Coexpression cluster: Cluster_52 (HCCA Clusters (HRR 50 & PCC 0.5))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0010345 suberin biosynthetic process 10.99% (21/191) 4.38 0.0 0.0
GO:0010025 wax biosynthetic process 7.85% (15/191) 4.65 0.0 0.0
GO:0009699 phenylpropanoid biosynthetic process 16.23% (31/191) 2.73 0.0 0.0
GO:0010166 wax metabolic process 7.85% (15/191) 4.53 0.0 0.0
GO:1901570 fatty acid derivative biosynthetic process 7.85% (15/191) 4.44 0.0 0.0
GO:0009698 phenylpropanoid metabolic process 16.75% (32/191) 2.56 0.0 0.0
GO:0044550 secondary metabolite biosynthetic process 18.32% (35/191) 2.33 0.0 0.0
GO:0000038 very long-chain fatty acid metabolic process 6.81% (13/191) 4.65 0.0 0.0
GO:1901568 fatty acid derivative metabolic process 8.38% (16/191) 3.94 0.0 0.0
GO:0042761 very long-chain fatty acid biosynthetic process 6.28% (12/191) 4.87 0.0 0.0
GO:0019748 secondary metabolic process 19.37% (37/191) 1.99 0.0 0.0
GO:0046394 carboxylic acid biosynthetic process 14.66% (28/191) 2.34 0.0 0.0
GO:0016053 organic acid biosynthetic process 15.18% (29/191) 2.25 0.0 0.0
GO:0048226 Casparian strip 6.28% (12/191) 4.08 0.0 0.0
GO:1901141 regulation of lignin biosynthetic process 6.81% (13/191) 3.84 0.0 0.0
GO:0071669 plant-type cell wall organization or biogenesis 12.04% (23/191) 2.54 0.0 0.0
GO:0044347 cell wall polysaccharide catabolic process 4.71% (9/191) 4.89 0.0 0.0
GO:0044036 cell wall macromolecule metabolic process 8.9% (17/191) 3.03 0.0 0.0
GO:0006629 lipid metabolic process 22.51% (43/191) 1.58 0.0 0.0
GO:2000762 regulation of phenylpropanoid metabolic process 7.85% (15/191) 3.23 0.0 0.0
GO:1901362 organic cyclic compound biosynthetic process 21.47% (41/191) 1.6 0.0 0.0
GO:0044249 cellular biosynthetic process 31.94% (61/191) 1.19 0.0 0.0
GO:1901576 organic substance biosynthetic process 32.98% (63/191) 1.15 0.0 0.0
GO:0044283 small molecule biosynthetic process 15.71% (30/191) 1.94 0.0 0.0
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups 9.95% (19/191) 2.63 0.0 0.0
GO:0006631 fatty acid metabolic process 10.99% (21/191) 2.43 0.0 0.0
GO:0032787 monocarboxylic acid metabolic process 15.18% (29/191) 1.94 0.0 0.0
GO:1901428 regulation of syringal lignin biosynthetic process 4.19% (8/191) 4.75 0.0 0.0
GO:1901430 positive regulation of syringal lignin biosynthetic process 4.19% (8/191) 4.75 0.0 0.0
GO:0009058 biosynthetic process 33.51% (64/191) 1.1 0.0 0.0
GO:0071554 cell wall organization or biogenesis 14.66% (28/191) 1.96 0.0 0.0
GO:0045229 external encapsulating structure organization 14.14% (27/191) 2.0 0.0 0.0
GO:0016998 cell wall macromolecule catabolic process 4.71% (9/191) 4.26 0.0 0.0
GO:0019752 carboxylic acid metabolic process 18.32% (35/191) 1.66 0.0 0.0
GO:0016746 acyltransferase activity 9.95% (19/191) 2.5 0.0 0.0
GO:0072330 monocarboxylic acid biosynthetic process 9.95% (19/191) 2.49 0.0 0.0
GO:0048046 apoplast 11.52% (22/191) 2.22 0.0 0.0
GO:0004312 fatty acid synthase activity 4.19% (8/191) 4.45 0.0 0.0
GO:1900376 regulation of secondary metabolite biosynthetic process 7.33% (14/191) 2.96 0.0 0.0
GO:0006082 organic acid metabolic process 19.9% (38/191) 1.47 0.0 0.0
GO:0006633 fatty acid biosynthetic process 6.81% (13/191) 2.96 0.0 1e-06
GO:1900378 positive regulation of secondary metabolite biosynthetic process 4.19% (8/191) 4.17 0.0 1e-06
GO:0019438 aromatic compound biosynthetic process 17.28% (33/191) 1.56 0.0 1e-06
GO:0043436 oxoacid metabolic process 18.85% (36/191) 1.47 0.0 1e-06
GO:0005618 cell wall 15.18% (29/191) 1.7 0.0 1e-06
GO:0009664 plant-type cell wall organization 7.85% (15/191) 2.63 0.0 1e-06
GO:0043455 regulation of secondary metabolic process 8.38% (16/191) 2.47 0.0 2e-06
GO:0009827 plant-type cell wall modification 6.28% (12/191) 2.94 0.0 3e-06
GO:0030312 external encapsulating structure 15.18% (29/191) 1.62 0.0 3e-06
GO:0008610 lipid biosynthetic process 14.66% (28/191) 1.65 0.0 3e-06
GO:0080001 mucilage extrusion from seed coat 4.71% (9/191) 3.54 0.0 3e-06
GO:0004601 peroxidase activity 5.24% (10/191) 3.24 0.0 5e-06
GO:0052716 hydroquinone:oxygen oxidoreductase activity 2.62% (5/191) 5.3 0.0 5e-06
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor 5.24% (10/191) 3.19 0.0 6e-06
GO:0046274 lignin catabolic process 2.62% (5/191) 5.24 0.0 6e-06
GO:0009834 plant-type secondary cell wall biogenesis 5.24% (10/191) 3.16 0.0 7e-06
GO:0009832 plant-type cell wall biogenesis 6.28% (12/191) 2.77 0.0 8e-06
GO:0010089 xylem development 5.76% (11/191) 2.93 0.0 8e-06
GO:0048658 anther wall tapetum development 4.19% (8/191) 3.64 0.0 9e-06
GO:0005789 endoplasmic reticulum membrane 10.47% (20/191) 1.94 0.0 1e-05
GO:0035336 long-chain fatty-acyl-CoA metabolic process 3.14% (6/191) 4.43 0.0 1.1e-05
GO:0102336 3-oxo-arachidoyl-CoA synthase activity 2.09% (4/191) 5.87 1e-06 1.5e-05
GO:0102337 3-oxo-cerotoyl-CoA synthase activity 2.09% (4/191) 5.87 1e-06 1.5e-05
GO:0102338 3-oxo-lignoceronyl-CoA synthase activity 2.09% (4/191) 5.87 1e-06 1.5e-05
GO:0102756 very-long-chain 3-ketoacyl-CoA synthase activity 2.09% (4/191) 5.87 1e-06 1.5e-05
GO:0005976 polysaccharide metabolic process 9.42% (18/191) 2.02 1e-06 1.7e-05
GO:1901575 organic substance catabolic process 18.32% (35/191) 1.3 1e-06 1.7e-05
GO:0044255 cellular lipid metabolic process 16.23% (31/191) 1.4 1e-06 1.9e-05
GO:0080133 midchain alkane hydroxylase activity 2.09% (4/191) 5.77 1e-06 1.9e-05
GO:0016209 antioxidant activity 5.24% (10/191) 2.96 1e-06 2e-05
GO:1901002 positive regulation of response to salt stress 4.71% (9/191) 3.17 1e-06 2.1e-05
GO:0035337 fatty-acyl-CoA metabolic process 3.14% (6/191) 4.2 1e-06 2.5e-05
GO:0018685 alkane 1-monooxygenase activity 2.62% (5/191) 4.79 1e-06 2.5e-05
GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor 3.14% (6/191) 4.15 1e-06 2.9e-05
GO:0046271 phenylpropanoid catabolic process 2.62% (5/191) 4.71 1e-06 3.2e-05
GO:0032502 developmental process 42.93% (82/191) 0.67 1e-06 3.5e-05
GO:0042545 cell wall modification 7.33% (14/191) 2.28 1e-06 3.5e-05
GO:0048856 anatomical structure development 34.55% (66/191) 0.79 2e-06 3.8e-05
GO:0071555 cell wall organization 9.95% (19/191) 1.84 2e-06 4e-05
GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen 2.62% (5/191) 4.57 2e-06 5e-05
GO:0042546 cell wall biogenesis 6.28% (12/191) 2.44 3e-06 6.1e-05
GO:0044281 small molecule metabolic process 20.94% (40/191) 1.1 3e-06 6.8e-05
GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors 3.14% (6/191) 3.85 4e-06 8.7e-05
GO:2000652 regulation of secondary cell wall biogenesis 4.19% (8/191) 3.12 4e-06 9.5e-05
GO:0009056 catabolic process 18.85% (36/191) 1.15 5e-06 0.000104
GO:0009922 fatty acid elongase activity 2.09% (4/191) 5.09 5e-06 0.000115
GO:0000272 polysaccharide catabolic process 5.24% (10/191) 2.63 6e-06 0.000122
GO:0071456 cellular response to hypoxia 5.24% (10/191) 2.61 7e-06 0.000141
GO:0042335 cuticle development 3.14% (6/191) 3.71 7e-06 0.000146
GO:0036294 cellular response to decreased oxygen levels 5.24% (10/191) 2.57 8e-06 0.000168
GO:0009628 response to abiotic stimulus 32.46% (62/191) 0.76 8e-06 0.000169
GO:0090482 vitamin transmembrane transporter activity 2.62% (5/191) 4.17 9e-06 0.000178
GO:0005576 extracellular region 12.57% (24/191) 1.44 1e-05 0.00019
GO:0016297 acyl-[acyl-carrier-protein] hydrolase activity 2.09% (4/191) 4.87 1e-05 0.000199
GO:0010214 seed coat development 4.71% (9/191) 2.72 1.1e-05 0.000207
GO:0016491 oxidoreductase activity 15.71% (30/191) 1.23 1.1e-05 0.000217
GO:0006950 response to stress 42.41% (81/191) 0.6 1.3e-05 0.000245
GO:0051180 vitamin transport 2.62% (5/191) 4.02 1.5e-05 0.000274
GO:1901000 regulation of response to salt stress 5.24% (10/191) 2.45 1.8e-05 0.000321
GO:0071453 cellular response to oxygen levels 5.24% (10/191) 2.45 1.8e-05 0.000321
GO:0051707 response to other organism 26.7% (51/191) 0.84 1.8e-05 0.000331
GO:1901406 positive regulation of tetrapyrrole catabolic process 1.57% (3/191) 5.68 2.4e-05 0.000427
GO:1903648 positive regulation of chlorophyll catabolic process 1.57% (3/191) 5.68 2.4e-05 0.000427
GO:0009611 response to wounding 10.47% (20/191) 1.52 2.4e-05 0.000433
GO:0006952 defense response 24.61% (47/191) 0.87 2.6e-05 0.00045
GO:0098542 defense response to other organism 21.47% (41/191) 0.95 2.7e-05 0.000471
GO:0006558 L-phenylalanine metabolic process 2.62% (5/191) 3.83 2.8e-05 0.000473
GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process 2.62% (5/191) 3.83 2.8e-05 0.000473
GO:0043207 response to external biotic stimulus 27.75% (53/191) 0.79 2.8e-05 0.000474
GO:1902074 response to salt 3.66% (7/191) 3.01 2.9e-05 0.000485
GO:1903338 regulation of cell wall organization or biogenesis 4.19% (8/191) 2.73 3.1e-05 0.000506
GO:0006637 acyl-CoA metabolic process 3.66% (7/191) 2.97 3.5e-05 0.000559
GO:0035383 thioester metabolic process 3.66% (7/191) 2.97 3.5e-05 0.000559
GO:0020037 heme binding 5.24% (10/191) 2.33 3.5e-05 0.000562
GO:0005975 carbohydrate metabolic process 10.99% (21/191) 1.44 3.6e-05 0.000564
GO:0009505 plant-type cell wall 7.85% (15/191) 1.78 3.7e-05 0.000581
GO:0044419 biological process involved in interspecies interaction between organisms 26.7% (51/191) 0.79 4e-05 0.00062
GO:0009607 response to biotic stimulus 27.75% (53/191) 0.77 4.4e-05 0.000684
GO:0016052 carbohydrate catabolic process 5.76% (11/191) 2.15 4.5e-05 0.000693
GO:1901348 positive regulation of secondary cell wall biogenesis 2.09% (4/191) 4.22 6.4e-05 0.000943
GO:1903340 positive regulation of cell wall organization or biogenesis 2.09% (4/191) 4.22 6.4e-05 0.000943
GO:0033865 nucleoside bisphosphate metabolic process 3.66% (7/191) 2.83 6.3e-05 0.000946
GO:0033875 ribonucleoside bisphosphate metabolic process 3.66% (7/191) 2.83 6.3e-05 0.000946
GO:0034032 purine nucleoside bisphosphate metabolic process 3.66% (7/191) 2.83 6.3e-05 0.000946
GO:0048364 root development 8.9% (17/191) 1.58 6.5e-05 0.000948
GO:1901957 regulation of cutin biosynthetic process 2.62% (5/191) 3.51 8.3e-05 0.001197
GO:0047484 regulation of response to osmotic stress 5.24% (10/191) 2.17 8.9e-05 0.001238
GO:0090400 stress-induced premature senescence 1.57% (3/191) 5.09 8.9e-05 0.001241
GO:1904248 regulation of age-related resistance 1.57% (3/191) 5.09 8.9e-05 0.001241
GO:1904250 positive regulation of age-related resistance 1.57% (3/191) 5.09 8.9e-05 0.001241
GO:0010143 cutin biosynthetic process 2.09% (4/191) 4.09 9.1e-05 0.001241
GO:0009423 chorismate biosynthetic process 2.09% (4/191) 4.09 9.1e-05 0.001241
GO:0080022 primary root development 3.66% (7/191) 2.76 8.9e-05 0.001268
GO:0009620 response to fungus 13.09% (25/191) 1.2 9.8e-05 0.001328
GO:0002215 defense response to nematode 2.62% (5/191) 3.44 0.000102 0.001373
GO:0010208 pollen wall assembly 3.66% (7/191) 2.71 0.000108 0.001449
GO:0046417 chorismate metabolic process 2.09% (4/191) 4.0 0.000115 0.001519
GO:0003824 catalytic activity 46.07% (88/191) 0.48 0.000115 0.001522
GO:0004497 monooxygenase activity 6.81% (13/191) 1.79 0.000117 0.001534
GO:0045491 xylan metabolic process 3.14% (6/191) 2.98 0.000125 0.001616
GO:0052694 jasmonoyl-isoleucine-12-hydroxylase activity 1.57% (3/191) 4.87 0.000143 0.001845
GO:0046906 tetrapyrrole binding 5.24% (10/191) 2.07 0.000153 0.001952
GO:0010087 phloem or xylem histogenesis 6.28% (12/191) 1.84 0.000155 0.001972
GO:0010271 regulation of chlorophyll catabolic process 1.57% (3/191) 4.8 0.000165 0.00207
GO:1901404 regulation of tetrapyrrole catabolic process 1.57% (3/191) 4.8 0.000165 0.00207
GO:0044085 cellular component biogenesis 6.28% (12/191) 1.81 0.000184 0.002295
GO:0090709 regulation of timing of plant organ formation 1.57% (3/191) 4.74 0.000189 0.002323
GO:0042221 response to chemical 36.13% (69/191) 0.57 0.000189 0.002336
GO:0042744 hydrogen peroxide catabolic process 2.62% (5/191) 3.22 0.000214 0.002605
GO:0071704 organic substance metabolic process 49.74% (95/191) 0.43 0.000215 0.00261
GO:0010383 cell wall polysaccharide metabolic process 4.19% (8/191) 2.3 0.000246 0.002958
GO:0009737 response to abscisic acid 10.47% (20/191) 1.27 0.000259 0.003093
GO:0051782 negative regulation of cell division 2.09% (4/191) 3.7 0.000263 0.00312
GO:0046688 response to copper ion 2.62% (5/191) 3.14 0.000273 0.003226
GO:0006970 response to osmotic stress 12.57% (24/191) 1.12 0.00029 0.003404
GO:0009808 lignin metabolic process 4.19% (8/191) 2.26 0.0003 0.003493
GO:1990937 xylan acetylation 1.57% (3/191) 4.51 0.000308 0.003543
GO:0006723 cuticle hydrocarbon biosynthetic process 2.62% (5/191) 3.1 0.000308 0.003561
GO:0048527 lateral root development 4.19% (8/191) 2.25 0.000318 0.00361
GO:0009415 response to water 10.99% (21/191) 1.21 0.000317 0.003617
GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen 5.76% (11/191) 1.82 0.000325 0.00367
GO:0010199 organ boundary specification between lateral organs and the meristem 2.09% (4/191) 3.61 0.000333 0.003711
GO:0016298 lipase activity 3.66% (7/191) 2.45 0.000332 0.003722
GO:0070592 cell wall polysaccharide biosynthetic process 3.14% (6/191) 2.7 0.000351 0.003887
GO:0009605 response to external stimulus 30.37% (58/191) 0.61 0.000383 0.00422
GO:0047372 acylglycerol lipase activity 2.09% (4/191) 3.53 0.000416 0.004522
GO:0009809 lignin biosynthetic process 3.66% (7/191) 2.39 0.000415 0.004542
GO:0090398 cellular senescence 1.57% (3/191) 4.31 0.000467 0.005048
GO:0080167 response to karrikin 5.76% (11/191) 1.75 0.00049 0.005142
GO:0009414 response to water deprivation 10.47% (20/191) 1.2 0.000489 0.005167
GO:0035017 cuticle pattern formation 2.09% (4/191) 3.47 0.000487 0.005171
GO:0048528 post-embryonic root development 4.19% (8/191) 2.15 0.000496 0.005178
GO:0044038 cell wall macromolecule biosynthetic process 3.14% (6/191) 2.61 0.000486 0.005196
GO:0070589 cellular component macromolecule biosynthetic process 3.14% (6/191) 2.61 0.000486 0.005196
GO:0009094 L-phenylalanine biosynthetic process 1.57% (3/191) 4.26 0.000513 0.005298
GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process 1.57% (3/191) 4.26 0.000513 0.005298
GO:0015849 organic acid transport 4.71% (9/191) 1.98 0.000522 0.00536
GO:0044237 cellular metabolic process 45.55% (87/191) 0.43 0.000539 0.005503
GO:0043650 dicarboxylic acid biosynthetic process 2.09% (4/191) 3.39 0.000594 0.006032
GO:0048511 rhythmic process 5.76% (11/191) 1.71 0.000609 0.006151
GO:0016042 lipid catabolic process 4.71% (9/191) 1.94 0.000635 0.006373
GO:0001101 response to acid chemical 10.99% (21/191) 1.13 0.000673 0.006718
GO:0090696 post-embryonic plant organ development 4.19% (8/191) 2.07 0.000699 0.006906
GO:0001666 response to hypoxia 5.24% (10/191) 1.79 0.000699 0.006935
GO:0044248 cellular catabolic process 13.61% (26/191) 0.98 0.00071 0.006969
GO:0008374 O-acyltransferase activity 3.66% (7/191) 2.26 0.000725 0.007078
GO:0010927 cellular component assembly involved in morphogenesis 3.66% (7/191) 2.25 0.000739 0.007179
GO:0080091 regulation of raffinose metabolic process 2.09% (4/191) 3.3 0.000751 0.00726
GO:0010597 green leaf volatile biosynthetic process 3.14% (6/191) 2.49 0.000761 0.007282
GO:0008152 metabolic process 51.31% (98/191) 0.37 0.00076 0.007302
GO:0050896 response to stimulus 50.26% (96/191) 0.38 0.000772 0.007346
GO:0042743 hydrogen peroxide metabolic process 2.62% (5/191) 2.81 0.000782 0.007397
GO:1990538 xylan O-acetyltransferase activity 1.57% (3/191) 4.05 0.00079 0.007434
GO:0009409 response to cold 9.95% (19/191) 1.18 0.000802 0.007475
GO:0019372 lipoxygenase pathway 3.14% (6/191) 2.47 0.000798 0.007476
GO:0009072 aromatic amino acid family metabolic process 3.14% (6/191) 2.47 0.000817 0.007575
GO:0016790 thiolester hydrolase activity 2.09% (4/191) 3.27 0.000821 0.007576
GO:0031984 organelle subcompartment 7.85% (15/191) 1.36 0.000853 0.007831
GO:1901403 positive regulation of tetrapyrrole metabolic process 1.57% (3/191) 3.98 0.000922 0.008419
GO:1905428 regulation of plant organ formation 2.62% (5/191) 2.75 0.000936 0.008507
GO:0030587 sorocarp development 2.62% (5/191) 2.74 0.000964 0.008716
GO:0010035 response to inorganic substance 17.28% (33/191) 0.81 0.000987 0.008881
GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway 1.57% (3/191) 3.94 0.000993 0.008891
GO:0120255 olefinic compound biosynthetic process 3.14% (6/191) 2.41 0.001003 0.008934
GO:0010584 pollen exine formation 2.62% (5/191) 2.72 0.001022 0.009012
GO:0009800 cinnamic acid biosynthetic process 2.09% (4/191) 3.19 0.001017 0.009015
GO:0048225 suberin network 1.05% (2/191) 5.36 0.001042 0.009143
GO:0036293 response to decreased oxygen levels 5.24% (10/191) 1.71 0.001105 0.00947
GO:0048868 pollen tube development 2.09% (4/191) 3.15 0.001104 0.009505
GO:0022414 reproductive process 26.7% (51/191) 0.6 0.001101 0.009523
GO:0010410 hemicellulose metabolic process 3.14% (6/191) 2.39 0.001096 0.009524
GO:0048646 anatomical structure formation involved in morphogenesis 8.9% (17/191) 1.22 0.001092 0.009539
GO:0097305 response to alcohol 10.47% (20/191) 1.1 0.00113 0.009642
GO:0070887 cellular response to chemical stimulus 14.14% (27/191) 0.91 0.001143 0.009658
GO:0009891 positive regulation of biosynthetic process 12.57% (24/191) 0.98 0.001141 0.009689
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 6.81% (13/191) 1.43 0.0012 0.010096
GO:0003006 developmental process involved in reproduction 22.51% (43/191) 0.66 0.001308 0.010899
GO:0031224 intrinsic component of membrane 16.23% (31/191) 0.82 0.001303 0.010911
GO:0098754 detoxification 4.19% (8/191) 1.93 0.001346 0.011169
GO:0120251 hydrocarbon biosynthetic process 5.24% (10/191) 1.67 0.001363 0.011259
GO:0009531 secondary cell wall 1.57% (3/191) 3.77 0.001401 0.011521
GO:0031957 very long-chain fatty acid-CoA ligase activity 1.05% (2/191) 5.09 0.001518 0.011787
GO:0015207 adenine transmembrane transporter activity 1.05% (2/191) 5.09 0.001518 0.011787
GO:0015208 guanine transmembrane transporter activity 1.05% (2/191) 5.09 0.001518 0.011787
GO:0035344 hypoxanthine transport 1.05% (2/191) 5.09 0.001518 0.011787
GO:0098702 adenine import across plasma membrane 1.05% (2/191) 5.09 0.001518 0.011787
GO:0098710 guanine import across plasma membrane 1.05% (2/191) 5.09 0.001518 0.011787
GO:0098721 uracil import across plasma membrane 1.05% (2/191) 5.09 0.001518 0.011787
GO:1903716 guanine transmembrane transport 1.05% (2/191) 5.09 0.001518 0.011787
GO:0099402 plant organ development 10.99% (21/191) 1.04 0.001443 0.01181
GO:1905393 plant organ formation 4.71% (9/191) 1.76 0.001535 0.011868
GO:0033759 flavone synthase activity 1.57% (3/191) 3.74 0.001494 0.012009
GO:0034785 salicylate 5-hydroxylase activity 1.57% (3/191) 3.74 0.001494 0.012009
GO:0010072 primary shoot apical meristem specification 1.57% (3/191) 3.74 0.001494 0.012009
GO:0009888 tissue development 8.38% (16/191) 1.23 0.001479 0.012054
GO:0045492 xylan biosynthetic process 2.09% (4/191) 3.0 0.001616 0.012445
GO:0070482 response to oxygen levels 5.24% (10/191) 1.63 0.00165 0.012654
GO:0015853 adenine transport 1.05% (2/191) 4.98 0.001788 0.013595
GO:0015854 guanine transport 1.05% (2/191) 4.98 0.001788 0.013595
GO:0010014 meristem initiation 2.09% (4/191) 2.94 0.001926 0.014583
GO:0006690 icosanoid metabolic process 3.14% (6/191) 2.22 0.001938 0.014612
GO:0050832 defense response to fungus 8.38% (16/191) 1.19 0.00198 0.014801
GO:0045489 pectin biosynthetic process 2.62% (5/191) 2.51 0.001975 0.014828
GO:0031328 positive regulation of cellular biosynthetic process 12.04% (23/191) 0.94 0.002004 0.014921
GO:2000014 regulation of endosperm development 1.57% (3/191) 3.59 0.002013 0.014927
GO:0043447 alkane biosynthetic process 1.05% (2/191) 4.87 0.00208 0.01536
GO:0098869 cellular oxidant detoxification 2.62% (5/191) 2.48 0.002122 0.015611
GO:0120252 hydrocarbon metabolic process 5.24% (10/191) 1.58 0.002138 0.015663
GO:0009803 cinnamic acid metabolic process 2.09% (4/191) 2.87 0.002275 0.0166
GO:0015855 pyrimidine nucleobase transport 1.05% (2/191) 4.77 0.002392 0.016844
GO:0015857 uracil transport 1.05% (2/191) 4.77 0.002392 0.016844
GO:1903791 uracil transmembrane transport 1.05% (2/191) 4.77 0.002392 0.016844
GO:1904082 pyrimidine nucleobase transmembrane transport 1.05% (2/191) 4.77 0.002392 0.016844
GO:1904823 purine nucleobase transmembrane transport 1.05% (2/191) 4.77 0.002392 0.016844
GO:0000254 C-4 methylsterol oxidase activity 1.05% (2/191) 4.77 0.002392 0.016844
GO:0016716 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen 1.05% (2/191) 4.77 0.002392 0.016844
GO:0043446 cellular alkane metabolic process 1.05% (2/191) 4.77 0.002392 0.016844
GO:0009694 jasmonic acid metabolic process 2.62% (5/191) 2.44 0.002385 0.017333
GO:0019439 aromatic compound catabolic process 5.24% (10/191) 1.55 0.002497 0.017518
GO:0051539 4 iron, 4 sulfur cluster binding 2.09% (4/191) 2.82 0.002583 0.018054
GO:0071987 WD40-repeat domain binding 1.57% (3/191) 3.45 0.002632 0.018252
GO:0120254 olefinic compound metabolic process 3.66% (7/191) 1.93 0.002624 0.018265
GO:0005350 pyrimidine nucleobase transmembrane transporter activity 1.05% (2/191) 4.68 0.002725 0.018753
GO:0015210 uracil transmembrane transporter activity 1.05% (2/191) 4.68 0.002725 0.018753
GO:0044265 cellular macromolecule catabolic process 6.81% (13/191) 1.29 0.002764 0.01895
GO:0009561 megagametogenesis 1.57% (3/191) 3.4 0.002909 0.019794
GO:0008514 organic anion transmembrane transporter activity 3.66% (7/191) 1.9 0.002905 0.019842
GO:0090691 formation of plant organ boundary 2.09% (4/191) 2.76 0.003008 0.020393
GO:0010274 hydrotropism 1.05% (2/191) 4.59 0.003078 0.020791
GO:0042537 benzene-containing compound metabolic process 3.66% (7/191) 1.88 0.003164 0.021291
GO:0048859 formation of anatomical boundary 2.09% (4/191) 2.72 0.003284 0.02202
GO:0009074 aromatic amino acid family catabolic process 1.57% (3/191) 3.33 0.003356 0.022422
GO:0072531 pyrimidine-containing compound transmembrane transport 1.05% (2/191) 4.51 0.003452 0.022889
GO:0043668 exine 1.05% (2/191) 4.51 0.003452 0.022889
GO:0031225 anchored component of membrane 3.66% (7/191) 1.83 0.003785 0.025011
GO:1902182 shoot apical meristem development 1.05% (2/191) 4.43 0.003845 0.025316
GO:0048438 floral whorl development 2.09% (4/191) 2.65 0.003888 0.025501
GO:0016405 CoA-ligase activity 1.57% (3/191) 3.24 0.004016 0.026154
GO:0015711 organic anion transport 4.19% (8/191) 1.67 0.004009 0.026205
GO:0043648 dicarboxylic acid metabolic process 2.62% (5/191) 2.25 0.004228 0.027438
GO:0045548 phenylalanine ammonia-lyase activity 1.05% (2/191) 4.36 0.004259 0.027442
GO:0090058 metaxylem development 1.05% (2/191) 4.36 0.004259 0.027442
GO:1901360 organic cyclic compound metabolic process 24.08% (46/191) 0.54 0.0045 0.02889
GO:1901361 organic cyclic compound catabolic process 5.24% (10/191) 1.42 0.00457 0.02924
GO:0009511 plasmodesmatal endoplasmic reticulum 1.05% (2/191) 4.28 0.004692 0.029915
GO:0006820 anion transport 5.24% (10/191) 1.41 0.00478 0.030368
GO:0009802 cinnamic acid ester biosynthetic process 0.52% (1/191) 7.68 0.004886 0.030406
GO:0090431 alkyl caffeate ester biosynthetic process 0.52% (1/191) 7.68 0.004886 0.030406
GO:0102406 omega-hydroxypalmitate O-sinapoyl transferase activity 0.52% (1/191) 7.68 0.004886 0.030406
GO:0102033 long-chain fatty acid omega-hydroxylase activity 0.52% (1/191) 7.68 0.004886 0.030406
GO:0120250 fatty acid omega-hydroxylase activity 0.52% (1/191) 7.68 0.004886 0.030406
GO:0016878 acid-thiol ligase activity 1.57% (3/191) 3.13 0.004944 0.03066
GO:0009150 purine ribonucleotide metabolic process 3.66% (7/191) 1.77 0.004855 0.03074
GO:0070417 cellular response to cold 2.62% (5/191) 2.19 0.005116 0.031617
GO:0052582 (+)-menthofuran synthase activity 1.05% (2/191) 4.22 0.005145 0.031689
GO:0033692 cellular polysaccharide biosynthetic process 3.14% (6/191) 1.91 0.005532 0.033961
GO:0090421 embryonic meristem initiation 1.57% (3/191) 3.07 0.005558 0.034002
GO:0002213 defense response to insect 2.09% (4/191) 2.5 0.005715 0.034845
GO:1903825 organic acid transmembrane transport 2.62% (5/191) 2.14 0.005811 0.035312
GO:0005506 iron ion binding 3.66% (7/191) 1.72 0.00585 0.035431
GO:0140359 ABC-type transporter activity 2.09% (4/191) 2.48 0.005995 0.036069
GO:0032541 cortical endoplasmic reticulum 1.57% (3/191) 3.03 0.005991 0.036166
GO:1901700 response to oxygen-containing compound 23.56% (45/191) 0.53 0.006113 0.036539
GO:0006163 purine nucleotide metabolic process 3.66% (7/191) 1.7 0.006139 0.036573
GO:0004467 long-chain fatty acid-CoA ligase activity 1.05% (2/191) 4.09 0.006108 0.036628
GO:0009555 pollen development 5.24% (10/191) 1.36 0.006256 0.037146
GO:0048480 stigma development 1.57% (3/191) 3.0 0.006444 0.038141
GO:0048609 multicellular organismal reproductive process 6.28% (12/191) 1.2 0.006595 0.038909
GO:0010981 regulation of cell wall macromolecule metabolic process 1.05% (2/191) 4.03 0.006618 0.038915
GO:0090056 regulation of chlorophyll metabolic process 2.09% (4/191) 2.43 0.006735 0.039476
GO:0099120 socially cooperative development 2.62% (5/191) 2.08 0.006915 0.040402
GO:0010038 response to metal ion 8.38% (16/191) 1.0 0.006996 0.040742
GO:0071365 cellular response to auxin stimulus 2.09% (4/191) 2.41 0.007047 0.04078
GO:0009821 alkaloid biosynthetic process 3.14% (6/191) 1.84 0.007032 0.040824
GO:0009259 ribonucleotide metabolic process 3.66% (7/191) 1.65 0.007404 0.042437
GO:1901401 regulation of tetrapyrrole metabolic process 2.09% (4/191) 2.39 0.007369 0.042506
GO:1990748 cellular detoxification 2.62% (5/191) 2.06 0.007396 0.042525
GO:0004620 phospholipase activity 2.09% (4/191) 2.38 0.007533 0.042909
GO:0072593 reactive oxygen species metabolic process 2.62% (5/191) 2.05 0.007519 0.042964
GO:0031408 oxylipin biosynthetic process 1.57% (3/191) 2.9 0.007665 0.043521
GO:0070547 L-tyrosine aminotransferase activity 1.05% (2/191) 3.92 0.007694 0.043549
GO:0005802 trans-Golgi network 4.71% (9/191) 1.39 0.007892 0.044536
GO:0002240 response to molecule of oomycetes origin 1.05% (2/191) 3.87 0.008259 0.046173
GO:0043223 cytoplasmic SCF ubiquitin ligase complex 1.05% (2/191) 3.87 0.008259 0.046173
GO:0009791 post-embryonic development 9.95% (19/191) 0.87 0.008218 0.04623
GO:0044238 primary metabolic process 40.31% (77/191) 0.34 0.008323 0.046387
GO:0019693 ribose phosphate metabolic process 3.66% (7/191) 1.62 0.008379 0.046557
GO:0005507 copper ion binding 2.62% (5/191) 2.01 0.008425 0.046673
GO:0031407 oxylipin metabolic process 1.57% (3/191) 2.85 0.008458 0.046711
GO:0085042 periarbuscular membrane 1.05% (2/191) 3.82 0.008842 0.048686
GO:0046914 transition metal ion binding 7.85% (15/191) 1.0 0.008892 0.048813
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_66 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_76 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_89 0.015 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_99 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_125 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_133 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_142 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_193 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_195 0.017 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_208 0.024 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_3 0.013 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_4 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_9 0.009 Orthogroups with 8 Potato genotypes Compare
Sequences (191) (download table)

InterPro Domains

GO Terms

Family Terms