SOLTUB.AGRIA.G00000031704

Description : Cyclin family protein

Gene families : OG_02_0010471 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000031704
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_159

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEA	AHRD
CC	GO:0000307	cyclin-dependent protein kinase holoenzyme complex	IEA	AHRD
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
BP	GO:0005979	regulation of glycogen biosynthetic process	IEA	AHRD
BP	GO:0005981	regulation of glycogen catabolic process	IEA	AHRD
BP	GO:0006109	regulation of carbohydrate metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009894	regulation of catabolic process	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	None	Extended
BP	GO:0010962	regulation of glucan biosynthetic process	None	Extended
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEA	AHRD
MF	GO:0019207	kinase regulator activity	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019887	protein kinase regulator activity	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	IEA	AHRD
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031329	regulation of cellular catabolic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0032881	regulation of polysaccharide metabolic process	None	Extended
BP	GO:0032885	regulation of polysaccharide biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0042325	regulation of phosphorylation	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043255	regulation of carbohydrate biosynthetic process	None	Extended
BP	GO:0043467	regulation of generation of precursor metabolites and energy	None	Extended
BP	GO:0043470	regulation of carbohydrate catabolic process	None	Extended
BP	GO:0043471	regulation of cellular carbohydrate catabolic process	None	Extended
BP	GO:0043549	regulation of kinase activity	None	Extended
BP	GO:0045859	regulation of protein kinase activity	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051338	regulation of transferase activity	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	IEA	AHRD
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0070873	regulation of glycogen metabolic process	None	Extended
BP	GO:0071900	regulation of protein serine/threonine kinase activity	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1902554	serine/threonine protein kinase complex	None	Extended
CC	GO:1902911	protein kinase complex	None	Extended
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	None	Extended
CC	GO:1990234	transferase complex	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000209	protein polyubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0000266	mitochondrial fission	IEP	Predict GO terms from Neighborhoods
BP	GO:0000919	cell plate assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0001654	eye development	IEP	Predict GO terms from Neighborhoods
MF	GO:0003924	GTPase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005525	GTP binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005737	cytoplasm	IEP	Predict GO terms from Neighborhoods
CC	GO:0005874	microtubule	IEP	Predict GO terms from Neighborhoods
CC	GO:0005886	plasma membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0005938	cell cortex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006275	regulation of DNA replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006886	intracellular protein transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006897	endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006898	receptor-mediated endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006914	autophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0006996	organelle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007005	mitochondrion organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007423	sensory organ development	IEP	Predict GO terms from Neighborhoods
MF	GO:0008017	microtubule binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008092	cytoskeletal protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0008156	negative regulation of DNA replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0008285	negative regulation of cell population proliferation	IEP	Predict GO terms from Neighborhoods
CC	GO:0009504	cell plate	IEP	Predict GO terms from Neighborhoods
CC	GO:0009524	phragmoplast	IEP	Predict GO terms from Neighborhoods
CC	GO:0009535	chloroplast thylakoid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0009636	response to toxic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0009920	cell plate formation involved in plant-type cell wall biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010029	regulation of seed germination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010036	response to boron-containing substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0010051	xylem and phloem pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010091	trichome branching	IEP	Predict GO terms from Neighborhoods
BP	GO:0010152	pollen maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010187	negative regulation of seed germination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010498	proteasomal protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010942	positive regulation of cell death	IEP	Predict GO terms from Neighborhoods
MF	GO:0015631	tubulin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0016043	cellular component organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0016462	pyrophosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Predict GO terms from Neighborhoods
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Predict GO terms from Neighborhoods
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019001	guanyl nucleotide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019900	kinase binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019901	protein kinase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0021700	developmental maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0030100	regulation of endocytosis	IEP	Predict GO terms from Neighborhoods
CC	GO:0030135	coated vesicle	IEP	Predict GO terms from Neighborhoods
CC	GO:0030136	clathrin-coated vesicle	IEP	Predict GO terms from Neighborhoods
CC	GO:0030139	endocytic vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0030163	protein catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0030276	clathrin binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031261	DNA replication preinitiation complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0031396	regulation of protein ubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0031397	negative regulation of protein ubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0031400	negative regulation of protein modification process	IEP	Predict GO terms from Neighborhoods
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0031463	Cul3-RING ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0031669	cellular response to nutrient levels	IEP	Predict GO terms from Neighborhoods
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032878	regulation of establishment or maintenance of cell polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032886	regulation of microtubule-based process	IEP	Predict GO terms from Neighborhoods
CC	GO:0032993	protein-DNA complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0034357	photosynthetic membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0042170	plastid membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0042651	thylakoid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0042981	regulation of apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043065	positive regulation of apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043068	positive regulation of programmed cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0043424	protein histidine kinase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0045334	clathrin-coated endocytic vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0048285	organelle fission	IEP	Predict GO terms from Neighborhoods
BP	GO:0048480	stigma development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048581	negative regulation of post-embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048766	root hair initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051052	regulation of DNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051053	negative regulation of DNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051716	cellular response to stimulus	IEP	Predict GO terms from Neighborhoods
CC	GO:0055035	plastid thylakoid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0060627	regulation of vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0061919	process utilizing autophagic mechanism	IEP	Predict GO terms from Neighborhoods
BP	GO:0070507	regulation of microtubule cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0070887	cellular response to chemical stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071840	cellular component organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0072583	clathrin-dependent endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0080029	cellular response to boron-containing substance levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0080135	regulation of cellular response to stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0080157	regulation of plant-type cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0090329	regulation of DNA-templated DNA replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0097237	cellular response to toxic substance	IEP	Predict GO terms from Neighborhoods
CC	GO:0099081	supramolecular polymer	IEP	Predict GO terms from Neighborhoods
CC	GO:0099512	supramolecular fiber	IEP	Predict GO terms from Neighborhoods
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	Predict GO terms from Neighborhoods
BP	GO:1900140	regulation of seedling development	IEP	Predict GO terms from Neighborhoods
BP	GO:1902533	positive regulation of intracellular signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:1903047	mitotic cell cycle process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903320	regulation of protein modification by small protein conjugation or removal	IEP	Predict GO terms from Neighborhoods
BP	GO:1903321	negative regulation of protein modification by small protein conjugation or removal	IEP	Predict GO terms from Neighborhoods
BP	GO:1903338	regulation of cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1905952	regulation of lipid localization	IEP	Predict GO terms from Neighborhoods
BP	GO:2000104	negative regulation of DNA-templated DNA replication	IEP	Predict GO terms from Neighborhoods
BP	GO:2000114	regulation of establishment of cell polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:2000694	regulation of phragmoplast microtubule organization	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR013922	Cyclin_PHO80-like	55	167
IPR036915	Cyclin-like_sf	79	168

External Links

No external refs found!

SOLTUB.AGRIA.G00000031704

Expression Profile

Co-expression Networks

Functional Annotation