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  5. SOLTUB.AGRIA.G00000031444

SOLTUB.AGRIA.G00000031444


Description : NHL repeat-containing protein 2


Gene families : OG_02_0004088 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000031444
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_251


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA AHRD
CC GO:0005829 cytosol IEA AHRD
CC GO:0009534 chloroplast thylakoid IEA AHRD
CC GO:0042651 thylakoid membrane IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0000154 rRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0000212 meiotic spindle organization IEP Predict GO terms from Neighborhoods
BP GO:0000278 mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predict GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predict GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000469 cleavage involved in rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0000478 endonucleolytic cleavage involved in rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
CC GO:0000940 outer kinetochore IEP Predict GO terms from Neighborhoods
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0001510 RNA methylation IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003730 mRNA 3'-UTR binding IEP Predict GO terms from Neighborhoods
MF GO:0003774 cytoskeletal motor activity IEP Predict GO terms from Neighborhoods
MF GO:0003777 microtubule motor activity IEP Predict GO terms from Neighborhoods
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004930 G protein-coupled receptor activity IEP Predict GO terms from Neighborhoods
CC GO:0005654 nucleoplasm IEP Predict GO terms from Neighborhoods
CC GO:0005681 spliceosomal complex IEP Predict GO terms from Neighborhoods
CC GO:0005684 U2-type spliceosomal complex IEP Predict GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Predict GO terms from Neighborhoods
CC GO:0005828 kinetochore microtubule IEP Predict GO terms from Neighborhoods
CC GO:0005847 mRNA cleavage and polyadenylation specificity factor complex IEP Predict GO terms from Neighborhoods
CC GO:0005849 mRNA cleavage factor complex IEP Predict GO terms from Neighborhoods
CC GO:0005871 kinesin complex IEP Predict GO terms from Neighborhoods
CC GO:0005875 microtubule associated complex IEP Predict GO terms from Neighborhoods
CC GO:0005876 spindle microtubule IEP Predict GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006378 mRNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0006379 mRNA cleavage IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006402 mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006417 regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0006558 L-phenylalanine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006570 tyrosine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006571 tyrosine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007052 mitotic spindle organization IEP Predict GO terms from Neighborhoods
BP GO:0007056 spindle assembly involved in female meiosis IEP Predict GO terms from Neighborhoods
BP GO:0007057 spindle assembly involved in female meiosis I IEP Predict GO terms from Neighborhoods
BP GO:0007079 mitotic chromosome movement towards spindle pole IEP Predict GO terms from Neighborhoods
BP GO:0007088 regulation of mitotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0007094 mitotic spindle assembly checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007202 activation of phospholipase C activity IEP Predict GO terms from Neighborhoods
BP GO:0007249 I-kappaB kinase/NF-kappaB signaling IEP Predict GO terms from Neighborhoods
BP GO:0007292 female gamete generation IEP Predict GO terms from Neighborhoods
MF GO:0008169 C-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008173 RNA methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Predict GO terms from Neighborhoods
MF GO:0008574 plus-end-directed microtubule motor activity IEP Predict GO terms from Neighborhoods
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Predict GO terms from Neighborhoods
MF GO:0008649 rRNA methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predict GO terms from Neighborhoods
MF GO:0009383 rRNA (cytosine-C5-)-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009645 response to low light intensity stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009736 cytokinin-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009742 brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009785 blue light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009939 positive regulation of gibberellic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010162 seed dormancy process IEP Predict GO terms from Neighborhoods
BP GO:0010231 maintenance of seed dormancy IEP Predict GO terms from Neighborhoods
BP GO:0010244 response to low fluence blue light stimulus by blue low-fluence system IEP Predict GO terms from Neighborhoods
BP GO:0010252 auxin homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0010517 regulation of phospholipase activity IEP Predict GO terms from Neighborhoods
BP GO:0010518 positive regulation of phospholipase activity IEP Predict GO terms from Neighborhoods
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010608 post-transcriptional regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010863 positive regulation of phospholipase C activity IEP Predict GO terms from Neighborhoods
BP GO:0010919 regulation of inositol phosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Predict GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016073 snRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016180 snRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0016434 rRNA (cytosine) methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0017069 snRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0017070 U6 snRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0019208 phosphatase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0019220 regulation of phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019888 protein phosphatase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0021537 telencephalon development IEP Predict GO terms from Neighborhoods
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Predict GO terms from Neighborhoods
BP GO:0022611 dormancy process IEP Predict GO terms from Neighborhoods
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Predict GO terms from Neighborhoods
MF GO:0030234 enzyme regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0030490 maturation of SSU-rRNA IEP Predict GO terms from Neighborhoods
CC GO:0030496 midbody IEP Predict GO terms from Neighborhoods
BP GO:0030522 intracellular receptor signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0030684 preribosome IEP Predict GO terms from Neighborhoods
BP GO:0031123 RNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031124 mRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031167 rRNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031325 positive regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031577 spindle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0032960 regulation of inositol trisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0033045 regulation of sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033046 negative regulation of sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033674 positive regulation of kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0034248 regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0034472 snRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0034477 U6 snRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035196 miRNA processing IEP Predict GO terms from Neighborhoods
CC GO:0035371 microtubule plus-end IEP Predict GO terms from Neighborhoods
BP GO:0035556 intracellular signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0043085 positive regulation of catalytic activity IEP Predict GO terms from Neighborhoods
MF GO:0043515 kinetochore binding IEP Predict GO terms from Neighborhoods
BP GO:0043631 RNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0044093 positive regulation of molecular function IEP Predict GO terms from Neighborhoods
CC GO:0044214 spanning component of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0045839 negative regulation of mitotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0045840 positive regulation of mitotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP Predict GO terms from Neighborhoods
BP GO:0045842 positive regulation of mitotic metaphase/anaphase transition IEP Predict GO terms from Neighborhoods
BP GO:0045860 positive regulation of protein kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0045931 positive regulation of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0048477 oogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048522 positive regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0048609 multicellular organismal reproductive process IEP Predict GO terms from Neighborhoods
BP GO:0050000 chromosome localization IEP Predict GO terms from Neighborhoods
MF GO:0050265 RNA uridylyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0050779 RNA destabilization IEP Predict GO terms from Neighborhoods
BP GO:0050790 regulation of catalytic activity IEP Predict GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051174 regulation of phosphorus metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051225 spindle assembly IEP Predict GO terms from Neighborhoods
CC GO:0051233 spindle midzone IEP Predict GO terms from Neighborhoods
BP GO:0051246 regulation of protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051247 positive regulation of protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051303 establishment of chromosome localization IEP Predict GO terms from Neighborhoods
BP GO:0051305 chromosome movement towards spindle pole IEP Predict GO terms from Neighborhoods
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Predict GO terms from Neighborhoods
BP GO:0051345 positive regulation of hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0051382 kinetochore assembly IEP Predict GO terms from Neighborhoods
BP GO:0051383 kinetochore organization IEP Predict GO terms from Neighborhoods
BP GO:0051784 negative regulation of nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0051785 positive regulation of nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0051983 regulation of chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0051984 positive regulation of chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0051985 negative regulation of chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0051987 positive regulation of attachment of spindle microtubules to kinetochore IEP Predict GO terms from Neighborhoods
BP GO:0051988 regulation of attachment of spindle microtubules to kinetochore IEP Predict GO terms from Neighborhoods
BP GO:0060147 regulation of post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0060191 regulation of lipase activity IEP Predict GO terms from Neighborhoods
BP GO:0060193 positive regulation of lipase activity IEP Predict GO terms from Neighborhoods
BP GO:0060966 regulation of gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0061014 positive regulation of mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0061157 mRNA destabilization IEP Predict GO terms from Neighborhoods
MF GO:0061632 RNA lariat debranching enzyme activator activity IEP Predict GO terms from Neighborhoods
BP GO:0065007 biological regulation IEP Predict GO terms from Neighborhoods
BP GO:0070475 rRNA base methylation IEP Predict GO terms from Neighborhoods
MF GO:0070566 adenylyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0070569 uridylyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0070918 small regulatory ncRNA processing IEP Predict GO terms from Neighborhoods
CC GO:0071005 U2-type precatalytic spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071011 precatalytic spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071014 post-mRNA release spliceosomal complex IEP Predict GO terms from Neighborhoods
BP GO:0071173 spindle assembly checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0071174 mitotic spindle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0071483 cellular response to blue light IEP Predict GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0089717 spanning component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090306 meiotic spindle assembly IEP Predict GO terms from Neighborhoods
BP GO:0090307 mitotic spindle assembly IEP Predict GO terms from Neighborhoods
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEP Predict GO terms from Neighborhoods
BP GO:0097437 maintenance of dormancy IEP Predict GO terms from Neighborhoods
MF GO:0098772 molecular function regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0098787 mRNA cleavage involved in mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0098789 pre-mRNA cleavage required for polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0099606 microtubule plus-end directed mitotic chromosome migration IEP Predict GO terms from Neighborhoods
BP GO:0099607 lateral attachment of mitotic spindle microtubules to kinetochore IEP Predict GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Predict GO terms from Neighborhoods
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predict GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Predict GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Predict GO terms from Neighborhoods
BP GO:1900274 regulation of phospholipase C activity IEP Predict GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901970 positive regulation of mitotic sister chromatid separation IEP Predict GO terms from Neighborhoods
BP GO:1901989 positive regulation of cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901992 positive regulation of mitotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902101 positive regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902850 microtubule cytoskeleton organization involved in mitosis IEP Predict GO terms from Neighborhoods
BP GO:1902930 regulation of alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1905818 regulation of chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1905819 negative regulation of chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1905820 positive regulation of chromosome separation IEP Predict GO terms from Neighborhoods
CC GO:1990023 mitotic spindle midzone IEP Predict GO terms from Neighborhoods
BP GO:1990074 polyuridylation-dependent mRNA catabolic process IEP Predict GO terms from Neighborhoods
CC GO:1990752 microtubule end IEP Predict GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP Predict GO terms from Neighborhoods
BP GO:2001251 negative regulation of chromosome organization IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001258 NHL_repeat 288 315
No external refs found!