure organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031156	regulation of sorocarp development	IEP	Predict GO terms from Neighborhoods
BP	GO:0031285	regulation of sorocarp stalk cell differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0035035	histone acetyltransferase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0035637	multicellular organismal signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0036003	positive regulation of transcription from RNA polymerase II promoter in response to stress	IEP	Predict GO terms from Neighborhoods
MF	GO:0042826	histone deacetylase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043502	regulation of muscle adaptation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043618	regulation of transcription from RNA polymerase II promoter in response to stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0043620	regulation of DNA-templated transcription in response to stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0044347	cell wall polysaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045730	respiratory burst	IEP	Predict GO terms from Neighborhoods
BP	GO:0046324	regulation of glucose import	IEP	Predict GO terms from Neighborhoods
BP	GO:0046326	positive regulation of glucose import	IEP	Predict GO terms from Neighborhoods
MF	GO:0046332	SMAD binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0048311	mitochondrion distribution	IEP	Predict GO terms from Neighborhoods
BP	GO:0048578	positive regulation of long-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
MF	GO:0051019	mitogen-activated protein kinase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051646	mitochondrion localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0055003	cardiac myofibril assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0055005	ventricular cardiac myofibril assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0060256	regulation of flocculation	IEP	Predict GO terms from Neighborhoods
BP	GO:0061061	muscle structure development	IEP	Predict GO terms from Neighborhoods
BP	GO:0061337	cardiac conduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0070375	ERK5 cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0071277	cellular response to calcium ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0090257	regulation of muscle system process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901261	regulation of sorocarp spore cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:1903450	regulation of G1 to G0 transition	IEP	Predict GO terms from Neighborhoods
BP	GO:1903522	regulation of blood circulation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR024729	USP7_ICP0-binding_dom	211	273

External Links

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SOLTUB.AGRIA.G00000030187

Expression Profile

Co-expression Networks

Functional Annotation