SOLTUB.AGRIA.G00000033408


Description : LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)


Gene families : OG_02_0016757 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000033408
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_159


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
BP GO:0009299 mRNA transcription IEA AHRD
BP GO:0009637 response to blue light IEA AHRD
BP GO:0009826 unidimensional cell growth IEA AHRD
BP GO:0010114 response to red light IEA AHRD
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEA AHRD
BP GO:0010218 response to far red light IEA AHRD
BP GO:0010492 maintenance of shoot apical meristem identity IEA AHRD
MF GO:0042803 protein homodimerization activity IEA AHRD
BP GO:0045892 negative regulation of DNA-templated transcription IEA AHRD
BP GO:0048441 petal development IEA AHRD
BP GO:0048834 specification of petal number IEA AHRD
BP GO:0080050 regulation of seed development IEA AHRD
BP GO:0090698 post-embryonic plant morphogenesis IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000023 maltose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000025 maltose catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000271 polysaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0000976 transcription cis-regulatory region binding IEP Predict GO terms from Neighborhoods
MF GO:0001046 core promoter sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0001067 transcription regulatory region nucleic acid binding IEP Predict GO terms from Neighborhoods
BP GO:0001906 cell killing IEP Predict GO terms from Neighborhoods
MF GO:0003690 double-stranded DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004338 glucan exo-1,3-beta-glucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004396 hexokinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predict GO terms from Neighborhoods
MF GO:0004565 beta-galactosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004567 beta-mannosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005452 solute:inorganic anion antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005977 glycogen metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005978 glycogen biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0005982 starch metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005983 starch catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005984 disaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005996 monosaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006000 fructose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006073 cellular glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006112 energy reserve metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006720 isoprenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006721 terpenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0008300 isoprenoid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0008865 fructokinase activity IEP Predict GO terms from Neighborhoods
MF GO:0008878 glucose-1-phosphate adenylyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009250 glucan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009311 oligosaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009313 oligosaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009413 response to flooding IEP Predict GO terms from Neighborhoods
CC GO:0009501 amyloplast IEP Predict GO terms from Neighborhoods
BP GO:0009590 detection of gravity IEP Predict GO terms from Neighborhoods
BP GO:0009643 photosynthetic acclimation IEP Predict GO terms from Neighborhoods
BP GO:0009648 photoperiodism IEP Predict GO terms from Neighborhoods
MF GO:0009670 triose-phosphate:phosphate antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:0009685 gibberellin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009744 response to sucrose IEP Predict GO terms from Neighborhoods
BP GO:0009746 response to hexose IEP Predict GO terms from Neighborhoods
BP GO:0009749 response to glucose IEP Predict GO terms from Neighborhoods
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0009861 jasmonic acid and ethylene-dependent systemic resistance IEP Predict GO terms from Neighborhoods
BP GO:0009867 jasmonic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009877 nodulation IEP Predict GO terms from Neighborhoods
BP GO:0009888 tissue development IEP Predict GO terms from Neighborhoods
BP GO:0009891 positive regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009939 positive regulation of gibberellic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP Predict GO terms from Neighborhoods
BP GO:0009954 proximal/distal pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0009959 negative gravitropism IEP Predict GO terms from Neighborhoods
BP GO:0009965 leaf morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010026 trichome differentiation IEP Predict GO terms from Neighborhoods
BP GO:0010031 circumnutation IEP Predict GO terms from Neighborhoods
BP GO:0010087 phloem or xylem histogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010088 phloem development IEP Predict GO terms from Neighborhoods
CC GO:0010170 glucose-1-phosphate adenylyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0010254 nectary development IEP Predict GO terms from Neighborhoods
BP GO:0010371 regulation of gibberellin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010431 seed maturation IEP Predict GO terms from Neighborhoods
BP GO:0010434 bract formation IEP Predict GO terms from Neighborhoods
BP GO:0010444 guard mother cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010601 positive regulation of auxin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010865 stipule development IEP Predict GO terms from Neighborhoods
MF GO:0015114 phosphate ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015119 hexose phosphate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015120 phosphoglycerate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015121 phosphoenolpyruvate:phosphate antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015152 glucose-6-phosphate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015315 organophosphate:inorganic phosphate antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015355 secondary active monocarboxylate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015712 hexose phosphate transport IEP Predict GO terms from Neighborhoods
BP GO:0015713 phosphoglycerate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015714 phosphoenolpyruvate transport IEP Predict GO terms from Neighborhoods
BP GO:0015717 triose phosphate transport IEP Predict GO terms from Neighborhoods
BP GO:0015760 glucose-6-phosphate transport IEP Predict GO terms from Neighborhoods
MF GO:0015923 mannosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0015925 galactosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Predict GO terms from Neighborhoods
BP GO:0016042 lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016054 organic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016101 diterpenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016103 diterpenoid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016115 terpenoid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016157 sucrose synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0016444 somatic cell DNA recombination IEP Predict GO terms from Neighborhoods
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0019200 carbohydrate kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0019252 starch biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019318 hexose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0021700 developmental maturation IEP Predict GO terms from Neighborhoods
MF GO:0030247 polysaccharide binding IEP Predict GO terms from Neighborhoods
BP GO:0030856 regulation of epithelial cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031347 regulation of defense response IEP Predict GO terms from Neighborhoods
BP GO:0031640 killing of cells of another organism IEP Predict GO terms from Neighborhoods
BP GO:0033491 coniferin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0033907 beta-D-fucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity IEP Predict GO terms from Neighborhoods
BP GO:0034284 response to monosaccharide IEP Predict GO terms from Neighborhoods
BP GO:0034285 response to disaccharide IEP Predict GO terms from Neighborhoods
BP GO:0034389 lipid droplet organization IEP Predict GO terms from Neighborhoods
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0035436 triose phosphate transmembrane transport IEP Predict GO terms from Neighborhoods
CC GO:0036477 somatodendritic compartment IEP Predict GO terms from Neighborhoods
BP GO:0042873 aldonate transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0042879 aldonate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0043565 sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0044042 glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044242 cellular lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044262 cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044264 cellular polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045069 regulation of viral genome replication IEP Predict GO terms from Neighborhoods
BP GO:0045071 negative regulation of viral genome replication IEP Predict GO terms from Neighborhoods
BP GO:0045487 gibberellin catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0045543 gibberellin 2-beta-dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0045604 regulation of epidermal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045682 regulation of epidermis development IEP Predict GO terms from Neighborhoods
BP GO:0045893 positive regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046352 disaccharide catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046527 glucosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0046686 response to cadmium ion IEP Predict GO terms from Neighborhoods
BP GO:0046835 carbohydrate phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0046870 cadmium ion binding IEP Predict GO terms from Neighborhoods
BP GO:0046886 positive regulation of hormone biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0047668 amygdalin beta-glucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0047701 beta-L-arabinosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0047782 coniferin beta-glucosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0048317 seed morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048439 flower morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048525 negative regulation of viral process IEP Predict GO terms from Neighborhoods
BP GO:0048572 short-day photoperiodism IEP Predict GO terms from Neighborhoods
BP GO:0048573 photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048575 short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048609 multicellular organismal reproductive process IEP Predict GO terms from Neighborhoods
BP GO:0048657 anther wall tapetum cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048878 chemical homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0050224 prunasin beta-glucosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0050879 multicellular organismal movement IEP Predict GO terms from Neighborhoods
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0051213 dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0051254 positive regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051704 obsolete multi-organism process IEP Predict GO terms from Neighborhoods
MF GO:0052634 C-19 gibberellin 2-beta-dioxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0052736 beta-glucanase activity IEP Predict GO terms from Neighborhoods
BP GO:0055063 sulfate ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055073 cadmium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0065001 specification of axis polarity IEP Predict GO terms from Neighborhoods
MF GO:0070566 adenylyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0071484 cellular response to light intensity IEP Predict GO terms from Neighborhoods
BP GO:0071486 cellular response to high light intensity IEP Predict GO terms from Neighborhoods
BP GO:0071695 anatomical structure maturation IEP Predict GO terms from Neighborhoods
MF GO:0071917 triose-phosphate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0072505 divalent inorganic anion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0072708 response to sorbitol IEP Predict GO terms from Neighborhoods
MF GO:0080079 cellobiose glucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0080083 beta-gentiobiose beta-glucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0089721 phosphoenolpyruvate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0090355 positive regulation of auxin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0102500 beta-maltose 4-alpha-glucanotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0140323 solute:anion antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:1901804 beta-glucoside metabolic process IEP Predict GO terms from Neighborhoods
CC GO:1902503 adenylyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1903900 regulation of viral life cycle IEP Predict GO terms from Neighborhoods
BP GO:1905392 plant organ morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Predict GO terms from Neighborhoods
BP GO:2000122 negative regulation of stomatal complex development IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006936 ALOG_dom 41 160
No external refs found!