SOLTUB.AGRIA.G00000003415

Description : Flap endonuclease GEN-like 1

Gene families : OG_02_0007645 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000003415
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_197

Type	GO Term	Name	Evidence	Source
CC	GO:0000109	nucleotide-excision repair complex	IEA	AHRD
MF	GO:0000217	DNA secondary structure binding	None	Extended
MF	GO:0000405	bubble DNA binding	IEA	AHRD
BP	GO:0000724	double-strand break repair via homologous recombination	IEA	AHRD
BP	GO:0000725	recombinational repair	None	Extended
MF	GO:0000993	RNA polymerase II complex binding	IEA	AHRD
MF	GO:0001098	basal transcription machinery binding	None	Extended
MF	GO:0001099	basal RNA polymerase II transcription machinery binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003684	damaged DNA binding	IEA	AHRD
MF	GO:0003690	double-stranded DNA binding	IEA	AHRD
MF	GO:0003697	single-stranded DNA binding	IEA	AHRD
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004520	endodeoxyribonuclease activity	None	Extended
MF	GO:0004527	exonuclease activity	None	Extended
MF	GO:0004529	exodeoxyribonuclease activity	None	Extended
MF	GO:0004536	deoxyribonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005662	DNA replication factor A complex	IEA	AHRD
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006283	transcription-coupled nucleotide-excision repair	IEA	AHRD
BP	GO:0006285	base-excision repair, AP site formation	IEA	AHRD
BP	GO:0006289	nucleotide-excision repair	None	Extended
BP	GO:0006295	nucleotide-excision repair, DNA incision, 3'-to lesion	IEA	AHRD
BP	GO:0006302	double-strand break repair	None	Extended
BP	GO:0006310	DNA recombination	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
MF	GO:0008047	enzyme activator activity	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008340	determination of adult lifespan	IEA	AHRD
MF	GO:0008821	crossover junction endodeoxyribonuclease activity	IEA	AHRD
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009408	response to heat	IEA	AHRD
BP	GO:0009411	response to UV	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009555	pollen development	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009650	UV protection	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010213	non-photoreactive DNA repair	IEA	AHRD
BP	GO:0010225	response to UV-C	IEA	AHRD
BP	GO:0010941	regulation of cell death	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016796	exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0016888	endodeoxyribonuclease activity, producing 5'-phosphomonoesters	None	Extended
MF	GO:0016889	endodeoxyribonuclease activity, producing 3'-phosphomonoesters	None	Extended
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0016894	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters	None	Extended
MF	GO:0016895	exodeoxyribonuclease activity, producing 5'-phosphomonoesters	IEA	AHRD
MF	GO:0017108	5'-flap endonuclease activity	IEA	AHRD
BP	GO:0019439	aromatic compound catabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0033683	nucleotide-excision repair, DNA incision	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034655	nucleobase-containing compound catabolic process	IEA	AHRD
BP	GO:0035264	multicellular organism growth	IEA	AHRD
BP	GO:0040007	growth	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IEA	AHRD
BP	GO:0042981	regulation of apoptotic process	None	Extended
BP	GO:0043066	negative regulation of apoptotic process	IEA	AHRD
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043069	negative regulation of programmed cell death	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
MF	GO:0043175	RNA polymerase core enzyme binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	IEA	AHRD
BP	GO:0044270	cellular nitrogen compound catabolic process	None	Extended
MF	GO:0044877	protein-containing complex binding	IEA	AHRD
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046700	heterocycle catabolic process	None	Extended
MF	GO:0046983	protein dimerization activity	None	Extended
MF	GO:0047485	protein N-terminus binding	IEA	AHRD
BP	GO:0048229	gametophyte development	None	Extended
MF	GO:0048256	flap endonuclease activity	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	IEA	AHRD
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060548	negative regulation of cell death	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
MF	GO:0070063	RNA polymerase binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901361	organic cyclic compound catabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000112	nucleotide-excision repair factor 3 complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000132	establishment of mitotic spindle orientation	IEP	Predict GO terms from Neighborhoods
CC	GO:0000145	exocyst	IEP	Predict GO terms from Neighborhoods
CC	GO:0000151	ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000160	phosphorelay signal transduction system	IEP	Predict GO terms from Neighborhoods
BP	GO:0000270	peptidoglycan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0000290	deadenylation-dependent decapping of nuclear-transcribed mRNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0000291	nuclear-transcribed mRNA catabolic process, exonucleolytic	IEP	Predict GO terms from Neighborhoods
CC	GO:0000438	core TFIIH complex portion of holo TFIIH complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000439	transcription factor TFIIH core complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000740	nuclear membrane fusion	IEP	Predict GO terms from Neighborhoods
CC	GO:0000935	division septum	IEP	Predict GO terms from Neighborhoods
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0001667	ameboidal-type cell migration	IEP	Predict GO terms from Neighborhoods
MF	GO:0001671	ATPase activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0001919	regulation of receptor recycling	IEP	Predict GO terms from Neighborhoods
BP	GO:0002031	G protein-coupled receptor internalization	IEP	Predict GO terms from Neighborhoods
BP	GO:0002183	cytoplasmic translational initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002761	regulation of myeloid leukocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002762	negative regulation of myeloid leukocyte differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0004180	carboxypeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004181	metallocarboxypeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004532	exoribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004534	5'-3' exoribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005113	patched binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005669	transcription factor TFIID complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005740	mitochondrial envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0005769	early endosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005815	microtubule organizing center	IEP	Predict GO terms from Neighborhoods
CC	GO:0005818	aster	IEP	Predict GO terms from Neighborhoods
CC	GO:0005851	eukaryotic translation initiation factor 2B complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005925	focal adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0006110	regulation of glycolytic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006355	regulation of DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Predict GO terms from Neighborhoods
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEP	Predict GO terms from Neighborhoods
BP	GO:0006369	termination of RNA polymerase II transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0006401	RNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006402	mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006457	protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006508	proteolysis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006836	neurotransmitter transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006897	endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0007021	tubulin complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0007043	cell-cell junction assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0007098	centrosome cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0007269	neurotransmitter secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0007349	cellularization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007391	dorsal closure	IEP	Predict GO terms from Neighborhoods
BP	GO:0007427	epithelial cell migration, open tracheal system	IEP	Predict GO terms from Neighborhoods
BP	GO:0007494	midgut development	IEP	Predict GO terms from Neighborhoods
BP	GO:0007530	sex determination	IEP	Predict GO terms from Neighborhoods
BP	GO:0007569	obsolete cell aging	IEP	Predict GO terms from Neighborhoods
MF	GO:0008235	metalloexopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008258	head involution	IEP	Predict GO terms from Neighborhoods
BP	GO:0008334	histone mRNA metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008409	5'-3' exonuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009558	embryo sac cellularization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009734	auxin-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009792	embryo development ending in birth or egg hatching	IEP	Predict GO terms from Neighborhoods
BP	GO:0009873	ethylene-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009889	regulation of biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009893	positive regulation of metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010001	glial cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010072	primary shoot apical meristem specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0010198	synergid death	IEP	Predict GO terms from Neighborhoods
BP	GO:0010289	homogalacturonan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010394	homogalacturonan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010413	glucuronoxylan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010468	regulation of gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0010498	proteasomal protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0010631	epithelial cell migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0010638	positive regulation of organelle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010810	regulation of cell-substrate adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010811	positive regulation of cell-substrate adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0015695	organic cation transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015870	acetylcholine transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016071	mRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016192	vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0016251	RNA polymerase II general transcription initiation factor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0016328	lateral plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0016331	morphogenesis of embryonic epithelium	IEP	Predict GO terms from Neighborhoods
CC	GO:0016442	RISC complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0016556	mRNA modification	IEP	Predict GO terms from Neighborhoods
CC	GO:0016592	mediator complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0016604	nuclear body	IEP	Predict GO terms from Neighborhoods
CC	GO:0016607	nuclear speck	IEP	Predict GO terms from Neighborhoods
MF	GO:0016896	exoribonuclease activity, producing 5'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
CC	GO:0019005	SCF ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019222	regulation of metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0021782	glial cell development	IEP	Predict GO terms from Neighborhoods
CC	GO:0030055	cell-substrate junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0030155	regulation of cell adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0030163	protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030237	female sex determination	IEP	Predict GO terms from Neighborhoods
CC	GO:0030428	cell septum	IEP	Predict GO terms from Neighborhoods
CC	GO:0030496	midbody	IEP	Predict GO terms from Neighborhoods
MF	GO:0030515	snoRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0030540	female genitalia development	IEP	Predict GO terms from Neighborhoods
MF	GO:0030695	GTPase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030852	regulation of granulocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0030853	negative regulation of granulocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031087	deadenylation-independent decapping of nuclear-transcribed mRNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0031110	regulation of microtubule polymerization or depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031112	positive regulation of microtubule polymerization or depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031113	regulation of microtubule polymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031116	positive regulation of microtubule polymerization	IEP	Predict GO terms from Neighborhoods
MF	GO:0031267	small GTPase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031323	regulation of cellular metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0031332	RNAi effector complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0031410	cytoplasmic vesicle	IEP	Predict GO terms from Neighborhoods
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0031464	Cul4A-RING E3 ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0031514	motile cilium	IEP	Predict GO terms from Neighborhoods
BP	GO:0031623	receptor internalization	IEP	Predict GO terms from Neighborhoods
BP	GO:0032205	negative regulation of telomere maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:0032210	regulation of telomere maintenance via telomerase	IEP	Predict GO terms from Neighborhoods
BP	GO:0032211	negative regulation of telomere maintenance via telomerase	IEP	Predict GO terms from Neighborhoods
BP	GO:0032273	positive regulation of protein polymerization	IEP	Predict GO terms from Neighborhoods
CC	GO:0032391	photoreceptor connecting cilium	IEP	Predict GO terms from Neighborhoods
BP	GO:0032781	positive regulation of ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032940	secretion by cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0033043	regulation of organelle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0033044	regulation of chromosome organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0034260	negative regulation of GTPase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034332	adherens junction organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0034333	adherens junction assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0034499	late endosome to Golgi transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0034663	endoplasmic reticulum chaperone complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0034975	protein folding in endoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
BP	GO:0035019	somatic stem cell population maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:0035212	cell competition in a multicellular organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0035282	segmentation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035556	intracellular signal transduction	IEP	Predict GO terms from Neighborhoods
CC	GO:0035869	ciliary transition zone	IEP	Predict GO terms from Neighborhoods
CC	GO:0036396	RNA N6-methyladenosine methyltransferase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0040001	establishment of mitotic spindle localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0040003	chitin-based cuticle development	IEP	Predict GO terms from Neighborhoods
BP	GO:0042461	photoreceptor cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0042752	regulation of circadian rhythm	IEP	Predict GO terms from Neighborhoods
BP	GO:0043087	regulation of GTPase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043462	regulation of ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043484	regulation of RNA splicing	IEP	Predict GO terms from Neighborhoods
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043633	polyadenylation-dependent RNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044089	positive regulation of cellular component biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0044093	positive regulation of molecular function	IEP	Predict GO terms from Neighborhoods
CC	GO:0045171	intercellular bridge	IEP	Predict GO terms from Neighborhoods
BP	GO:0045196	establishment or maintenance of neuroblast polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045216	cell-cell junction organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0045293	mRNA editing complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0045296	cadherin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0045596	negative regulation of cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045638	negative regulation of myeloid cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045944	positive regulation of transcription by RNA polymerase II	IEP	Predict GO terms from Neighborhoods
BP	GO:0046903	secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0046907	intracellular transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0047262	polygalacturonate 4-alpha-galacturonosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048193	Golgi vesicle transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0048358	mucilage pectin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048468	cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048488	synaptic vesicle endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048518	positive regulation of biological process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048522	positive regulation of cellular process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048565	digestive tract development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048598	embryonic morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048708	astrocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048759	xylem vessel member cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048806	genitalia development	IEP	Predict GO terms from Neighborhoods
MF	GO:0050072	m7G(5')pppN diphosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050839	cell adhesion molecule binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051020	GTPase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051095	regulation of helicase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051096	positive regulation of helicase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051128	regulation of cellular component organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051130	positive regulation of cellular component organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051252	regulation of RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0051285	cell cortex of cell tip	IEP	Predict GO terms from Neighborhoods
BP	GO:0051293	establishment of spindle localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051294	establishment of spindle orientation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051457	maintenance of protein location in nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0051512	positive regulation of unidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0051516	regulation of bipolar cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0051518	positive regulation of bipolar cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0051519	activation of bipolar cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0051523	cell growth mode switching, monopolar to bipolar	IEP	Predict GO terms from Neighborhoods
BP	GO:0051653	spindle localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0060178	regulation of exocyst localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0060260	regulation of transcription initiation by RNA polymerase II	IEP	Predict GO terms from Neighborhoods
BP	GO:0060261	positive regulation of transcription initiation by RNA polymerase II	IEP	Predict GO terms from Neighborhoods
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0061171	establishment of bipolar cell polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:0061389	regulation of direction of cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0061512	protein localization to cilium	IEP	Predict GO terms from Neighborhoods
BP	GO:0070059	intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress	IEP	Predict GO terms from Neighborhoods
MF	GO:0070569	uridylyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070816	phosphorylation of RNA polymerase II C-terminal domain	IEP	Predict GO terms from Neighborhoods
BP	GO:0070830	bicellular tight junction assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0071042	nuclear polyadenylation-dependent mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0071044	histone mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0071047	polyadenylation-dependent mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0071763	nuclear membrane organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0072595	maintenance of protein localization in organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0080009	mRNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0080090	regulation of primary metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090059	protoxylem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0098609	cell-cell adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0099643	signal release from synapse	IEP	Predict GO terms from Neighborhoods
CC	GO:0099738	cell cortex region	IEP	Predict GO terms from Neighborhoods
BP	GO:0110154	RNA decapping	IEP	Predict GO terms from Neighborhoods
BP	GO:0110156	methylguanosine-cap decapping	IEP	Predict GO terms from Neighborhoods
BP	GO:0120192	tight junction assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0120193	tight junction organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0140238	presynaptic endocytosis	IEP	Predict GO terms from Neighborhoods
CC	GO:0140535	intracellular protein-containing complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1900087	positive regulation of G1/S transition of mitotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:1901374	acetate ester transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1901976	regulation of cell cycle checkpoint	IEP	Predict GO terms from Neighborhoods
BP	GO:1902106	negative regulation of leukocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:1902117	positive regulation of organelle assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:1902494	catalytic complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1902808	positive regulation of cell cycle G1/S phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:1903533	regulation of protein targeting	IEP	Predict GO terms from Neighborhoods
BP	GO:1903551	regulation of extracellular exosome assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1903553	positive regulation of extracellular exosome assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1903707	negative regulation of hemopoiesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1903715	regulation of aerobic respiration	IEP	Predict GO terms from Neighborhoods
BP	GO:1904357	negative regulation of telomere maintenance via telomere lengthening	IEP	Predict GO terms from Neighborhoods
BP	GO:1904872	regulation of telomerase RNA localization to Cajal body	IEP	Predict GO terms from Neighborhoods
BP	GO:1905462	regulation of DNA duplex unwinding	IEP	Predict GO terms from Neighborhoods
BP	GO:1905464	positive regulation of DNA duplex unwinding	IEP	Predict GO terms from Neighborhoods
BP	GO:1905774	regulation of DNA helicase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1905776	positive regulation of DNA helicase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1990120	messenger ribonucleoprotein complex assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:1990234	transferase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:2000001	regulation of DNA damage checkpoint	IEP	Predict GO terms from Neighborhoods
BP	GO:2000144	positive regulation of DNA-templated transcription initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000279	negative regulation of DNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000434	regulation of protein neddylation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000436	positive regulation of protein neddylation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000819	regulation of nucleotide-excision repair	IEP	Predict GO terms from Neighborhoods
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR006085	XPG_DNA_repair_N	1	86
IPR029060	PIN-like_dom_sf	6	213
IPR006086	XPG-I_dom	129	213
IPR036279	5-3_exonuclease_C_sf	198	412

External Links

No external refs found!

SOLTUB.AGRIA.G00000003415

Expression Profile

Co-expression Networks

Functional Annotation