SOLTUB.AGRIA.G00000032291

Description : 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase

Gene families : OG_02_0010575 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000032291
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_133

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
BP	GO:0000097	sulfur amino acid biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	IEA	AHRD
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005737	cytoplasm	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006555	methionine metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009066	aspartate family amino acid metabolic process	None	Extended
BP	GO:0009067	aspartate family amino acid biosynthetic process	None	Extended
BP	GO:0009086	methionine biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0010309	acireductone dioxygenase [iron(II)-requiring] activity	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	None	Extended
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	None	Extended
BP	GO:0019509	L-methionine salvage from methylthioadenosine	IEA	AHRD
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043094	cellular metabolic compound salvage	None	Extended
BP	GO:0043102	amino acid salvage	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
MF	GO:0051213	dioxygenase activity	None	Extended
BP	GO:0051302	regulation of cell division	IEA	AHRD
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071265	L-methionine biosynthetic process	None	Extended
BP	GO:0071267	L-methionine salvage	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0001676	long-chain fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0003997	acyl-CoA oxidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004452	isopentenyl-diphosphate delta-isomerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004766	spermidine synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005504	fatty acid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0005524	ATP binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005778	peroxisomal membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0005782	peroxisomal matrix	IEP	Predict GO terms from Neighborhoods
CC	GO:0005829	cytosol	IEP	Predict GO terms from Neighborhoods
BP	GO:0006557	obsolete S-adenosylmethioninamine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006595	polyamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006596	polyamine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006597	spermine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006635	fatty acid beta-oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006690	icosanoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006692	prostanoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006693	prostaglandin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007283	spermatogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0008215	spermine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008216	spermidine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008295	spermidine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008610	lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008654	phospholipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009062	fatty acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009308	amine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009309	amine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009445	putrescine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009446	putrescine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009694	jasmonic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009695	jasmonic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010894	negative regulation of steroid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0015979	photosynthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0015994	chlorophyll metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0015995	chlorophyll biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016032	viral process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016138	glycoside biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016401	palmitoyl-CoA oxidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016458	obsolete gene silencing	IEP	Predict GO terms from Neighborhoods
BP	GO:0016559	peroxisome fission	IEP	Predict GO terms from Neighborhoods
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016768	spermine synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016830	carbon-carbon lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016831	carboxy-lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016863	intramolecular oxidoreductase activity, transposing C=C bonds	IEP	Predict GO terms from Neighborhoods
BP	GO:0018933	nicotine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019079	viral genome replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0019218	regulation of steroid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019395	fatty acid oxidation	IEP	Predict GO terms from Neighborhoods
MF	GO:0030145	manganese ion binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0030165	PDZ domain binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0030258	lipid modification	IEP	Predict GO terms from Neighborhoods
MF	GO:0030750	putrescine N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0031406	carboxylic acid binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031903	microbody membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031907	microbody lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0033293	monocarboxylic acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0033540	fatty acid beta-oxidation using acyl-CoA oxidase	IEP	Predict GO terms from Neighborhoods
BP	GO:0033559	unsaturated fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0033791	3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034440	lipid oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035634	response to stilbenoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0042179	nicotine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0042579	microbody	IEP	Predict GO terms from Neighborhoods
BP	GO:0042632	cholesterol homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0042743	hydrogen peroxide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042760	very long-chain fatty acid catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0042802	identical protein binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0042803	protein homodimerization activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042810	pheromone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042811	pheromone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044106	cellular amine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045540	regulation of cholesterol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045541	negative regulation of cholesterol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045833	negative regulation of lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045939	negative regulation of steroid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046522	S-methyl-5-thioribose kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0046983	protein dimerization activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047485	protein N-terminus binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0048232	male gamete generation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048285	organelle fission	IEP	Predict GO terms from Neighborhoods
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0050810	regulation of steroid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0050992	dimethylallyl diphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0050993	dimethylallyl diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051055	negative regulation of lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0055092	sterol homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0062014	negative regulation of small molecule metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0071949	FAD binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090181	regulation of cholesterol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090206	negative regulation of cholesterol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0106118	regulation of sterol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0106119	negative regulation of sterol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0140493	very long-chain fatty acid beta-oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:1902882	regulation of response to oxidative stress	IEP	Predict GO terms from Neighborhoods
BP	GO:1902884	positive regulation of response to oxidative stress	IEP	Predict GO terms from Neighborhoods
BP	GO:1902930	regulation of alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902931	negative regulation of alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903409	reactive oxygen species biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1904069	ascaroside metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1904070	ascaroside biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011051	RmlC_Cupin_sf	14	188
IPR004313	ARD	14	168

External Links

No external refs found!

SOLTUB.AGRIA.G00000032291

Expression Profile

Co-expression Networks

Functional Annotation