SOLTUB.AGRIA.G00000003308

Description : Zinc finger family protein

Gene families : OG_02_0012198 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000003308
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_11

Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	IEA	AHRD
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	IEA	AHRD
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009414	response to water deprivation	IEA	AHRD
BP	GO:0009415	response to water	None	Extended
BP	GO:0009416	response to light stimulus	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEA	AHRD
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	IEA	AHRD
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0048235	pollen sperm cell differentiation	IEA	AHRD
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	IEA	AHRD
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000792	heterochromatin	IEP	Predict GO terms from Neighborhoods
BP	GO:0001501	skeletal system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0001570	vasculogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0001890	placenta development	IEP	Predict GO terms from Neighborhoods
MF	GO:0005215	transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005372	water transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005451	monovalent cation:proton antiporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0005547	phosphatidylinositol-3,4,5-trisphosphate binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005794	Golgi apparatus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006354	DNA-templated transcription elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006482	protein demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006811	ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006873	cellular ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006885	regulation of pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0007035	vacuolar acidification	IEP	Predict GO terms from Neighborhoods
BP	GO:0007369	gastrulation	IEP	Predict GO terms from Neighborhoods
MF	GO:0008028	monocarboxylic acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008168	methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008169	C-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008214	protein dealkylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008553	P-type proton-exporting transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009638	phototropism	IEP	Predict GO terms from Neighborhoods
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009877	nodulation	IEP	Predict GO terms from Neighborhoods
MF	GO:0009881	photoreceptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0009882	blue light photoreceptor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0009925	basal plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0010023	proanthocyanidin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010036	response to boron-containing substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0010118	stomatal movement	IEP	Predict GO terms from Neighborhoods
MF	GO:0010181	FMN binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	Predict GO terms from Neighborhoods
MF	GO:0010314	phosphatidylinositol-5-phosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0010360	negative regulation of anion channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010361	regulation of anion channel activity by blue light	IEP	Predict GO terms from Neighborhoods
BP	GO:0010362	negative regulation of anion channel activity by blue light	IEP	Predict GO terms from Neighborhoods
BP	GO:0010452	histone H3-K36 methylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0015075	ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015078	proton transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015105	arsenite transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015115	silicate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015129	lactate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015166	polyol transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015168	glycerol transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015204	urea transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015250	water channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015298	solute:cation antiporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015299	solute:proton antiporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015662	P-type ion transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015700	arsenite transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015708	silicic acid import across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0015727	lactate transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015791	polyol transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015793	glycerol transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015840	urea transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0016278	lysine N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0016328	lateral plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0016570	histone modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0016577	histone demethylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016759	cellulose synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016866	intramolecular transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016922	nuclear receptor binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0018023	peptidyl-lysine trimethylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019321	pentose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019322	pentose biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019566	arabinose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019567	arabinose biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019725	cellular homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0019755	one-carbon compound transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0019829	ATPase-coupled cation transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019953	sexual reproduction	IEP	Predict GO terms from Neighborhoods
MF	GO:0022804	active transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022853	active ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022857	transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030003	cellular cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030004	cellular monovalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030007	cellular potassium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030641	regulation of cellular pH	IEP	Predict GO terms from Neighborhoods
CC	GO:0030666	endocytic vesicle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031056	regulation of histone modification	IEP	Predict GO terms from Neighborhoods
CC	GO:0031464	Cul4A-RING E3 ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0032259	methylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0032266	phosphatidylinositol-3-phosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032410	negative regulation of transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032413	negative regulation of ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0032451	demethylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0032452	histone demethylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0032453	histone H3-methyl-lysine-4 demethylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0032454	histone H3-methyl-lysine-9 demethylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032878	regulation of establishment or maintenance of cell polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:0033356	UDP-L-arabinose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034219	carbohydrate transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0034220	ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0034720	histone H3-K4 demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0034763	negative regulation of transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0034766	negative regulation of ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0035065	regulation of histone acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035445	borate transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0036211	protein modification process	IEP	Predict GO terms from Neighborhoods
MF	GO:0042054	histone methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043271	negative regulation of ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0043412	macromolecule modification	IEP	Predict GO terms from Neighborhoods
CC	GO:0043661	peribacteroid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0044703	multi-organism reproductive process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045815	epigenetic maintenance of chromatin in transcription-competent conformation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046364	monosaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046685	response to arsenic-containing substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0046713	borate transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0046715	active borate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048439	flower morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048568	embryonic organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048729	tissue morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048766	root hair initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048827	phyllome development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048863	stem cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051452	intracellular pH reduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0051453	regulation of intracellular pH	IEP	Predict GO terms from Neighborhoods
MF	GO:0052624	2-phytyl-1,4-naphthoquinone methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052691	UDP-arabinopyranose mutase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0055067	monovalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055080	cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055082	cellular chemical homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055085	transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0060411	cardiac septum morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060413	atrial septum morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060429	epithelium development	IEP	Predict GO terms from Neighborhoods
BP	GO:0060562	epithelial tube morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060603	mammary gland duct morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0062075	pollen aperture formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0070076	histone lysine demethylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0070273	phosphatidylinositol-4-phosphate binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0070300	phosphatidic acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0070988	demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0071918	urea transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0080025	phosphatidylinositol-3,5-bisphosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0080029	cellular response to boron-containing substance levels	IEP	Predict GO terms from Neighborhoods
MF	GO:0080150	S-adenosyl-L-methionine:benzoic acid carboxyl methyl transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080170	hydrogen peroxide transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0098655	cation transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0098658	inorganic anion import across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0099587	inorganic ion import across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0120029	proton export across plasma membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0140358	P-type transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140457	protein demethylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:1901618	organic hydroxy compound transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901983	regulation of protein acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1902600	proton transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1903792	negative regulation of anion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1903960	negative regulation of anion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1990069	stomatal opening	IEP	Predict GO terms from Neighborhoods
BP	GO:2000114	regulation of establishment of cell polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:2000242	negative regulation of reproductive process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000756	regulation of peptidyl-lysine acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000779	regulation of double-strand break repair	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR036236	Znf_C2H2_sf	246	346

External Links

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SOLTUB.AGRIA.G00000003308

Expression Profile

Co-expression Networks

Functional Annotation