SOLTUB.AGRIA.G00000030423


Description : Transcription factor bhlh140


Gene families : OG_02_0004075 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000030423
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_246


Type GO Term Name Evidence Source
BP GO:0000012 single strand break repair IEA AHRD
CC GO:0000785 chromatin IEA AHRD
MF GO:0003682 chromatin binding IEA AHRD
MF GO:0003697 single-stranded DNA binding IEA AHRD
MF GO:0003725 double-stranded RNA binding IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005730 nucleolus IEA AHRD
BP GO:0006266 DNA ligation IEA AHRD
BP GO:0006302 double-strand break repair IEA AHRD
BP GO:0006790 sulfur compound metabolic process IEA AHRD
MF GO:0008967 phosphoglycolate phosphatase activity IEA AHRD
BP GO:0009150 purine ribonucleotide metabolic process IEA AHRD
MF GO:0030983 mismatched DNA binding IEA AHRD
BP GO:0031647 regulation of protein stability IEA AHRD
MF GO:0032555 purine ribonucleotide binding IEA AHRD
MF GO:0033699 DNA 5'-adenosine monophosphate hydrolase activity IEA AHRD
BP GO:0042542 response to hydrogen peroxide IEA AHRD
MF GO:0043168 anion binding IEA AHRD
MF GO:0046403 polynucleotide 3'-phosphatase activity IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
MF GO:0047485 protein N-terminus binding IEA AHRD
MF GO:0047627 adenylylsulfatase activity IEA AHRD
MF GO:0051219 phosphoprotein binding IEA AHRD
MF GO:1990165 single-strand break-containing DNA binding IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000027 ribosomal large subunit assembly IEP Predict GO terms from Neighborhoods
MF GO:0000049 tRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0000052 citrulline metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000162 tryptophan biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0000175 3'-5'-exoribonuclease activity IEP Predict GO terms from Neighborhoods
CC GO:0000347 THO complex IEP Predict GO terms from Neighborhoods
CC GO:0000445 THO complex part of transcription export complex IEP Predict GO terms from Neighborhoods
BP GO:0000578 embryonic axis specification IEP Predict GO terms from Neighborhoods
CC GO:0000793 condensed chromosome IEP Predict GO terms from Neighborhoods
CC GO:0000922 spindle pole IEP Predict GO terms from Neighborhoods
BP GO:0001510 RNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0001756 somitogenesis IEP Predict GO terms from Neighborhoods
BP GO:0001822 kidney development IEP Predict GO terms from Neighborhoods
BP GO:0001826 inner cell mass cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0001990 regulation of systemic arterial blood pressure by hormone IEP Predict GO terms from Neighborhoods
BP GO:0002097 tRNA wobble base modification IEP Predict GO terms from Neighborhoods
BP GO:0002098 tRNA wobble uridine modification IEP Predict GO terms from Neighborhoods
BP GO:0002926 tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation IEP Predict GO terms from Neighborhoods
BP GO:0003044 regulation of systemic arterial blood pressure mediated by a chemical signal IEP Predict GO terms from Neighborhoods
BP GO:0003073 regulation of systemic arterial blood pressure IEP Predict GO terms from Neighborhoods
BP GO:0003081 regulation of systemic arterial blood pressure by renin-angiotensin IEP Predict GO terms from Neighborhoods
MF GO:0004177 aminopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004349 glutamate 5-kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004350 glutamate-5-semialdehyde dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0004470 malic enzyme activity IEP Predict GO terms from Neighborhoods
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predict GO terms from Neighborhoods
MF GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity IEP Predict GO terms from Neighborhoods
MF GO:0004532 exoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Predict GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Predict GO terms from Neighborhoods
CC GO:0005829 cytosol IEP Predict GO terms from Neighborhoods
CC GO:0005903 brush border IEP Predict GO terms from Neighborhoods
BP GO:0006108 malate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006140 regulation of nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006405 RNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006406 mRNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006520 cellular amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006536 glutamate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006560 proline metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006561 proline biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006568 tryptophan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006586 indolalkylamine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006591 ornithine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006592 ornithine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0007219 Notch signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0008217 regulation of blood pressure IEP Predict GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008235 metalloexopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008237 metallopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008238 exopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Predict GO terms from Neighborhoods
MF GO:0008408 3'-5' exonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0008595 anterior/posterior axis specification, embryo IEP Predict GO terms from Neighborhoods
BP GO:0008652 cellular amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009225 nucleotide-sugar metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009309 amine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009451 RNA modification IEP Predict GO terms from Neighborhoods
BP GO:0009798 axis specification IEP Predict GO terms from Neighborhoods
BP GO:0009948 anterior/posterior axis specification IEP Predict GO terms from Neighborhoods
BP GO:0009952 anterior/posterior pattern specification IEP Predict GO terms from Neighborhoods
MF GO:0010013 N-1-naphthylphthalamic acid binding IEP Predict GO terms from Neighborhoods
BP GO:0010165 response to X-ray IEP Predict GO terms from Neighborhoods
BP GO:0010332 response to gamma radiation IEP Predict GO terms from Neighborhoods
BP GO:0010586 miRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010587 miRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010951 negative regulation of endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Predict GO terms from Neighborhoods
MF GO:0016615 malate dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0017084 delta1-pyrroline-5-carboxylate synthetase activity IEP Predict GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0019202 amino acid kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019240 citrulline biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0030145 manganese ion binding IEP Predict GO terms from Neighborhoods
BP GO:0030177 positive regulation of Wnt signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0030488 tRNA methylation IEP Predict GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0030588 pseudocleavage IEP Predict GO terms from Neighborhoods
BP GO:0030590 first cell cycle pseudocleavage IEP Predict GO terms from Neighborhoods
BP GO:0031123 RNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031426 polycistronic mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0031538 negative regulation of anthocyanin metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Predict GO terms from Neighborhoods
BP GO:0032392 DNA geometric change IEP Predict GO terms from Neighborhoods
BP GO:0032501 multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0032508 DNA duplex unwinding IEP Predict GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0032784 regulation of DNA-templated transcription elongation IEP Predict GO terms from Neighborhoods
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP Predict GO terms from Neighborhoods
MF GO:0033293 monocarboxylic acid binding IEP Predict GO terms from Neighborhoods
CC GO:0033588 elongator holoenzyme complex IEP Predict GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0034661 ncRNA catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0035198 miRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0035265 organ growth IEP Predict GO terms from Neighborhoods
BP GO:0035282 segmentation IEP Predict GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predict GO terms from Neighborhoods
MF GO:0042162 telomeric DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0042273 ribosomal large subunit biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0042350 GDP-L-fucose biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042352 GDP-L-fucose salvage IEP Predict GO terms from Neighborhoods
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043094 cellular metabolic compound salvage IEP Predict GO terms from Neighborhoods
BP GO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043171 peptide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043173 nucleotide salvage IEP Predict GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Predict GO terms from Neighborhoods
BP GO:0043281 regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
CC GO:0043564 Ku70:Ku80 complex IEP Predict GO terms from Neighborhoods
BP GO:0043628 small regulatory ncRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0043648 dicarboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0044748 3'-5'-exoribonuclease activity involved in mature miRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0044771 meiotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
CC GO:0045177 apical part of cell IEP Predict GO terms from Neighborhoods
BP GO:0046219 indolalkylamine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046368 GDP-L-fucose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046662 regulation of oviposition IEP Predict GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Predict GO terms from Neighborhoods
MF GO:0047341 fucose-1-phosphate guanylyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0048522 positive regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0048530 fruit morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048705 skeletal system morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048872 homeostasis of number of cells IEP Predict GO terms from Neighborhoods
MF GO:0050201 fucokinase activity IEP Predict GO terms from Neighborhoods
BP GO:0050795 regulation of behavior IEP Predict GO terms from Neighborhoods
BP GO:0050886 endocrine process IEP Predict GO terms from Neighborhoods
MF GO:0050897 cobalt ion binding IEP Predict GO terms from Neighborhoods
BP GO:0051642 centrosome localization IEP Predict GO terms from Neighborhoods
BP GO:0051651 maintenance of location in cell IEP Predict GO terms from Neighborhoods
BP GO:0051657 maintenance of organelle location IEP Predict GO terms from Neighborhoods
BP GO:0051661 maintenance of centrosome location IEP Predict GO terms from Neighborhoods
BP GO:0055129 L-proline biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0061484 hematopoietic stem cell homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0061842 microtubule organizing center localization IEP Predict GO terms from Neighborhoods
MF GO:0061980 regulatory RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0070006 metalloaminopeptidase activity IEP Predict GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Predict GO terms from Neighborhoods
MF GO:0070401 NADP+ binding IEP Predict GO terms from Neighborhoods
MF GO:0070568 guanylyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0071479 cellular response to ionizing radiation IEP Predict GO terms from Neighborhoods
BP GO:0071480 cellular response to gamma radiation IEP Predict GO terms from Neighborhoods
BP GO:0071481 cellular response to X-ray IEP Predict GO terms from Neighborhoods
BP GO:0080178 5-carbamoylmethyl uridine residue modification IEP Predict GO terms from Neighborhoods
BP GO:0090263 positive regulation of canonical Wnt signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic IEP Predict GO terms from Neighborhoods
CC GO:0097431 mitotic spindle pole IEP Predict GO terms from Neighborhoods
CC GO:0098862 cluster of actin-based cell projections IEP Predict GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0140547 acquisition of seed longevity IEP Predict GO terms from Neighborhoods
BP GO:1900193 regulation of oocyte maturation IEP Predict GO terms from Neighborhoods
BP GO:1900195 positive regulation of oocyte maturation IEP Predict GO terms from Neighborhoods
BP GO:1901605 alpha-amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902031 regulation of NADP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903429 regulation of cell maturation IEP Predict GO terms from Neighborhoods
BP GO:1903431 positive regulation of cell maturation IEP Predict GO terms from Neighborhoods
BP GO:1903538 regulation of meiotic cell cycle process involved in oocyte maturation IEP Predict GO terms from Neighborhoods
BP GO:1990947 exit from meiosis IEP Predict GO terms from Neighborhoods
BP GO:2000024 regulation of leaf development IEP Predict GO terms from Neighborhoods
BP GO:2000116 regulation of cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:2000117 negative regulation of cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:2001234 negative regulation of apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001267 regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001268 negative regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR032566 Znf-C2HE 650 700
IPR036265 HIT-like_sf 525 688
IPR027417 P-loop_NTPase 20 172
IPR002589 Macro_dom 354 427
IPR043472 Macro_dom-like 313 451
No external refs found!