Description : tRNA pseudouridine synthase
Gene families : OG_02_0033097 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000030948 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_177 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEA | AHRD |
| MF | GO:0009982 | pseudouridine synthase activity | IEA | AHRD |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000054 | ribosomal subunit export from nucleus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000138 | Golgi trans cisterna | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000460 | maturation of 5.8S rRNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001508 | action potential | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001732 | formation of cytoplasmic translation initiation complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002238 | response to molecule of fungal origin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002239 | response to oomycetes | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002943 | tRNA dihydrouridine synthesis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004029 | aldehyde dehydrogenase (NAD+) activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004030 | aldehyde dehydrogenase [NAD(P)+] activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004096 | catalase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004743 | pyruvate kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005365 | myo-inositol transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005638 | lamin filament | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005880 | nuclear microtubule | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005882 | intermediate filament | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006265 | DNA topological change | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007569 | obsolete cell aging | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008219 | cell death | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008296 | 3'-5'-exodeoxyribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009269 | response to desiccation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009411 | response to UV | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009558 | embryo sac cellularization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009663 | plasmodesma organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009699 | phenylpropanoid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009749 | response to glucose | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009804 | coumarin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009805 | coumarin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009812 | flavonoid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009813 | flavonoid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009921 | auxin efflux carrier complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010039 | response to iron ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010215 | cellulose microfibril organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010224 | response to UV-B | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010245 | radial microtubular system formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010252 | auxin homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010338 | leaf formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010421 | hydrogen peroxide-mediated programmed cell death | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010981 | regulation of cell wall macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0012501 | programmed cell death | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015148 | D-xylose transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015166 | polyol transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015168 | glycerol transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015575 | mannitol transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015576 | sorbitol transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015591 | D-ribose transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015791 | polyol transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016107 | sesquiterpenoid catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016757 | glycosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0017014 | protein nitrosylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030016 | myofibril | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030955 | potassium ion binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031420 | alkali metal ion binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0033290 | eukaryotic 48S preinitiation complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033483 | gas homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033484 | nitric oxide homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033750 | ribosome localization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0033838 | flavonol-3-O-glucoside glucosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034450 | ubiquitin-ubiquitin ligase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035278 | miRNA-mediated gene silencing by inhibition of translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036473 | cell death in response to oxidative stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036474 | cell death in response to hydrogen peroxide | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042255 | ribosome assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042256 | mature ribosome assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043290 | apocarotenoid catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043292 | contractile fiber | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0044304 | main axon | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045652 | regulation of megakaryocyte differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046345 | abscisic acid catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047230 | flavonol-3-O-glucoside L-rhamnosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0048531 | beta-1,3-galactosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050665 | hydrogen peroxide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051213 | dioxygenase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051566 | anthocyanidin-3-glucoside rhamnosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051880 | G-quadruplex DNA binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070461 | SAGA-type complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070925 | organelle assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071103 | DNA conformation change | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071368 | cellular response to cytokinin stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071395 | cellular response to jasmonic acid stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072329 | monocarboxylic acid catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0080045 | quercetin 3'-O-glucosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080162 | endoplasmic reticulum to cytosol auxin transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0086001 | cardiac muscle cell action potential | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0086065 | cell communication involved in cardiac conduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097468 | programmed cell death in response to reactive oxygen species | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0099081 | supramolecular polymer | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0099512 | supramolecular fiber | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0106145 | scopoletin 8-hydroxylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0106147 | fraxetin biosynthesis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0106413 | dihydrouridine synthase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0120256 | olefinic compound catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140115 | export across plasma membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140694 | non-membrane-bounded organelle assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901038 | cyanidin 3-O-glucoside metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990403 | embryonic brain development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990641 | response to iron ion starvation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001009 | regulation of plant-type cell wall cellulose biosynthetic process | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |