SOLTUB.AGRIA.G00000032805

Description : Nuclear migration protein nudC

Gene families : OG_02_0020895 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000032805
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_13

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	None	Extended
BP	GO:0003002	regionalization	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005654	nucleoplasm	IEA	AHRD
CC	GO:0005794	Golgi apparatus	IEA	AHRD
CC	GO:0005815	microtubule organizing center	None	Extended
CC	GO:0005816	spindle pole body	IEA	AHRD
CC	GO:0005819	spindle	None	Extended
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006457	protein folding	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007018	microtubule-based movement	None	Extended
BP	GO:0007051	spindle organization	None	Extended
BP	GO:0007052	mitotic spindle organization	IEA	AHRD
BP	GO:0007080	mitotic metaphase plate congression	IEA	AHRD
BP	GO:0007097	nuclear migration	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	None	Extended
BP	GO:0009555	pollen development	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009880	embryonic pattern specification	IEA	AHRD
BP	GO:0009965	leaf morphogenesis	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010286	heat acclimation	IEA	AHRD
BP	GO:0010450	inflorescence meristem growth	IEA	AHRD
BP	GO:0010970	transport along microtubule	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030473	nuclear migration along microtubule	IEA	AHRD
CC	GO:0030496	midbody	IEA	AHRD
BP	GO:0030705	cytoskeleton-dependent intracellular transport	None	Extended
BP	GO:0031505	fungal-type cell wall organization	IEA	AHRD
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0035266	meristem growth	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043434	response to peptide hormone	IEA	AHRD
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048229	gametophyte development	None	Extended
BP	GO:0048444	floral organ morphogenesis	None	Extended
BP	GO:0048448	stamen morphogenesis	IEA	AHRD
BP	GO:0048461	flower structural organization	IEA	AHRD
BP	GO:0048532	anatomical structure arrangement	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048832	specification of plant organ number	None	Extended
BP	GO:0048833	specification of floral organ number	IEA	AHRD
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050000	chromosome localization	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0051082	unfolded protein binding	IEA	AHRD
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051303	establishment of chromosome localization	None	Extended
BP	GO:0051310	metaphase plate congression	None	Extended
BP	GO:0051640	organelle localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051647	nucleus localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051656	establishment of organelle localization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0071852	fungal-type cell wall organization or biogenesis	None	Extended
BP	GO:0072384	organelle transport along microtubule	None	Extended
CC	GO:0072686	mitotic spindle	IEA	AHRD
BP	GO:0090697	post-embryonic plant organ morphogenesis	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
BP	GO:0099111	microtubule-based transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901652	response to peptide	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902850	microtubule cytoskeleton organization involved in mitosis	None	Extended
BP	GO:1903047	mitotic cell cycle process	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000152	nuclear ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0001503	ossification	IEP	Predict GO terms from Neighborhoods
BP	GO:0001835	blastocyst hatching	IEP	Predict GO terms from Neighborhoods
BP	GO:0002021	response to dietary excess	IEP	Predict GO terms from Neighborhoods
CC	GO:0005680	anaphase-promoting complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006023	aminoglycan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006024	glycosaminoglycan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006029	proteoglycan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007064	mitotic sister chromatid cohesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0007095	mitotic G2 DNA damage checkpoint signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0007605	sensory perception of sound	IEP	Predict GO terms from Neighborhoods
MF	GO:0008013	beta-catenin binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008022	protein C-terminus binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0008587	imaginal disc-derived wing margin morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0008593	regulation of Notch signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009101	glycoprotein biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009226	nucleotide-sugar biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009786	regulation of asymmetric cell division	IEP	Predict GO terms from Neighborhoods
BP	GO:0009894	regulation of catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009895	negative regulation of catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009954	proximal/distal pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010256	endomembrane system organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0015012	heparan sulfate proteoglycan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019321	pentose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0022416	chaeta development	IEP	Predict GO terms from Neighborhoods
BP	GO:0030166	proteoglycan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030201	heparan sulfate proteoglycan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030203	glycosaminoglycan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030204	chondroitin sulfate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030206	chondroitin sulfate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031063	regulation of histone deacetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031065	positive regulation of histone deacetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031145	anaphase-promoting complex-dependent catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0031915	positive regulation of synaptic plasticity	IEP	Predict GO terms from Neighborhoods
CC	GO:0032580	Golgi cisterna membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0032873	negative regulation of stress-activated MAPK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0033319	UDP-D-xylose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033320	UDP-D-xylose biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0033597	mitotic checkpoint complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0035188	hatching	IEP	Predict GO terms from Neighborhoods
BP	GO:0040020	regulation of meiotic nuclear division	IEP	Predict GO terms from Neighborhoods
BP	GO:0042176	regulation of protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042177	negative regulation of protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042461	photoreceptor cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0042732	D-xylose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043627	response to estrogen	IEP	Predict GO terms from Neighborhoods
BP	GO:0044818	mitotic G2/M transition checkpoint	IEP	Predict GO terms from Neighborhoods
BP	GO:0045444	fat cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045570	regulation of imaginal disc growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0045572	positive regulation of imaginal disc growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0045732	positive regulation of protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045747	positive regulation of Notch signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0046328	regulation of JNK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0046329	negative regulation of JNK cascade	IEP	Predict GO terms from Neighborhoods
MF	GO:0048040	UDP-glucuronate decarboxylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048441	petal development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050773	regulation of dendrite development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050872	white fat cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050954	sensory perception of mechanical stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0051216	cartilage development	IEP	Predict GO terms from Neighborhoods
BP	GO:0051438	regulation of ubiquitin-protein transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051443	positive regulation of ubiquitin-protein transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051446	positive regulation of meiotic cell cycle	IEP	Predict GO terms from Neighborhoods
MF	GO:0055106	ubiquitin-protein transferase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060612	adipose tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0060613	fat pad development	IEP	Predict GO terms from Neighborhoods
BP	GO:0061448	connective tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0070050	neuron cellular homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0070303	negative regulation of stress-activated protein kinase signaling cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0070306	lens fiber cell differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0070403	NAD+ binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0071684	organism emergence from protective structure	IEP	Predict GO terms from Neighborhoods
BP	GO:0090128	regulation of synapse maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090129	positive regulation of synapse maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090207	regulation of triglyceride metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090311	regulation of protein deacetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090312	positive regulation of protein deacetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090344	obsolete negative regulation of cell aging	IEP	Predict GO terms from Neighborhoods
MF	GO:0097027	ubiquitin-protein transferase activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901993	regulation of meiotic cell cycle phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:1901995	positive regulation of meiotic cell cycle phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:1902101	positive regulation of metaphase/anaphase transition of cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:1902102	regulation of metaphase/anaphase transition of meiotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:1902104	positive regulation of metaphase/anaphase transition of meiotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:1903510	mucopolysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903538	regulation of meiotic cell cycle process involved in oocyte maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:1904146	positive regulation of meiotic cell cycle process involved in oocyte maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:1904666	regulation of ubiquitin protein ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1904668	positive regulation of ubiquitin protein ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1905132	regulation of meiotic chromosome separation	IEP	Predict GO terms from Neighborhoods
BP	GO:1905134	positive regulation of meiotic chromosome separation	IEP	Predict GO terms from Neighborhoods
BP	GO:1905820	positive regulation of chromosome separation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR007052	CS_dom	54	110
IPR008978	HSP20-like_chaperone	58	185

External Links

No external refs found!

SOLTUB.AGRIA.G00000032805

Expression Profile

Co-expression Networks

Functional Annotation