SOLTUB.AGRIA.G00000030806


Description : Transcription factor GTE6


Gene families : OG_02_0010419 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000030806
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_46


Type GO Term Name Evidence Source
BP GO:0000083 regulation of transcription involved in G1/S transition of mitotic cell cycle IEA AHRD
CC GO:0000785 chromatin IEA AHRD
CC GO:0000794 condensed nuclear chromosome IEA AHRD
BP GO:0001207 obsolete histone displacement IEA AHRD
BP GO:0001833 inner cell mass cell proliferation IEA AHRD
BP GO:0001843 neural tube closure IEA AHRD
MF GO:0002039 p53 binding IEA AHRD
BP GO:0002574 thrombocyte differentiation IEA AHRD
MF GO:0003677 DNA binding IEA AHRD
MF GO:0003682 chromatin binding IEA AHRD
MF GO:0003713 transcription coactivator activity IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
BP GO:0006334 nucleosome assembly IEA AHRD
BP GO:0006338 chromatin remodeling IEA AHRD
BP GO:0007059 chromosome segregation IEA AHRD
BP GO:0007141 male meiosis I IEA AHRD
BP GO:0007283 spermatogenesis IEA AHRD
CC GO:0008024 cyclin/CDK positive transcription elongation factor complex IEA AHRD
MF GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity IEA AHRD
BP GO:0009294 DNA-mediated transformation IEA AHRD
BP GO:0010030 positive regulation of seed germination IEA AHRD
BP GO:0010971 positive regulation of G2/M transition of mitotic cell cycle IEA AHRD
CC GO:0016607 nuclear speck IEA AHRD
BP GO:0032968 positive regulation of transcription elongation by RNA polymerase II IEA AHRD
MF GO:0034211 GTP-dependent protein kinase activity IEA AHRD
BP GO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling IEA AHRD
BP GO:0043388 positive regulation of DNA binding IEA AHRD
BP GO:0043484 regulation of RNA splicing IEA AHRD
BP GO:0043922 negative regulation by host of viral transcription IEA AHRD
BP GO:0043983 histone H4-K12 acetylation IEA AHRD
BP GO:0044154 histone H3-K14 acetylation IEA AHRD
BP GO:0046777 protein autophosphorylation IEA AHRD
BP GO:0050727 regulation of inflammatory response IEA AHRD
BP GO:0051039 positive regulation of transcription involved in meiotic cell cycle IEA AHRD
MF GO:0070577 lysine-acetylated histone binding IEA AHRD
MF GO:0099122 RNA polymerase II C-terminal domain binding IEA AHRD
MF GO:0106140 P-TEFb complex binding IEA AHRD
BP GO:1901407 regulation of phosphorylation of RNA polymerase II C-terminal domain IEA AHRD
BP GO:2000002 negative regulation of DNA damage checkpoint IEA AHRD
BP GO:2001255 positive regulation of histone H3-K36 trimethylation IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000018 regulation of DNA recombination IEP Predict GO terms from Neighborhoods
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Predict GO terms from Neighborhoods
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predict GO terms from Neighborhoods
CC GO:0000932 P-body IEP Predict GO terms from Neighborhoods
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000966 RNA 5'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0000967 rRNA 5'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0001505 regulation of neurotransmitter levels IEP Predict GO terms from Neighborhoods
MF GO:0001664 G protein-coupled receptor binding IEP Predict GO terms from Neighborhoods
BP GO:0001745 compound eye morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0002244 hematopoietic progenitor cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0002697 regulation of immune effector process IEP Predict GO terms from Neighborhoods
BP GO:0002700 regulation of production of molecular mediator of immune response IEP Predict GO terms from Neighborhoods
BP GO:0002759 regulation of antimicrobial humoral response IEP Predict GO terms from Neighborhoods
BP GO:0002784 regulation of antimicrobial peptide production IEP Predict GO terms from Neighborhoods
BP GO:0002786 regulation of antibacterial peptide production IEP Predict GO terms from Neighborhoods
BP GO:0002920 regulation of humoral immune response IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Predict GO terms from Neighborhoods
CC GO:0005654 nucleoplasm IEP Predict GO terms from Neighborhoods
CC GO:0005684 U2-type spliceosomal complex IEP Predict GO terms from Neighborhoods
CC GO:0005688 U6 snRNP IEP Predict GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Predict GO terms from Neighborhoods
CC GO:0005771 multivesicular body IEP Predict GO terms from Neighborhoods
CC GO:0005795 Golgi stack IEP Predict GO terms from Neighborhoods
CC GO:0005802 trans-Golgi network IEP Predict GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006261 DNA-templated DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006282 regulation of DNA repair IEP Predict GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006471 protein ADP-ribosylation IEP Predict GO terms from Neighborhoods
BP GO:0006836 neurotransmitter transport IEP Predict GO terms from Neighborhoods
BP GO:0006892 post-Golgi vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0006893 Golgi to plasma membrane transport IEP Predict GO terms from Neighborhoods
BP GO:0007030 Golgi organization IEP Predict GO terms from Neighborhoods
BP GO:0007112 male meiosis cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0007264 small GTPase mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0007265 Ras protein signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0007269 neurotransmitter secretion IEP Predict GO terms from Neighborhoods
BP GO:0007431 salivary gland development IEP Predict GO terms from Neighborhoods
BP GO:0007444 imaginal disc development IEP Predict GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predict GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Predict GO terms from Neighborhoods
CC GO:0009330 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex IEP Predict GO terms from Neighborhoods
BP GO:0009631 cold acclimation IEP Predict GO terms from Neighborhoods
BP GO:0009742 brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009913 epidermal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0010090 trichome morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010275 NAD(P)H dehydrogenase complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0010324 membrane invagination IEP Predict GO terms from Neighborhoods
BP GO:0010569 regulation of double-strand break repair via homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:0010883 regulation of lipid storage IEP Predict GO terms from Neighborhoods
BP GO:0014041 regulation of neuron maturation IEP Predict GO terms from Neighborhoods
BP GO:0014042 positive regulation of neuron maturation IEP Predict GO terms from Neighborhoods
MF GO:0016004 phospholipase activator activity IEP Predict GO terms from Neighborhoods
MF GO:0016018 cyclosporin A binding IEP Predict GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0017069 snRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0017070 U6 snRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0018208 peptidyl-proline modification IEP Predict GO terms from Neighborhoods
MF GO:0019208 phosphatase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0019888 protein phosphatase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0023061 signal release IEP Predict GO terms from Neighborhoods
MF GO:0030234 enzyme regulator activity IEP Predict GO terms from Neighborhoods
CC GO:0030289 protein phosphatase 4 complex IEP Predict GO terms from Neighborhoods
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
MF GO:0030544 Hsp70 protein binding IEP Predict GO terms from Neighborhoods
BP GO:0030855 epithelial cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0031001 response to brefeldin A IEP Predict GO terms from Neighborhoods
CC GO:0031984 organelle subcompartment IEP Predict GO terms from Neighborhoods
BP GO:0032011 ARF protein signal transduction IEP Predict GO terms from Neighborhoods
CC GO:0032154 cleavage furrow IEP Predict GO terms from Neighborhoods
BP GO:0032506 cytokinetic process IEP Predict GO terms from Neighborhoods
BP GO:0033157 regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0033206 meiotic cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0033227 dsRNA transport IEP Predict GO terms from Neighborhoods
BP GO:0033363 secretory granule organization IEP Predict GO terms from Neighborhoods
BP GO:0034067 protein localization to Golgi apparatus IEP Predict GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0034471 ncRNA 5'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035220 wing disc development IEP Predict GO terms from Neighborhoods
BP GO:0035295 tube development IEP Predict GO terms from Neighborhoods
BP GO:0036090 cleavage furrow ingression IEP Predict GO terms from Neighborhoods
BP GO:0036260 RNA capping IEP Predict GO terms from Neighborhoods
BP GO:0042023 DNA endoreduplication IEP Predict GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0043001 Golgi to plasma membrane protein transport IEP Predict GO terms from Neighborhoods
BP GO:0044786 cell cycle DNA replication IEP Predict GO terms from Neighborhoods
CC GO:0045171 intercellular bridge IEP Predict GO terms from Neighborhoods
CC GO:0045177 apical part of cell IEP Predict GO terms from Neighborhoods
BP GO:0045292 mRNA cis splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0045664 regulation of neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045807 positive regulation of endocytosis IEP Predict GO terms from Neighborhoods
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predict GO terms from Neighborhoods
BP GO:0046677 response to antibiotic IEP Predict GO terms from Neighborhoods
BP GO:0046686 response to cadmium ion IEP Predict GO terms from Neighborhoods
BP GO:0048364 root development IEP Predict GO terms from Neighborhoods
BP GO:0048488 synaptic vesicle endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0048592 eye morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048872 homeostasis of number of cells IEP Predict GO terms from Neighborhoods
MF GO:0050780 dopamine receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0060229 lipase activator activity IEP Predict GO terms from Neighborhoods
BP GO:0060429 epithelium development IEP Predict GO terms from Neighborhoods
BP GO:0060628 regulation of ER to Golgi vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0061083 regulation of protein refolding IEP Predict GO terms from Neighborhoods
BP GO:0061484 hematopoietic stem cell homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0061640 cytoskeleton-dependent cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0061951 establishment of protein localization to plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0070861 regulation of protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0071005 U2-type precatalytic spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071011 precatalytic spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0090158 endoplasmic reticulum membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090354 regulation of auxin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090596 sensory organ morphogenesis IEP Predict GO terms from Neighborhoods
CC GO:0097525 spliceosomal snRNP complex IEP Predict GO terms from Neighborhoods
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predict GO terms from Neighborhoods
MF GO:0098772 molecular function regulator activity IEP Predict GO terms from Neighborhoods
CC GO:0098791 Golgi apparatus subcompartment IEP Predict GO terms from Neighborhoods
CC GO:0098793 presynapse IEP Predict GO terms from Neighborhoods
BP GO:0098876 vesicle-mediated transport to the plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0099003 vesicle-mediated transport in synapse IEP Predict GO terms from Neighborhoods
BP GO:0099024 plasma membrane invagination IEP Predict GO terms from Neighborhoods
BP GO:0099643 signal release from synapse IEP Predict GO terms from Neighborhoods
BP GO:0110037 regulation of nematode male tail tip morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0110039 positive regulation of nematode male tail tip morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0110154 RNA decapping IEP Predict GO terms from Neighborhoods
BP GO:0110156 methylguanosine-cap decapping IEP Predict GO terms from Neighborhoods
CC GO:0120114 Sm-like protein family complex IEP Predict GO terms from Neighborhoods
CC GO:0120115 Lsm2-8 complex IEP Predict GO terms from Neighborhoods
BP GO:0140238 presynaptic endocytosis IEP Predict GO terms from Neighborhoods
BP GO:1902410 mitotic cytokinetic process IEP Predict GO terms from Neighborhoods
BP GO:1903292 protein localization to Golgi membrane IEP Predict GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Predict GO terms from Neighborhoods
BP GO:1903332 regulation of protein folding IEP Predict GO terms from Neighborhoods
BP GO:1903429 regulation of cell maturation IEP Predict GO terms from Neighborhoods
BP GO:1903431 positive regulation of cell maturation IEP Predict GO terms from Neighborhoods
BP GO:1904799 regulation of neuron remodeling IEP Predict GO terms from Neighborhoods
BP GO:1904801 positive regulation of neuron remodeling IEP Predict GO terms from Neighborhoods
BP GO:1905323 telomerase holoenzyme complex assembly IEP Predict GO terms from Neighborhoods
BP GO:1990386 mitotic cleavage furrow ingression IEP Predict GO terms from Neighborhoods
CC GO:1990726 Lsm1-7-Pat1 complex IEP Predict GO terms from Neighborhoods
BP GO:2000779 regulation of double-strand break repair IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR027353 NET_dom 267 328
IPR001487 Bromodomain 107 191
IPR036427 Bromodomain-like_sf 90 213
No external refs found!