SOLTUB.AGRIA.G00000033366

Description : Chlorophyll a-b binding protein, chloroplastic

Gene families : OG_02_0016750 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000033366
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_49

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009409	response to cold	IEA	AHRD
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	AHRD
CC	GO:0009535	chloroplast thylakoid membrane	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009644	response to high light intensity	IEA	AHRD
BP	GO:0009645	response to low light intensity stimulus	IEA	AHRD
BP	GO:0009765	photosynthesis, light harvesting	None	Extended
BP	GO:0009768	photosynthesis, light harvesting in photosystem I	IEA	AHRD
CC	GO:0009782	photosystem I antenna complex	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
CC	GO:0010287	plastoglobule	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	IEA	AHRD
MF	GO:0016168	chlorophyll binding	IEA	AHRD
BP	GO:0018298	obsolete protein-chromophore linkage	IEA	AHRD
MF	GO:0019904	protein domain specific binding	IEA	AHRD
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0031409	pigment binding	IEA	AHRD
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	AHRD
MF	GO:0046906	tetrapyrrole binding	None	Extended
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0009503	thylakoid light-harvesting complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0009508	plastid chromosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0009515	granal stacked thylakoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0009517	PSII associated light-harvesting complex II	IEP	Predict GO terms from Neighborhoods
CC	GO:0009522	photosystem I	IEP	Predict GO terms from Neighborhoods
CC	GO:0009526	plastid envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0009533	chloroplast stromal thylakoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0009534	chloroplast thylakoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0009538	photosystem I reaction center	IEP	Predict GO terms from Neighborhoods
CC	GO:0009543	chloroplast thylakoid lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:0009579	thylakoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009767	photosynthetic electron transport chain	IEP	Predict GO terms from Neighborhoods
BP	GO:0009773	photosynthetic electron transport in photosystem I	IEP	Predict GO terms from Neighborhoods
CC	GO:0009783	photosystem II antenna complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0009941	chloroplast envelope	IEP	Predict GO terms from Neighborhoods
BP	GO:0010109	regulation of photosynthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010196	nonphotochemical quenching	IEP	Predict GO terms from Neighborhoods
BP	GO:0010205	photoinhibition	IEP	Predict GO terms from Neighborhoods
BP	GO:0010207	photosystem II assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0015979	photosynthesis	IEP	Predict GO terms from Neighborhoods
CC	GO:0030076	light-harvesting complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0030093	chloroplast photosystem I	IEP	Predict GO terms from Neighborhoods
CC	GO:0030094	plasma membrane-derived photosystem I	IEP	Predict GO terms from Neighborhoods
CC	GO:0031676	plasma membrane-derived thylakoid membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031967	organelle envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0031975	envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0031976	plastid thylakoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0031978	plastid thylakoid lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	Predict GO terms from Neighborhoods
BP	GO:0042549	photosystem II stabilization	IEP	Predict GO terms from Neighborhoods
CC	GO:0042717	plasma membrane-derived chromatophore membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0043155	negative regulation of photosynthesis, light reaction	IEP	Predict GO terms from Neighborhoods
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	Predict GO terms from Neighborhoods
MF	GO:0051219	phosphoprotein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0090391	granum assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0097753	membrane bending	IEP	Predict GO terms from Neighborhoods
CC	GO:0098590	plasma membrane region	IEP	Predict GO terms from Neighborhoods
CC	GO:0098807	chloroplast thylakoid membrane protein complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1905156	negative regulation of photosynthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1990066	energy quenching	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR022796	Chloroa_b-bind	64	243

External Links

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SOLTUB.AGRIA.G00000033366

Expression Profile

Co-expression Networks

Functional Annotation