SOLTUB.AGRIA.G00000030470

Description : Protein trichome birefringence

Gene families : OG_02_0020765 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000030470
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_146

Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEA	AHRD
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005768	endosome	IEA	AHRD
CC	GO:0005802	trans-Golgi network	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007623	circadian rhythm	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008374	O-acyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009827	plant-type cell wall modification	IEA	AHRD
BP	GO:0009832	plant-type cell wall biogenesis	None	Extended
BP	GO:0009834	plant-type secondary cell wall biogenesis	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010393	galacturonan metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	IEA	AHRD
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016407	acetyltransferase activity	None	Extended
MF	GO:0016413	O-acetyltransferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	AHRD
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
BP	GO:0042546	cell wall biogenesis	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044038	cell wall macromolecule biosynthetic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0045488	pectin metabolic process	None	Extended
BP	GO:0045489	pectin biosynthetic process	IEA	AHRD
BP	GO:0045491	xylan metabolic process	None	Extended
BP	GO:0045492	xylan biosynthetic process	IEA	AHRD
BP	GO:0045893	positive regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048511	rhythmic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050826	response to freezing	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070589	cellular component macromolecule biosynthetic process	None	Extended
BP	GO:0070592	cell wall polysaccharide biosynthetic process	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
MF	GO:1990538	xylan O-acetyltransferase activity	IEA	AHRD
BP	GO:1990937	xylan acetylation	IEA	AHRD
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0001578	microtubule bundle formation	IEP	Predict GO terms from Neighborhoods
MF	GO:0001664	G protein-coupled receptor binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005109	frizzled binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005635	nuclear envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0005874	microtubule	IEP	Predict GO terms from Neighborhoods
CC	GO:0005881	cytoplasmic microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006665	sphingolipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006672	ceramide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006673	inositol phosphoceramide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007411	axon guidance	IEP	Predict GO terms from Neighborhoods
BP	GO:0008045	motor neuron axon guidance	IEP	Predict GO terms from Neighborhoods
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008432	JUN kinase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0009101	glycoprotein biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009574	preprophase band	IEP	Predict GO terms from Neighborhoods
BP	GO:0009620	response to fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009723	response to ethylene	IEP	Predict GO terms from Neighborhoods
BP	GO:0009737	response to abscisic acid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009800	cinnamic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009808	lignin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009825	multidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009902	chloroplast relocation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010031	circumnutation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010087	phloem or xylem histogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010089	xylem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010091	trichome branching	IEP	Predict GO terms from Neighborhoods
BP	GO:0010259	multicellular organism aging	IEP	Predict GO terms from Neighborhoods
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010337	regulation of salicylic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010413	glucuronoxylan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010417	glucuronoxylan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010555	response to mannitol	IEP	Predict GO terms from Neighborhoods
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0015020	glucuronosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016049	cell growth	IEP	Predict GO terms from Neighborhoods
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
BP	GO:0017015	regulation of transforming growth factor beta receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0019632	shikimate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019750	chloroplast localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0030148	sphingolipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030510	regulation of BMP signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0030511	positive regulation of transforming growth factor beta receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0030513	positive regulation of BMP signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0030579	ubiquitin-dependent SMAD protein catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0030775	glucuronoxylan 4-O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0031902	late endosome membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0032183	SUMO binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0032184	SUMO polymer binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032801	receptor catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032950	regulation of beta-glucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032951	regulation of beta-glucan biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0033293	monocarboxylic acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0035017	cuticle pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035107	appendage morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035108	limb morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035136	forelimb morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0038018	Wnt receptor catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0042285	xylosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043112	receptor metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044380	protein localization to cytoskeleton	IEP	Predict GO terms from Neighborhoods
BP	GO:0046271	phenylpropanoid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046274	lignin catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046332	SMAD binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0046513	ceramide biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0048032	galacturonate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0050879	multicellular organismal movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0051211	anisotropic cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0051511	negative regulation of unidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0051644	plastid localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051665	membrane raft localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051667	establishment of plastid localization	IEP	Predict GO terms from Neighborhoods
MF	GO:0052716	hydroquinone:oxygen oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0055028	cortical microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0060384	innervation	IEP	Predict GO terms from Neighborhoods
BP	GO:0061061	muscle structure development	IEP	Predict GO terms from Neighborhoods
MF	GO:0070001	aspartic-type peptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070304	positive regulation of stress-activated protein kinase signaling cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0070911	global genome nucleotide-excision repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0071369	cellular response to ethylene stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0072089	stem cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0072697	protein localization to cell cortex	IEP	Predict GO terms from Neighborhoods
BP	GO:0072698	protein localization to microtubule cytoskeleton	IEP	Predict GO terms from Neighborhoods
BP	GO:0072699	protein localization to cortical microtubule cytoskeleton	IEP	Predict GO terms from Neighborhoods
BP	GO:0080086	stamen filament development	IEP	Predict GO terms from Neighborhoods
BP	GO:0080091	regulation of raffinose metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0080116	glucuronoxylan glucuronosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080187	floral organ senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:0090092	regulation of transmembrane receptor protein serine/threonine kinase signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0090100	positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0090175	regulation of establishment of planar polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090287	regulation of cellular response to growth factor stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0090436	leaf pavement cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0097485	neuron projection guidance	IEP	Predict GO terms from Neighborhoods
CC	GO:0099081	supramolecular polymer	IEP	Predict GO terms from Neighborhoods
CC	GO:0099512	supramolecular fiber	IEP	Predict GO terms from Neighborhoods
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	Predict GO terms from Neighborhoods
BP	GO:1900384	regulation of flavonol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900386	positive regulation of flavonol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901348	positive regulation of secondary cell wall biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1901957	regulation of cutin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903338	regulation of cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1903340	positive regulation of cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1903844	regulation of cellular response to transforming growth factor beta stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:1903846	positive regulation of cellular response to transforming growth factor beta stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:1990482	sphingolipid alpha-glucuronosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:2000027	regulation of animal organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:2000050	regulation of non-canonical Wnt signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:2000095	regulation of Wnt signaling pathway, planar cell polarity pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:2000652	regulation of secondary cell wall biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:2001006	regulation of cellulose biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR026057	PC-Esterase	135	426
IPR025846	TBL_N	81	134

External Links

No external refs found!

SOLTUB.AGRIA.G00000030470

Expression Profile

Co-expression Networks

Functional Annotation