SOLTUB.AGRIA.G00000031029


Description : RPA-interacting B


Gene families : OG_02_0003116 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000031029
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_32


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Predict GO terms from Neighborhoods
CC GO:0000323 lytic vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000325 plant-type vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000331 contractile vacuole IEP Predict GO terms from Neighborhoods
MF GO:0005344 oxygen carrier activity IEP Predict GO terms from Neighborhoods
MF GO:0005483 soluble NSF attachment protein activity IEP Predict GO terms from Neighborhoods
MF GO:0005484 SNAP receptor activity IEP Predict GO terms from Neighborhoods
CC GO:0005764 lysosome IEP Predict GO terms from Neighborhoods
CC GO:0005767 secondary lysosome IEP Predict GO terms from Neighborhoods
CC GO:0005774 vacuolar membrane IEP Predict GO terms from Neighborhoods
CC GO:0005776 autophagosome IEP Predict GO terms from Neighborhoods
BP GO:0006623 protein targeting to vacuole IEP Predict GO terms from Neighborhoods
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0006892 post-Golgi vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0006896 Golgi to vacuole transport IEP Predict GO terms from Neighborhoods
BP GO:0006906 vesicle fusion IEP Predict GO terms from Neighborhoods
BP GO:0006914 autophagy IEP Predict GO terms from Neighborhoods
BP GO:0007030 Golgi organization IEP Predict GO terms from Neighborhoods
BP GO:0007033 vacuole organization IEP Predict GO terms from Neighborhoods
BP GO:0007034 vacuolar transport IEP Predict GO terms from Neighborhoods
CC GO:0008021 synaptic vesicle IEP Predict GO terms from Neighborhoods
BP GO:0009630 gravitropism IEP Predict GO terms from Neighborhoods
CC GO:0012507 ER to Golgi transport vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0015669 gas transport IEP Predict GO terms from Neighborhoods
BP GO:0015671 oxygen transport IEP Predict GO terms from Neighborhoods
BP GO:0016032 viral process IEP Predict GO terms from Neighborhoods
BP GO:0016050 vesicle organization IEP Predict GO terms from Neighborhoods
BP GO:0016197 endosomal transport IEP Predict GO terms from Neighborhoods
BP GO:0016236 macroautophagy IEP Predict GO terms from Neighborhoods
BP GO:0016482 cytosolic transport IEP Predict GO terms from Neighborhoods
CC GO:0018995 host cellular component IEP Predict GO terms from Neighborhoods
MF GO:0019825 oxygen binding IEP Predict GO terms from Neighborhoods
CC GO:0030133 transport vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030135 coated vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030136 clathrin-coated vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030139 endocytic vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030173 integral component of Golgi membrane IEP Predict GO terms from Neighborhoods
CC GO:0030658 transport vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030662 coated vesicle membrane IEP Predict GO terms from Neighborhoods
MF GO:0030674 protein-macromolecule adaptor activity IEP Predict GO terms from Neighborhoods
CC GO:0031201 SNARE complex IEP Predict GO terms from Neighborhoods
CC GO:0031228 intrinsic component of Golgi membrane IEP Predict GO terms from Neighborhoods
CC GO:0031301 integral component of organelle membrane IEP Predict GO terms from Neighborhoods
CC GO:0031902 late endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0032010 phagolysosome IEP Predict GO terms from Neighborhoods
BP GO:0042144 vacuole fusion, non-autophagic IEP Predict GO terms from Neighborhoods
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predict GO terms from Neighborhoods
CC GO:0043657 host cell IEP Predict GO terms from Neighborhoods
CC GO:0044306 neuron projection terminus IEP Predict GO terms from Neighborhoods
CC GO:0045335 phagocytic vesicle IEP Predict GO terms from Neighborhoods
BP GO:0046786 viral replication complex formation and maintenance IEP Predict GO terms from Neighborhoods
BP GO:0046794 transport of virus IEP Predict GO terms from Neighborhoods
BP GO:0048284 organelle fusion IEP Predict GO terms from Neighborhoods
BP GO:0050879 multicellular organismal movement IEP Predict GO terms from Neighborhoods
BP GO:0050881 musculoskeletal movement IEP Predict GO terms from Neighborhoods
BP GO:0050882 voluntary musculoskeletal movement IEP Predict GO terms from Neighborhoods
BP GO:0050905 neuromuscular process IEP Predict GO terms from Neighborhoods
CC GO:0055037 recycling endosome IEP Predict GO terms from Neighborhoods
MF GO:0060090 molecular adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:0061025 membrane fusion IEP Predict GO terms from Neighborhoods
BP GO:0061919 process utilizing autophagic mechanism IEP Predict GO terms from Neighborhoods
CC GO:0070382 exocytic vesicle IEP Predict GO terms from Neighborhoods
BP GO:0072665 protein localization to vacuole IEP Predict GO terms from Neighborhoods
BP GO:0072666 establishment of protein localization to vacuole IEP Predict GO terms from Neighborhoods
BP GO:0075733 intracellular transport of virus IEP Predict GO terms from Neighborhoods
BP GO:0090161 Golgi ribbon formation IEP Predict GO terms from Neighborhoods
BP GO:0090174 organelle membrane fusion IEP Predict GO terms from Neighborhoods
BP GO:0097576 vacuole fusion IEP Predict GO terms from Neighborhoods
CC GO:0098852 lytic vacuole membrane IEP Predict GO terms from Neighborhoods
CC GO:0099503 secretory vesicle IEP Predict GO terms from Neighborhoods
MF GO:0140104 molecular carrier activity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR028159 RPA_interact_C_dom 263 344
IPR028158 RPA_interact_N_dom 18 52
IPR028155 RPA_interact_central 182 248
IPR028155 RPA_interact_central 65 131
No external refs found!