SOLTUB.AGRIA.G00000003409

Description : Ring finger protein, putative

Gene families : OG_02_0018281 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000003409
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_207

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	AHRD
MF	GO:0005488	binding	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	IEA	AHRD
BP	GO:0007584	response to nutrient	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010200	response to chitin	IEA	AHRD
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	AHRD
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0033273	response to vitamin	None	Extended
BP	GO:0033591	response to L-ascorbic acid	IEA	AHRD
BP	GO:0034284	response to monosaccharide	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080167	response to karrikin	IEA	AHRD
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004035	alkaline phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004725	protein tyrosine phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005507	copper ion binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005759	mitochondrial matrix	IEP	Predict GO terms from Neighborhoods
CC	GO:0005777	peroxisome	IEP	Predict GO terms from Neighborhoods
BP	GO:0006071	glycerol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006097	glyoxylate cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0006099	tricarboxylic acid cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0006108	malate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006111	regulation of gluconeogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006114	glycerol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006413	translational initiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0008967	phosphoglycolate phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008970	phospholipase A1 activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009111	vitamin catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009344	nitrite reductase complex [NAD(P)H]	IEP	Predict GO terms from Neighborhoods
CC	GO:0009514	glyoxysome	IEP	Predict GO terms from Neighborhoods
CC	GO:0009526	plastid envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0009535	chloroplast thylakoid membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0009543	chloroplast thylakoid lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0009650	UV protection	IEP	Predict GO terms from Neighborhoods
BP	GO:0009704	de-etiolation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009767	photosynthetic electron transport chain	IEP	Predict GO terms from Neighborhoods
BP	GO:0009853	photorespiration	IEP	Predict GO terms from Neighborhoods
CC	GO:0009941	chloroplast envelope	IEP	Predict GO terms from Neighborhoods
BP	GO:0010028	xanthophyll cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0010207	photosystem II assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0010287	plastoglobule	IEP	Predict GO terms from Neighborhoods
BP	GO:0010677	negative regulation of cellular carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010906	regulation of glucose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016108	tetraterpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016116	carotenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016122	xanthophyll metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016145	S-glycoside catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016615	malate dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Predict GO terms from Neighborhoods
BP	GO:0017004	cytochrome complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0019217	regulation of fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019400	alditol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019401	alditol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019759	glycosinolate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019762	glucosinolate catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019838	growth factor binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0019915	lipid storage	IEP	Predict GO terms from Neighborhoods
CC	GO:0030027	lamellipodium	IEP	Predict GO terms from Neighborhoods
MF	GO:0030060	L-malate dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030834	regulation of actin filament depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0030836	positive regulation of actin filament depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031247	actin rod assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0031256	leading edge membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031967	organelle envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0031975	envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0031977	thylakoid lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:0031978	plastid thylakoid lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0031998	regulation of fatty acid beta-oxidation	IEP	Predict GO terms from Neighborhoods
CC	GO:0032154	cleavage furrow	IEP	Predict GO terms from Neighborhoods
BP	GO:0032361	pyridoxal phosphate catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0032587	ruffle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0033198	response to ATP	IEP	Predict GO terms from Neighborhoods
MF	GO:0033883	pyridoxal phosphatase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0034357	photosynthetic membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0035335	peptidyl-tyrosine dephosphorylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0042170	plastid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0042344	indole glucosinolate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042365	water-soluble vitamin catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042436	indole-containing compound catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0042651	thylakoid membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0042803	protein homodimerization activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042816	vitamin B6 metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042820	vitamin B6 catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042822	pyridoxal phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0043136	glycerol-3-phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044273	sulfur compound catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045721	negative regulation of gluconeogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0045912	negative regulation of carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046173	polyol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046185	aldehyde catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046320	regulation of fatty acid oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046339	diacylglycerol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046340	diacylglycerol catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046422	violaxanthin de-epoxidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0046461	neutral lipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046462	monoacylglycerol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046464	acylglycerol catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046486	glycerolipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046487	glyoxylate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046503	glycerolipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046686	response to cadmium ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0046700	heterocycle catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0047372	acylglycerol lipase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050994	regulation of lipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051017	actin filament bundle assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0051087	chaperone binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0052651	monoacylglycerol catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0055035	plastid thylakoid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0060416	response to growth hormone	IEP	Predict GO terms from Neighborhoods
BP	GO:0061572	actin filament bundle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0062012	regulation of small molecule metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0062091	Ycf2/FtsHi complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0070938	contractile ring	IEP	Predict GO terms from Neighborhoods
BP	GO:0071318	cellular response to ATP	IEP	Predict GO terms from Neighborhoods
BP	GO:0071493	cellular response to UV-B	IEP	Predict GO terms from Neighborhoods
BP	GO:0080093	regulation of photorespiration	IEP	Predict GO terms from Neighborhoods
MF	GO:0098519	obsolete nucleotide phosphatase activity, acting on free nucleotides	IEP	Predict GO terms from Neighborhoods
BP	GO:1901881	positive regulation of protein depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:1902905	positive regulation of supramolecular fiber organization	IEP	Predict GO terms from Neighborhoods
CC	GO:1904949	ATPase complex	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	87	130

External Links

No external refs found!

SOLTUB.AGRIA.G00000003409

Expression Profile

Co-expression Networks

Functional Annotation