SOLTUB.AGRIA.G00000031257

Description : Ras-related protein Rab-11A

Gene families : OG_02_0016507 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000031257
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_71

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0000226	microtubule cytoskeleton organization	None	Extended
BP	GO:0000280	nuclear division	None	Extended
BP	GO:0000910	cytokinesis	None	Extended
BP	GO:0000911	cytokinesis by cell plate formation	IEA	AHRD
BP	GO:0001558	regulation of cell growth	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005525	GTP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	IEA	AHRD
CC	GO:0005768	endosome	None	Extended
CC	GO:0005774	vacuolar membrane	IEA	AHRD
CC	GO:0005795	Golgi stack	IEA	AHRD
CC	GO:0005798	Golgi-associated vesicle	IEA	AHRD
CC	GO:0005813	centrosome	IEA	AHRD
CC	GO:0005815	microtubule organizing center	None	Extended
CC	GO:0005819	spindle	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006887	exocytosis	IEA	AHRD
BP	GO:0006891	intra-Golgi vesicle-mediated transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007051	spindle organization	IEA	AHRD
MF	GO:0008092	cytoskeletal protein binding	IEA	AHRD
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	IEA	AHRD
CC	GO:0009504	cell plate	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0010008	endosome membrane	None	Extended
BP	GO:0010564	regulation of cell cycle process	IEA	AHRD
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010720	positive regulation of cell development	None	Extended
BP	GO:0010975	regulation of neuron projection development	None	Extended
CC	GO:0012506	vesicle membrane	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016197	endosomal transport	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0030133	transport vesicle	IEA	AHRD
BP	GO:0030307	positive regulation of cell growth	None	Extended
CC	GO:0030424	axon	IEA	AHRD
CC	GO:0030427	site of polarized growth	None	Extended
BP	GO:0030516	regulation of axon extension	None	Extended
CC	GO:0030659	cytoplasmic vesicle membrane	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0031344	regulation of cell projection organization	None	Extended
BP	GO:0031346	positive regulation of cell projection organization	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
BP	GO:0031503	protein-containing complex localization	None	Extended
CC	GO:0031901	early endosome membrane	IEA	AHRD
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0032400	melanosome localization	None	Extended
BP	GO:0032401	establishment of melanosome localization	None	Extended
BP	GO:0032402	melanosome transport	IEA	AHRD
BP	GO:0032456	endocytic recycling	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
CC	GO:0032588	trans-Golgi network membrane	IEA	AHRD
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0032880	regulation of protein localization	None	Extended
BP	GO:0032940	secretion by cell	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0034394	protein localization to cell surface	IEA	AHRD
BP	GO:0035418	protein localization to synapse	None	Extended
CC	GO:0035619	root hair tip	IEA	AHRD
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
CC	GO:0035838	growing cell tip	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042546	cell wall biogenesis	IEA	AHRD
CC	GO:0042995	cell projection	None	Extended
CC	GO:0043005	neuron projection	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
CC	GO:0045202	synapse	None	Extended
BP	GO:0045595	regulation of cell differentiation	None	Extended
BP	GO:0045597	positive regulation of cell differentiation	None	Extended
BP	GO:0045773	positive regulation of axon extension	IEA	AHRD
BP	GO:0045927	positive regulation of growth	None	Extended
BP	GO:0046903	secretion	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048167	regulation of synaptic plasticity	None	Extended
BP	GO:0048168	regulation of neuronal synaptic plasticity	None	Extended
BP	GO:0048169	regulation of long-term neuronal synaptic plasticity	IEA	AHRD
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0048219	inter-Golgi cisterna vesicle-mediated transport	IEA	AHRD
BP	GO:0048285	organelle fission	None	Extended
CC	GO:0048471	perinuclear region of cytoplasm	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048639	positive regulation of developmental growth	None	Extended
BP	GO:0050767	regulation of neurogenesis	None	Extended
BP	GO:0050769	positive regulation of neurogenesis	None	Extended
BP	GO:0050770	regulation of axonogenesis	None	Extended
BP	GO:0050772	positive regulation of axonogenesis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050804	modulation of chemical synaptic transmission	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051094	positive regulation of developmental process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051223	regulation of protein transport	IEA	AHRD
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051240	positive regulation of multicellular organismal process	None	Extended
CC	GO:0051286	cell tip	None	Extended
BP	GO:0051640	organelle localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051648	vesicle localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051650	establishment of vesicle localization	None	Extended
BP	GO:0051656	establishment of organelle localization	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0051875	pigment granule localization	None	Extended
BP	GO:0051904	pigment granule transport	None	Extended
BP	GO:0051905	establishment of pigment granule localization	None	Extended
BP	GO:0051960	regulation of nervous system development	None	Extended
BP	GO:0051962	positive regulation of nervous system development	None	Extended
CC	GO:0055037	recycling endosome	None	Extended
CC	GO:0060187	cell pole	None	Extended
BP	GO:0060284	regulation of cell development	None	Extended
BP	GO:0060341	regulation of cellular localization	None	Extended
BP	GO:0061387	regulation of extent of cell growth	None	Extended
BP	GO:0061951	establishment of protein localization to plasma membrane	None	Extended
BP	GO:0062237	protein localization to postsynapse	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0070201	regulation of establishment of protein localization	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0070925	organelle assembly	IEA	AHRD
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0072659	protein localization to plasma membrane	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
CC	GO:0090404	pollen tube tip	IEA	AHRD
BP	GO:0097120	receptor localization to synapse	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098685	Schaffer collateral - CA1 synapse	IEA	AHRD
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0098837	postsynaptic recycling endosome	IEA	AHRD
CC	GO:0098845	postsynaptic endosome	None	Extended
BP	GO:0098876	vesicle-mediated transport to the plasma membrane	None	Extended
BP	GO:0098877	neurotransmitter receptor transport to plasma membrane	None	Extended
BP	GO:0098887	neurotransmitter receptor transport, endosome to postsynaptic membrane	IEA	AHRD
BP	GO:0098969	neurotransmitter receptor transport to postsynaptic membrane	None	Extended
CC	GO:0098978	glutamatergic synapse	IEA	AHRD
BP	GO:0099003	vesicle-mediated transport in synapse	IEA	AHRD
BP	GO:0099072	regulation of postsynaptic membrane neurotransmitter receptor levels	None	Extended
BP	GO:0099177	regulation of trans-synaptic signaling	None	Extended
BP	GO:0099637	neurotransmitter receptor transport	None	Extended
BP	GO:0099638	endosome to plasma membrane protein transport	None	Extended
BP	GO:0099639	neurotransmitter receptor transport, endosome to plasma membrane	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0120025	plasma membrane bounded cell projection	None	Extended
BP	GO:0120035	regulation of plasma membrane bounded cell projection organization	None	Extended
BP	GO:0140014	mitotic nuclear division	IEA	AHRD
BP	GO:0140352	export from cell	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1902414	protein localization to cell junction	None	Extended
BP	GO:1903047	mitotic cell cycle process	None	Extended
BP	GO:1903076	regulation of protein localization to plasma membrane	None	Extended
BP	GO:1903078	positive regulation of protein localization to plasma membrane	IEA	AHRD
BP	GO:1903539	protein localization to postsynaptic membrane	None	Extended
BP	GO:1903540	establishment of protein localization to postsynaptic membrane	None	Extended
BP	GO:1903829	positive regulation of protein localization	None	Extended
BP	GO:1904375	regulation of protein localization to cell periphery	None	Extended
BP	GO:1904377	positive regulation of protein localization to cell periphery	None	Extended
BP	GO:1905475	regulation of protein localization to membrane	None	Extended
BP	GO:1905477	positive regulation of protein localization to membrane	None	Extended
BP	GO:1990778	protein localization to cell periphery	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000030	mannosyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0000138	Golgi trans cisterna	IEP	Predict GO terms from Neighborhoods
CC	GO:0000139	Golgi membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0005797	Golgi medial cisterna	IEP	Predict GO terms from Neighborhoods
CC	GO:0005802	trans-Golgi network	IEP	Predict GO terms from Neighborhoods
BP	GO:0005976	polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006080	substituted mannan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006949	syncytium formation	IEP	Predict GO terms from Neighborhoods
MF	GO:0008171	O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008378	galactosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009292	horizontal gene transfer	IEP	Predict GO terms from Neighborhoods
BP	GO:0009294	DNA-mediated transformation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009624	response to nematode	IEP	Predict GO terms from Neighborhoods
BP	GO:0009828	plant-type cell wall loosening	IEP	Predict GO terms from Neighborhoods
BP	GO:0010090	trichome morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010191	mucilage metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010192	mucilage biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010392	galactoglucomannan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010411	xyloglucan metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0015630	microtubule cytoskeleton	IEP	Predict GO terms from Neighborhoods
MF	GO:0016757	glycosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016758	hexosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016763	pentosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	Predict GO terms from Neighborhoods
MF	GO:0019187	beta-1,4-mannosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0030570	pectate lyase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0031985	Golgi cisterna	IEP	Predict GO terms from Neighborhoods
MF	GO:0035252	UDP-xylosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0042285	xylosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0042409	caffeoyl-CoA O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042545	cell wall modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	Predict GO terms from Neighborhoods
MF	GO:0042803	protein homodimerization activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045229	external encapsulating structure organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0045490	pectin catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0047259	glucomannan 4-beta-mannosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048359	mucilage metabolic process involved in seed coat development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048868	pollen tube development	IEP	Predict GO terms from Neighborhoods
BP	GO:0051069	galactomannan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051070	galactomannan biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0051753	mannan synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071555	cell wall organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0080076	caffeoyl CoA:S-adenosyl-L-methionine O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0097502	mannosylation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR027417	P-loop_NTPase	3	222
IPR005225	Small_GTP-bd_dom	7	108
IPR001806	Small_GTPase	151	213
IPR001806	Small_GTPase	10	108

External Links

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SOLTUB.AGRIA.G00000031257

Expression Profile

Co-expression Networks

Functional Annotation