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Description : ATP-dependent RNA helicase MAK5
Gene families : OG_02_0010623 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000032557 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_256 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | None | Extended |
| MF | GO:0003674 | molecular_function | None | Extended |
| MF | GO:0003676 | nucleic acid binding | None | Extended |
| MF | GO:0003723 | RNA binding | IEA | AHRD |
| MF | GO:0003724 | RNA helicase activity | IEA | AHRD |
| MF | GO:0003824 | catalytic activity | None | Extended |
| MF | GO:0004386 | helicase activity | None | Extended |
| MF | GO:0005488 | binding | None | Extended |
| MF | GO:0005524 | ATP binding | IEA | AHRD |
| CC | GO:0005575 | cellular_component | None | Extended |
| CC | GO:0005730 | nucleolus | IEA | AHRD |
| MF | GO:0008186 | ATP-dependent activity, acting on RNA | None | Extended |
| MF | GO:0016787 | hydrolase activity | IEA | AHRD |
| MF | GO:0017076 | purine nucleotide binding | None | Extended |
| MF | GO:0030554 | adenyl nucleotide binding | None | Extended |
| MF | GO:0032553 | ribonucleotide binding | None | Extended |
| MF | GO:0032555 | purine ribonucleotide binding | None | Extended |
| MF | GO:0032559 | adenyl ribonucleotide binding | None | Extended |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | None | Extended |
| MF | GO:0036094 | small molecule binding | None | Extended |
| MF | GO:0043167 | ion binding | None | Extended |
| MF | GO:0043168 | anion binding | None | Extended |
| CC | GO:0043226 | organelle | None | Extended |
| CC | GO:0043228 | non-membrane-bounded organelle | None | Extended |
| CC | GO:0043229 | intracellular organelle | None | Extended |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | None | Extended |
| MF | GO:0097159 | organic cyclic compound binding | None | Extended |
| MF | GO:0097367 | carbohydrate derivative binding | None | Extended |
| CC | GO:0110165 | cellular anatomical entity | None | Extended |
| MF | GO:0140098 | catalytic activity, acting on RNA | None | Extended |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | None | Extended |
| MF | GO:0140657 | ATP-dependent activity | None | Extended |
| MF | GO:1901265 | nucleoside phosphate binding | None | Extended |
| MF | GO:1901363 | heterocyclic compound binding | None | Extended |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000054 | ribosomal subunit export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000055 | ribosomal large subunit export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000373 | Group II intron splicing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000447 | endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000469 | cleavage involved in rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000478 | endonucleolytic cleavage involved in rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000479 | endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001829 | trophectodermal cell differentiation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005654 | nucleoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005694 | chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005697 | telomerase holoenzyme complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006364 | rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006405 | RNA export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007089 | traversing start control point of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008187 | poly-pyrimidine tract binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008266 | poly(U) RNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008380 | RNA splicing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016072 | rRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016973 | poly(A)+ mRNA export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0017004 | cytochrome complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030515 | snoRNA binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030684 | preribosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030686 | 90S preribosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030688 | preribosome, small subunit precursor | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031039 | macronucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033750 | ribosome localization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034046 | poly(G) binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034097 | response to cytokine | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034470 | ncRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042254 | ribosome biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042273 | ribosomal large subunit biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044085 | cellular component biogenesis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0045177 | apical part of cell | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051168 | nuclear export | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051169 | nuclear transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070034 | telomerase RNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070555 | response to interleukin-1 | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070717 | poly-purine tract binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071219 | cellular response to molecule of bacterial origin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071222 | cellular response to lipopolysaccharide | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071345 | cellular response to cytokine stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071347 | cellular response to interleukin-1 | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090502 | RNA phosphodiester bond hydrolysis, endonucleolytic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900087 | positive regulation of G1/S transition of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902806 | regulation of cell cycle G1/S phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902808 | positive regulation of cell cycle G1/S phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904868 | telomerase catalytic core complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905323 | telomerase holoenzyme complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990823 | response to leukemia inhibitory factor | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990830 | cellular response to leukemia inhibitory factor | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000045 | regulation of G1/S transition of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| No external refs found! |
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