SOLTUB.AGRIA.G00000032157


Description : Protein COBRA, putative


Gene families : OG_02_0016597 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000032157
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_52


Type GO Term Name Evidence Source
CC GO:0005768 endosome IEA AHRD
CC GO:0005802 trans-Golgi network IEA AHRD
CC GO:0009506 plasmodesma IEA AHRD
BP GO:0009664 plant-type cell wall organization IEA AHRD
BP GO:0009832 plant-type cell wall biogenesis IEA AHRD
BP GO:0009860 pollen tube growth IEA AHRD
BP GO:0010183 pollen tube guidance IEA AHRD
CC GO:0016324 apical plasma membrane IEA AHRD
CC GO:0046658 anchored component of plasma membrane IEA AHRD
BP GO:0048765 root hair cell differentiation IEA AHRD
CC GO:0090406 pollen tube IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP Predict GO terms from Neighborhoods
BP GO:0000272 polysaccharide catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0000325 plant-type vacuole IEP Predict GO terms from Neighborhoods
BP GO:0001666 response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0001935 endothelial cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0002215 defense response to nematode IEP Predict GO terms from Neighborhoods
BP GO:0002376 immune system process IEP Predict GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004604 phosphoadenylyl-sulfate reductase (thioredoxin) activity IEP Predict GO terms from Neighborhoods
MF GO:0004620 phospholipase activity IEP Predict GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004674 protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004675 transmembrane receptor protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004683 calmodulin-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004888 transmembrane signaling receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0005488 binding IEP Predict GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Predict GO terms from Neighborhoods
CC GO:0005773 vacuole IEP Predict GO terms from Neighborhoods
CC GO:0005794 Golgi apparatus IEP Predict GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Predict GO terms from Neighborhoods
BP GO:0006952 defense response IEP Predict GO terms from Neighborhoods
BP GO:0006955 immune response IEP Predict GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0008219 cell death IEP Predict GO terms from Neighborhoods
MF GO:0009044 xylan 1,4-beta-xylosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0009505 plant-type cell wall IEP Predict GO terms from Neighborhoods
BP GO:0009555 pollen development IEP Predict GO terms from Neighborhoods
BP GO:0009593 detection of chemical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009605 response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009607 response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009615 response to virus IEP Predict GO terms from Neighborhoods
BP GO:0009626 plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
BP GO:0009737 response to abscisic acid IEP Predict GO terms from Neighborhoods
BP GO:0009791 post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0009827 plant-type cell wall modification IEP Predict GO terms from Neighborhoods
BP GO:0009888 tissue development IEP Predict GO terms from Neighborhoods
BP GO:0009891 positive regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009893 positive regulation of metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0009973 adenylyl-sulfate reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0010018 far-red light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010087 phloem or xylem histogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010089 xylem development IEP Predict GO terms from Neighborhoods
BP GO:0010119 regulation of stomatal movement IEP Predict GO terms from Neighborhoods
BP GO:0010158 abaxial cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEP Predict GO terms from Neighborhoods
BP GO:0010271 regulation of chlorophyll catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010311 lateral root formation IEP Predict GO terms from Neighborhoods
BP GO:0010345 suberin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010359 regulation of anion channel activity IEP Predict GO terms from Neighborhoods
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP Predict GO terms from Neighborhoods
BP GO:0010929 positive regulation of auxin mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0012501 programmed cell death IEP Predict GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Predict GO terms from Neighborhoods
MF GO:0016298 lipase activity IEP Predict GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predict GO terms from Neighborhoods
BP GO:0016998 cell wall macromolecule catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019199 transmembrane receptor protein kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0019379 sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) IEP Predict GO terms from Neighborhoods
BP GO:0019419 sulfate reduction IEP Predict GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0020037 heme binding IEP Predict GO terms from Neighborhoods
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0022604 regulation of cell morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0030145 manganese ion binding IEP Predict GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Predict GO terms from Neighborhoods
CC GO:0031012 extracellular matrix IEP Predict GO terms from Neighborhoods
BP GO:0031325 positive regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031407 oxylipin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031408 oxylipin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0032504 multicellular organism reproduction IEP Predict GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Predict GO terms from Neighborhoods
MF GO:0033741 adenylyl-sulfate reductase (glutathione) activity IEP Predict GO terms from Neighborhoods
BP GO:0034050 programmed cell death induced by symbiont IEP Predict GO terms from Neighborhoods
BP GO:0036293 response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0036294 cellular response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0040008 regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0042545 cell wall modification IEP Predict GO terms from Neighborhoods
BP GO:0042743 hydrogen peroxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042744 hydrogen peroxide catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Predict GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Predict GO terms from Neighborhoods
BP GO:0043207 response to external biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0043370 regulation of CD4-positive, alpha-beta T cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0043372 positive regulation of CD4-positive, alpha-beta T cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043455 regulation of secondary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044036 cell wall macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044070 regulation of anion transport IEP Predict GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044265 cellular macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044347 cell wall polysaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044403 biological process involved in symbiotic interaction IEP Predict GO terms from Neighborhoods
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Predict GO terms from Neighborhoods
BP GO:0045087 innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0045580 regulation of T cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045582 positive regulation of T cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045621 positive regulation of lymphocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045622 regulation of T-helper cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045624 positive regulation of T-helper cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045926 negative regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046634 regulation of alpha-beta T cell activation IEP Predict GO terms from Neighborhoods
BP GO:0046635 positive regulation of alpha-beta T cell activation IEP Predict GO terms from Neighborhoods
BP GO:0046637 regulation of alpha-beta T cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0046638 positive regulation of alpha-beta T cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0046686 response to cadmium ion IEP Predict GO terms from Neighborhoods
BP GO:0046777 protein autophosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Predict GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Predict GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Predict GO terms from Neighborhoods
MF GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0047372 acylglycerol lipase activity IEP Predict GO terms from Neighborhoods
BP GO:0047484 regulation of response to osmotic stress IEP Predict GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Predict GO terms from Neighborhoods
BP GO:0048229 gametophyte development IEP Predict GO terms from Neighborhoods
BP GO:0048364 root development IEP Predict GO terms from Neighborhoods
BP GO:0048522 positive regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0048527 lateral root development IEP Predict GO terms from Neighborhoods
BP GO:0048528 post-embryonic root development IEP Predict GO terms from Neighborhoods
BP GO:0048536 spleen development IEP Predict GO terms from Neighborhoods
BP GO:0048538 thymus development IEP Predict GO terms from Neighborhoods
BP GO:0048566 embryonic digestive tract development IEP Predict GO terms from Neighborhoods
BP GO:0048609 multicellular organismal reproductive process IEP Predict GO terms from Neighborhoods
BP GO:0048638 regulation of developmental growth IEP Predict GO terms from Neighborhoods
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048658 anther wall tapetum development IEP Predict GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Predict GO terms from Neighborhoods
BP GO:0048859 formation of anatomical boundary IEP Predict GO terms from Neighborhoods
BP GO:0050673 epithelial cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0051510 regulation of unidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0051606 detection of stimulus IEP Predict GO terms from Neighborhoods
BP GO:0051607 defense response to virus IEP Predict GO terms from Neighborhoods
BP GO:0051702 biological process involved in interaction with symbiont IEP Predict GO terms from Neighborhoods
BP GO:0051707 response to other organism IEP Predict GO terms from Neighborhoods
BP GO:0051782 negative regulation of cell division IEP Predict GO terms from Neighborhoods
MF GO:0052689 carboxylic ester hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0070482 response to oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0070726 cell wall assembly IEP Predict GO terms from Neighborhoods
BP GO:0070741 response to interleukin-6 IEP Predict GO terms from Neighborhoods
BP GO:0070887 cellular response to chemical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071354 cellular response to interleukin-6 IEP Predict GO terms from Neighborhoods
BP GO:0071453 cellular response to oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0071456 cellular response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0071490 cellular response to far red light IEP Predict GO terms from Neighborhoods
BP GO:0071588 hydrogen peroxide mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0071668 plant-type cell wall assembly IEP Predict GO terms from Neighborhoods
BP GO:0072593 reactive oxygen species metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080001 mucilage extrusion from seed coat IEP Predict GO terms from Neighborhoods
BP GO:0080060 integument development IEP Predict GO terms from Neighborhoods
BP GO:0080092 regulation of pollen tube growth IEP Predict GO terms from Neighborhoods
MF GO:0080133 midchain alkane hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0090398 cellular senescence IEP Predict GO terms from Neighborhoods
BP GO:0090400 stress-induced premature senescence IEP Predict GO terms from Neighborhoods
BP GO:0090691 formation of plant organ boundary IEP Predict GO terms from Neighborhoods
BP GO:0090696 post-embryonic plant organ development IEP Predict GO terms from Neighborhoods
BP GO:0090709 regulation of timing of plant organ formation IEP Predict GO terms from Neighborhoods
BP GO:0097305 response to alcohol IEP Predict GO terms from Neighborhoods
MF GO:0097599 xylanase activity IEP Predict GO terms from Neighborhoods
BP GO:0098542 defense response to other organism IEP Predict GO terms from Neighborhoods
BP GO:0098754 detoxification IEP Predict GO terms from Neighborhoods
BP GO:0098869 cellular oxidant detoxification IEP Predict GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Predict GO terms from Neighborhoods
BP GO:0140546 defense response to symbiont IEP Predict GO terms from Neighborhoods
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1900378 positive regulation of secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901000 regulation of response to salt stress IEP Predict GO terms from Neighborhoods
BP GO:1901002 positive regulation of response to salt stress IEP Predict GO terms from Neighborhoods
BP GO:1901141 regulation of lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901181 negative regulation of cellular response to caffeine IEP Predict GO terms from Neighborhoods
BP GO:1901347 negative regulation of secondary cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:1901348 positive regulation of secondary cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:1901404 regulation of tetrapyrrole catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901406 positive regulation of tetrapyrrole catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901428 regulation of syringal lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901430 positive regulation of syringal lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901528 hydrogen peroxide mediated signaling pathway involved in stomatal movement IEP Predict GO terms from Neighborhoods
BP GO:1901533 negative regulation of hematopoietic progenitor cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901979 regulation of inward rectifier potassium channel activity IEP Predict GO terms from Neighborhoods
BP GO:1902074 response to salt IEP Predict GO terms from Neighborhoods
BP GO:1902584 positive regulation of response to water deprivation IEP Predict GO terms from Neighborhoods
BP GO:1903339 negative regulation of cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:1903340 positive regulation of cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:1903648 positive regulation of chlorophyll catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903959 regulation of anion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1904248 regulation of age-related resistance IEP Predict GO terms from Neighborhoods
BP GO:1904250 positive regulation of age-related resistance IEP Predict GO terms from Neighborhoods
BP GO:1904961 quiescent center organization IEP Predict GO terms from Neighborhoods
BP GO:1905393 plant organ formation IEP Predict GO terms from Neighborhoods
BP GO:1990748 cellular detoxification IEP Predict GO terms from Neighborhoods
BP GO:2000514 regulation of CD4-positive, alpha-beta T cell activation IEP Predict GO terms from Neighborhoods
BP GO:2000516 positive regulation of CD4-positive, alpha-beta T cell activation IEP Predict GO terms from Neighborhoods
BP GO:2000652 regulation of secondary cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:2000762 regulation of phenylpropanoid metabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006918 COBRA_pln 211 390
No external refs found!