SOLTUB.AGRIA.G00000033450

Description : Mannan endo-1,4-beta-mannosidase 1

Gene families : OG_02_0023619 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000033450
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_154

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004567	beta-mannosidase activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009827	plant-type cell wall modification	None	Extended
BP	GO:0009828	plant-type cell wall loosening	IEA	AHRD
BP	GO:0009845	seed germination	IEA	AHRD
BP	GO:0009900	dehiscence	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010047	fruit dehiscence	IEA	AHRD
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010412	mannan metabolic process	IEA	AHRD
MF	GO:0015923	mannosidase activity	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0016985	mannan endo-1,4-beta-mannosidase activity	IEA	AHRD
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
CC	GO:0048046	apoplast	IEA	AHRD
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0061687	detoxification of inorganic compound	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071585	detoxification of cadmium ion	IEA	AHRD
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0071944	cell periphery	IEA	AHRD
BP	GO:0098754	detoxification	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1990059	fruit valve development	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
BP	GO:0001763	morphogenesis of a branching structure	IEP	Predict GO terms from Neighborhoods
BP	GO:0002009	morphogenesis of an epithelium	IEP	Predict GO terms from Neighborhoods
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005768	endosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005802	trans-Golgi network	IEP	Predict GO terms from Neighborhoods
BP	GO:0006004	fucose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007155	cell adhesion	IEP	Predict GO terms from Neighborhoods
MF	GO:0008234	cysteine-type peptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008643	carbohydrate transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0009641	shade avoidance	IEP	Predict GO terms from Neighborhoods
BP	GO:0009653	anatomical structure morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009742	brassinosteroid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009909	regulation of flower development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010017	red or far-red light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010099	regulation of photomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010161	red light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010223	secondary shoot formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010346	shoot axis formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010395	rhamnogalacturonan I metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010411	xyloglucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010422	regulation of brassinosteroid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010893	positive regulation of steroid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0015136	sialic acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015739	sialic acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016413	O-acetyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016579	protein deubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0019218	regulation of steroid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019318	hexose metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0030173	integral component of Golgi membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031228	intrinsic component of Golgi membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031984	organelle subcompartment	IEP	Predict GO terms from Neighborhoods
BP	GO:0032350	regulation of hormone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032352	positive regulation of hormone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043401	steroid hormone mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045036	protein targeting to chloroplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0045489	pectin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045824	negative regulation of innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0045940	positive regulation of steroid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046885	regulation of hormone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046886	positive regulation of hormone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048444	floral organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048446	petal morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048576	positive regulation of short-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048577	negative regulation of short-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048579	negative regulation of long-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048582	positive regulation of post-embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048586	regulation of long-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048587	regulation of short-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048729	tissue morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048831	regulation of shoot system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050777	negative regulation of immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0050810	regulation of steroid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051094	positive regulation of developmental process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052325	cell wall pectin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052546	cell wall pectin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0060026	convergent extension	IEP	Predict GO terms from Neighborhoods
BP	GO:0060027	convergent extension involved in gastrulation	IEP	Predict GO terms from Neighborhoods
MF	GO:0061578	Lys63-specific deubiquitinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0070646	protein modification by small protein removal	IEP	Predict GO terms from Neighborhoods
BP	GO:0071489	cellular response to red or far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0071491	cellular response to red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0072596	establishment of protein localization to chloroplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0072598	protein localization to chloroplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0080147	root hair cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0080157	regulation of plant-type cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0090030	regulation of steroid hormone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0098791	Golgi apparatus subcompartment	IEP	Predict GO terms from Neighborhoods
MF	GO:0101005	deubiquitinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901264	carbohydrate derivative transport	IEP	Predict GO terms from Neighborhoods
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1902446	regulation of shade avoidance	IEP	Predict GO terms from Neighborhoods
BP	GO:1902448	positive regulation of shade avoidance	IEP	Predict GO terms from Neighborhoods
MF	GO:1990380	Lys48-specific deubiquitinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:2000030	regulation of response to red or far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:2000243	positive regulation of reproductive process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000488	positive regulation of brassinosteroid biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001547	Glyco_hydro_5	83	387
IPR017853	Glycoside_hydrolase_SF	50	411

External Links

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SOLTUB.AGRIA.G00000033450

Expression Profile

Co-expression Networks

Functional Annotation