Description : SMAD/FHA domain-containing protein
Gene families : OG_02_0018276 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000003377 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_176 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000014 | single-stranded DNA endodeoxyribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000077 | DNA damage checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000109 | nucleotide-excision repair complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000112 | nucleotide-excision repair factor 3 complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000212 | meiotic spindle organization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000217 | DNA secondary structure binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000373 | Group II intron splicing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000418 | RNA polymerase IV complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000419 | RNA polymerase V complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000785 | chromatin | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000792 | heterochromatin | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000923 | equatorial microtubule organizing center | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000930 | gamma-tubulin complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001671 | ATPase activator activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001882 | nucleoside binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004520 | endodeoxyribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004536 | deoxyribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005522 | profilin binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005635 | nuclear envelope | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005652 | nuclear lamina | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005654 | nucleoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005665 | RNA polymerase II, core complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005694 | chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005730 | nucleolus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005737 | cytoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005814 | centriole | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005816 | spindle pole body | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005827 | polar microtubule | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005930 | axoneme | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006259 | DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006281 | DNA repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006284 | base-excision repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006295 | nucleotide-excision repair, DNA incision, 3'-to lesion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006301 | postreplication repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006304 | DNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006305 | DNA alkylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006306 | DNA methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006346 | DNA methylation-dependent heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006351 | DNA-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006353 | DNA-templated transcription termination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006366 | transcription by RNA polymerase II | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006378 | mRNA polyadenylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006397 | mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006403 | RNA localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006458 | 'de novo' protein folding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006950 | response to stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007140 | male meiotic nuclear division | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007566 | embryo implantation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008150 | biological_process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0008275 | gamma-tubulin small complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008298 | intracellular mRNA localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008380 | RNA splicing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009898 | cytoplasmic side of plasma membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010213 | non-photoreactive DNA repair | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0010369 | chromocenter | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010609 | mRNA localization resulting in post-transcriptional regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010968 | regulation of microtubule nucleation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015979 | photosynthesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016073 | snRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016180 | snRNA processing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016363 | nuclear matrix | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016604 | nuclear body | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016888 | endodeoxyribonuclease activity, producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0017108 | 5'-flap endonuclease activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030422 | siRNA processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030544 | Hsp70 protein binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030880 | RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030895 | apolipoprotein B mRNA editing enzyme complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031048 | small non-coding RNA-dependent heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031110 | regulation of microtubule polymerization or depolymerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031112 | positive regulation of microtubule polymerization or depolymerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031113 | regulation of microtubule polymerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031116 | positive regulation of microtubule polymerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031514 | motile cilium | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031981 | nuclear lumen | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032039 | integrator complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032259 | methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032271 | regulation of protein polymerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032273 | positive regulation of protein polymerization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032549 | ribonucleoside binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032781 | positive regulation of ATP-dependent activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033554 | cellular response to stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033683 | nucleotide-excision repair, DNA incision | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034470 | ncRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034472 | snRNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035967 | cellular response to topologically incorrect protein | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0036126 | sperm flagellum | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036297 | interstrand cross-link repair | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0036477 | somatodendritic compartment | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042026 | protein refolding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043015 | gamma-tubulin binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043197 | dendritic spine | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043226 | organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043229 | intracellular organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043414 | macromolecule methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043462 | regulation of ATP-dependent activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043489 | RNA stabilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043578 | nuclear matrix organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043618 | regulation of transcription from RNA polymerase II promoter in response to stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043620 | regulation of DNA-templated transcription in response to stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043631 | RNA polyadenylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0044183 | protein folding chaperone | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0044309 | neuron spine | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044728 | DNA methylation or demethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045010 | actin nucleation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0045293 | mRNA editing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048255 | mRNA stabilization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0048256 | flap endonuclease activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048317 | seed morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050708 | regulation of protein secretion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050714 | positive regulation of protein secretion | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051011 | microtubule minus-end binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051084 | 'de novo' post-translational protein folding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051085 | chaperone cofactor-dependent protein refolding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051117 | ATPase binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051495 | positive regulation of cytoskeleton organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051716 | cellular response to stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051788 | response to misfolded protein | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0061827 | sperm head | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070918 | small regulatory ncRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071218 | cellular response to misfolded protein | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071479 | cellular response to ionizing radiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071704 | organic substance metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080188 | gene silencing by RNA-directed DNA methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090063 | positive regulation of microtubule nucleation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090083 | regulation of inclusion body assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090084 | negative regulation of inclusion body assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090615 | mitochondrial mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090617 | mitochondrial mRNA 5'-end processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097201 | negative regulation of transcription from RNA polymerase II promoter in response to stress | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097224 | sperm connecting piece | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097298 | regulation of nucleus size | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097435 | supramolecular fiber organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097729 | 9+2 motile cilium | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0097747 | RNA polymerase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0099522 | cytosolic region | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0099524 | postsynaptic cytosol | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140677 | molecular function activator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140718 | facultative heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902369 | negative regulation of RNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902373 | negative regulation of mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902905 | positive regulation of supramolecular fiber organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903312 | negative regulation of mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904158 | axonemal central apparatus assembly | IEP | Predict GO terms from Neighborhoods |
| No external refs found! |