SOLTUB.AGRIA.G00000032057


Description : Peptide chain release factor 1


Gene families : OG_02_0016576 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000032057
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_27


Type GO Term Name Evidence Source
BP GO:0006415 translational termination IEA AHRD
CC GO:0009507 chloroplast IEA AHRD
BP GO:0009658 chloroplast organization IEA AHRD
BP GO:0010027 thylakoid membrane organization IEA AHRD
MF GO:0016149 translation release factor activity, codon specific IEA AHRD
BP GO:0032544 plastid translation IEA AHRD
BP GO:0040008 regulation of growth IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000086 G2/M transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0000096 sulfur amino acid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0000963 mitochondrial RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0001887 selenium compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0002097 tRNA wobble base modification IEP Predict GO terms from Neighborhoods
BP GO:0002098 tRNA wobble uridine modification IEP Predict GO terms from Neighborhoods
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predict GO terms from Neighborhoods
BP GO:0003014 renal system process IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Predict GO terms from Neighborhoods
MF GO:0004177 aminopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0004816 asparagine-tRNA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0004817 cysteine-tRNA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0004822 isoleucine-tRNA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0004832 valine-tRNA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0005047 signal recognition particle binding IEP Predict GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Predict GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Predict GO terms from Neighborhoods
CC GO:0005739 mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006352 DNA-templated transcription initiation IEP Predict GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006417 regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predict GO terms from Neighborhoods
BP GO:0006421 asparaginyl-tRNA aminoacylation IEP Predict GO terms from Neighborhoods
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Predict GO terms from Neighborhoods
BP GO:0006428 isoleucyl-tRNA aminoacylation IEP Predict GO terms from Neighborhoods
BP GO:0006431 methionyl-tRNA aminoacylation IEP Predict GO terms from Neighborhoods
BP GO:0006438 valyl-tRNA aminoacylation IEP Predict GO terms from Neighborhoods
BP GO:0006450 regulation of translational fidelity IEP Predict GO terms from Neighborhoods
BP GO:0006520 cellular amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006534 cysteine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006613 cotranslational protein targeting to membrane IEP Predict GO terms from Neighborhoods
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predict GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006775 fat-soluble vitamin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007007 inner mitochondrial membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0007588 excretion IEP Predict GO terms from Neighborhoods
MF GO:0008235 metalloexopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0008354 germ cell migration IEP Predict GO terms from Neighborhoods
MF GO:0008525 phosphatidylcholine transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0008728 GTP diphosphokinase activity IEP Predict GO terms from Neighborhoods
MF GO:0008893 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0009000 selenocysteine lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0009271 phage shock IEP Predict GO terms from Neighborhoods
CC GO:0009295 nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0009368 endopeptidase Clp complex IEP Predict GO terms from Neighborhoods
BP GO:0009399 nitrogen fixation IEP Predict GO terms from Neighborhoods
BP GO:0009410 response to xenobiotic stimulus IEP Predict GO terms from Neighborhoods
CC GO:0009508 plastid chromosome IEP Predict GO terms from Neighborhoods
CC GO:0009528 plastid inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0009532 plastid stroma IEP Predict GO terms from Neighborhoods
CC GO:0009570 chloroplast stroma IEP Predict GO terms from Neighborhoods
BP GO:0009663 plasmodesma organization IEP Predict GO terms from Neighborhoods
CC GO:0009706 chloroplast inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0009840 chloroplastic endopeptidase Clp complex IEP Predict GO terms from Neighborhoods
BP GO:0010114 response to red light IEP Predict GO terms from Neighborhoods
BP GO:0010239 chloroplast mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0010269 response to selenium ion IEP Predict GO terms from Neighborhoods
BP GO:0010343 singlet oxygen-mediated programmed cell death IEP Predict GO terms from Neighborhoods
BP GO:0010467 gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010608 post-transcriptional regulation of gene expression IEP Predict GO terms from Neighborhoods
MF GO:0015440 ABC-type peptide transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015949 nucleobase-containing small molecule interconversion IEP Predict GO terms from Neighborhoods
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016151 nickel cation binding IEP Predict GO terms from Neighborhoods
BP GO:0016226 iron-sulfur cluster assembly IEP Predict GO terms from Neighborhoods
MF GO:0016778 diphosphotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016783 sulfurtransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predict GO terms from Neighborhoods
MF GO:0016794 diphosphoric monoester hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predict GO terms from Neighborhoods
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0016987 sigma factor activity IEP Predict GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0017085 response to insecticide IEP Predict GO terms from Neighborhoods
BP GO:0018206 peptidyl-methionine modification IEP Predict GO terms from Neighborhoods
BP GO:0018282 metal incorporation into metallo-sulfur cluster IEP Predict GO terms from Neighborhoods
BP GO:0018283 iron incorporation into metallo-sulfur cluster IEP Predict GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0019866 organelle inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0019897 extrinsic component of plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0019898 extrinsic component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0030488 tRNA methylation IEP Predict GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0031071 cysteine desulfurase activity IEP Predict GO terms from Neighborhoods
BP GO:0031154 culmination involved in sorocarp development IEP Predict GO terms from Neighborhoods
BP GO:0031163 metallo-sulfur cluster assembly IEP Predict GO terms from Neighborhoods
CC GO:0031234 extrinsic component of cytoplasmic side of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0031288 sorocarp morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0031365 N-terminal protein amino acid modification IEP Predict GO terms from Neighborhoods
BP GO:0031425 chloroplast RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0031426 polycistronic mRNA processing IEP Predict GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Predict GO terms from Neighborhoods
CC GO:0031969 chloroplast membrane IEP Predict GO terms from Neighborhoods
BP GO:0032370 positive regulation of lipid transport IEP Predict GO terms from Neighborhoods
BP GO:0032543 mitochondrial translation IEP Predict GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0032782 bile acid secretion IEP Predict GO terms from Neighborhoods
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034204 lipid translocation IEP Predict GO terms from Neighborhoods
BP GO:0034248 regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0034357 photosynthetic membrane IEP Predict GO terms from Neighborhoods
BP GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic IEP Predict GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0034702 ion channel complex IEP Predict GO terms from Neighborhoods
CC GO:0034703 cation channel complex IEP Predict GO terms from Neighborhoods
CC GO:0034705 potassium channel complex IEP Predict GO terms from Neighborhoods
BP GO:0035551 protein initiator methionine removal involved in protein maturation IEP Predict GO terms from Neighborhoods
BP GO:0035627 ceramide transport IEP Predict GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predict GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Predict GO terms from Neighborhoods
BP GO:0036473 cell death in response to oxidative stress IEP Predict GO terms from Neighborhoods
CC GO:0042170 plastid membrane IEP Predict GO terms from Neighborhoods
BP GO:0042362 fat-soluble vitamin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042371 vitamin K biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042372 phylloquinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042373 vitamin K metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042374 phylloquinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042407 cristae formation IEP Predict GO terms from Neighborhoods
CC GO:0042644 chloroplast nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0042646 plastid nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0042651 thylakoid membrane IEP Predict GO terms from Neighborhoods
BP GO:0042779 tRNA 3'-trailer cleavage IEP Predict GO terms from Neighborhoods
MF GO:0042781 3'-tRNA processing endoribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Predict GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Predict GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Predict GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Predict GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Predict GO terms from Neighborhoods
MF GO:0043175 RNA polymerase core enzyme binding IEP Predict GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044839 cell cycle G2/M phase transition IEP Predict GO terms from Neighborhoods
BP GO:0045047 protein targeting to ER IEP Predict GO terms from Neighborhoods
BP GO:0045216 cell-cell junction organization IEP Predict GO terms from Neighborhoods
BP GO:0045332 phospholipid translocation IEP Predict GO terms from Neighborhoods
BP GO:0045472 response to ether IEP Predict GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0046581 intercellular canaliculus IEP Predict GO terms from Neighborhoods
MF GO:0046623 sphingolipid floppase activity IEP Predict GO terms from Neighborhoods
MF GO:0046624 sphingolipid transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0046717 acid secretion IEP Predict GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Predict GO terms from Neighborhoods
BP GO:0048481 plant ovule development IEP Predict GO terms from Neighborhoods
BP GO:0048564 photosystem I assembly IEP Predict GO terms from Neighborhoods
BP GO:0051604 protein maturation IEP Predict GO terms from Neighborhoods
CC GO:0062157 mitochondrial ATP-gated potassium channel complex IEP Predict GO terms from Neighborhoods
MF GO:0070006 metalloaminopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0070084 protein initiator methionine removal IEP Predict GO terms from Neighborhoods
BP GO:0070633 transepithelial transport IEP Predict GO terms from Neighborhoods
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0071478 cellular response to radiation IEP Predict GO terms from Neighborhoods
BP GO:0071482 cellular response to light stimulus IEP Predict GO terms from Neighborhoods
BP GO:0072089 stem cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090351 seedling development IEP Predict GO terms from Neighborhoods
MF GO:0090554 phosphatidylcholine floppase activity IEP Predict GO terms from Neighborhoods
MF GO:0090555 phosphatidylethanolamine flippase activity IEP Predict GO terms from Neighborhoods
BP GO:0097035 regulation of membrane lipid distribution IEP Predict GO terms from Neighborhoods
BP GO:0097254 renal tubular secretion IEP Predict GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Predict GO terms from Neighborhoods
BP GO:0097428 protein maturation by iron-sulfur cluster transfer IEP Predict GO terms from Neighborhoods
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP Predict GO terms from Neighborhoods
BP GO:0098586 cellular response to virus IEP Predict GO terms from Neighborhoods
MF GO:0099038 ceramide floppase activity IEP Predict GO terms from Neighborhoods
BP GO:0099039 sphingolipid translocation IEP Predict GO terms from Neighborhoods
BP GO:0099040 ceramide translocation IEP Predict GO terms from Neighborhoods
BP GO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity IEP Predict GO terms from Neighborhoods
BP GO:0140053 mitochondrial gene expression IEP Predict GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Predict GO terms from Neighborhoods
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predict GO terms from Neighborhoods
MF GO:0140326 ATPase-coupled intramembrane lipid transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0140327 flippase activity IEP Predict GO terms from Neighborhoods
MF GO:0140328 floppase activity IEP Predict GO terms from Neighborhoods
MF GO:0140333 glycerophospholipid flippase activity IEP Predict GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Predict GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Predict GO terms from Neighborhoods
BP GO:0150104 transport across blood-brain barrier IEP Predict GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Predict GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901529 positive regulation of anion channel activity IEP Predict GO terms from Neighborhoods
BP GO:1901557 response to fenofibrate IEP Predict GO terms from Neighborhoods
BP GO:1901661 quinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901663 quinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903793 positive regulation of anion transport IEP Predict GO terms from Neighborhoods
BP GO:1903961 positive regulation of anion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1904821 chloroplast disassembly IEP Predict GO terms from Neighborhoods
BP GO:1905267 endonucleolytic cleavage involved in tRNA processing IEP Predict GO terms from Neighborhoods
BP GO:1990962 xenobiotic transport across blood-brain barrier IEP Predict GO terms from Neighborhoods
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2001225 regulation of chloride transport IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000352 Pep_chain_release_fac_I 269 378
IPR005139 PCRF 67 261
IPR004373 RF-1 55 414
No external refs found!