SOLTUB.AGRIA.G00000033201

Description : Auxin-responsive GH3 family protein

Gene families : OG_02_0001451 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000033201
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_147

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0001666	response to hypoxia	None	Extended
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002684	positive regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
BP	GO:0002833	positive regulation of response to biotic stimulus	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	IEA	AHRD
CC	GO:0009526	plastid envelope	None	Extended
BP	GO:0009555	pollen development	IEA	AHRD
BP	GO:0009595	detection of biotic stimulus	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009734	auxin-activated signaling pathway	IEA	AHRD
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009826	unidimensional cell growth	IEA	AHRD
BP	GO:0009850	auxin metabolic process	None	Extended
BP	GO:0009863	salicylic acid mediated signaling pathway	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
CC	GO:0009941	chloroplast envelope	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010112	regulation of systemic acquired resistance	IEA	AHRD
BP	GO:0010249	auxin conjugate metabolic process	IEA	AHRD
BP	GO:0010252	auxin homeostasis	IEA	AHRD
MF	GO:0010279	indole-3-acetic acid amido synthetase activity	IEA	AHRD
BP	GO:0010363	regulation of plant-type hypersensitive response	None	Extended
BP	GO:0010817	regulation of hormone levels	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0010942	positive regulation of cell death	None	Extended
BP	GO:0016046	detection of fungus	IEA	AHRD
BP	GO:0016049	cell growth	None	Extended
MF	GO:0016208	AMP binding	IEA	AHRD
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	None	Extended
MF	GO:0016881	acid-amino acid ligase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0018874	benzoate metabolic process	IEA	AHRD
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031349	positive regulation of defense response	None	Extended
MF	GO:0031406	carboxylic acid binding	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032103	positive regulation of response to external stimulus	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034052	positive regulation of plant-type hypersensitive response	IEA	AHRD
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036293	response to decreased oxygen levels	None	Extended
BP	GO:0036294	cellular response to decreased oxygen levels	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042445	hormone metabolic process	None	Extended
BP	GO:0042537	benzene-containing compound metabolic process	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
BP	GO:0042762	regulation of sulfur metabolic process	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043068	positive regulation of programmed cell death	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043455	regulation of secondary metabolic process	None	Extended
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045089	positive regulation of innate immune response	None	Extended
BP	GO:0048229	gametophyte development	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050778	positive regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051176	positive regulation of sulfur metabolic process	None	Extended
BP	GO:0051606	detection of stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0052318	regulation of phytoalexin metabolic process	None	Extended
BP	GO:0052319	regulation of phytoalexin biosynthetic process	None	Extended
BP	GO:0052320	positive regulation of phytoalexin metabolic process	None	Extended
BP	GO:0052322	positive regulation of phytoalexin biosynthetic process	None	Extended
MF	GO:0052625	4-aminobenzoate amino acid synthetase activity	IEA	AHRD
MF	GO:0052626	benzoate amino acid synthetase activity	IEA	AHRD
MF	GO:0052627	vanillate amino acid synthetase activity	IEA	AHRD
MF	GO:0052628	4-hydroxybenzoate amino acid synthetase activity	IEA	AHRD
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
MF	GO:0070406	glutamine binding	IEA	AHRD
BP	GO:0070482	response to oxygen levels	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071453	cellular response to oxygen levels	None	Extended
BP	GO:0071456	cellular response to hypoxia	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:0098543	detection of other organism	None	Extended
BP	GO:0098581	detection of external biotic stimulus	None	Extended
MF	GO:0102053	(-)-jasmonoyl-isoleucine synthetase activity	IEA	AHRD
MF	GO:0102057	jasmonoyl-valine synthetase activity	IEA	AHRD
MF	GO:0102058	jasmonoyl-leucine synthetase activity	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1900376	regulation of secondary metabolite biosynthetic process	None	Extended
BP	GO:1900378	positive regulation of secondary metabolite biosynthetic process	None	Extended
BP	GO:1900424	regulation of defense response to bacterium	IEA	AHRD
BP	GO:1901182	regulation of camalexin biosynthetic process	None	Extended
BP	GO:1901183	positive regulation of camalexin biosynthetic process	IEA	AHRD
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005048	signal sequence binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005770	late endosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0006605	protein targeting	IEP	Predict GO terms from Neighborhoods
BP	GO:0006623	protein targeting to vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0006892	post-Golgi vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006896	Golgi to vacuole transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0007034	vacuolar transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0009940	amino-terminal vacuolar sorting propeptide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0010209	vacuolar sorting signal binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0033218	amide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0042277	peptide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0048193	Golgi vesicle transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0072594	establishment of protein localization to organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0072665	protein localization to vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0072666	establishment of protein localization to vacuole	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004993	GH3	31	581

External Links

No external refs found!

SOLTUB.AGRIA.G00000033201

Expression Profile

Co-expression Networks

Functional Annotation