SOLTUB.AGRIA.G00000033731

Description : Actin-depolymerizing factor

Gene families : OG_02_0001745 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000033731
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_47

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003779	actin binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005739	mitochondrion	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
CC	GO:0005884	actin filament	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006979	response to oxidative stress	IEA	AHRD
BP	GO:0007015	actin filament organization	None	Extended
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008154	actin polymerization or depolymerization	None	Extended
CC	GO:0009506	plasmodesma	IEA	AHRD
CC	GO:0009507	chloroplast	IEA	AHRD
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009860	pollen tube growth	IEA	AHRD
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0022411	cellular component disassembly	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030042	actin filament depolymerization	IEA	AHRD
CC	GO:0030054	cell junction	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032984	protein-containing complex disassembly	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042742	defense response to bacterium	IEA	AHRD
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
BP	GO:0046686	response to cadmium ion	IEA	AHRD
CC	GO:0048046	apoplast	IEA	AHRD
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0051015	actin filament binding	IEA	AHRD
BP	GO:0051261	protein depolymerization	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0099080	supramolecular complex	None	Extended
CC	GO:0099081	supramolecular polymer	None	Extended
CC	GO:0099512	supramolecular fiber	None	Extended
CC	GO:0099513	polymeric cytoskeletal fiber	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001666	response to hypoxia	IEP	Predict GO terms from Neighborhoods
BP	GO:0001731	formation of translation preinitiation complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0002239	response to oomycetes	IEP	Predict GO terms from Neighborhoods
BP	GO:0002831	regulation of response to biotic stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0003743	translation initiation factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003993	acid phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004650	polygalacturonase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005096	GTPase activator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005179	hormone activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005496	steroid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0005543	phospholipid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0005548	phospholipid transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005618	cell wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0006004	fucose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006450	regulation of translational fidelity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006869	lipid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0007549	dosage compensation	IEP	Predict GO terms from Neighborhoods
MF	GO:0008195	phosphatidate phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008289	lipid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0008354	germ cell migration	IEP	Predict GO terms from Neighborhoods
MF	GO:0008378	galactosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009048	dosage compensation by inactivation of X chromosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0009277	fungal-type cell wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0009638	phototropism	IEP	Predict GO terms from Neighborhoods
BP	GO:0009969	xyloglucan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010256	endomembrane system organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010411	xyloglucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010469	regulation of signaling receptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010726	positive regulation of hydrogen peroxide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0014070	response to organic cyclic compound	IEP	Predict GO terms from Neighborhoods
BP	GO:0015690	aluminum cation transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015914	phospholipid transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0016282	eukaryotic 43S preinitiation complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0019319	hexose biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019863	IgE binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019864	IgG binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019865	immunoglobulin binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0030173	integral component of Golgi membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0030312	external encapsulating structure	IEP	Predict GO terms from Neighborhoods
MF	GO:0030545	signaling receptor regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0030546	signaling receptor activator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0030957	Tat protein binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031228	intrinsic component of Golgi membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0031369	translation initiation factor binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031985	Golgi cisterna	IEP	Predict GO terms from Neighborhoods
MF	GO:0032934	sterol binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0035627	ceramide transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0036293	response to decreased oxygen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0036294	cellular response to decreased oxygen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0042353	fucose biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0042577	lipid phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0043024	ribosomal small subunit binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043547	positive regulation of GTPase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0043614	multi-eIF complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0043667	pollen wall	IEP	Predict GO terms from Neighborhoods
MF	GO:0046624	sphingolipid transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0046625	sphingolipid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0047911	galacturan 1,4-alpha-galacturonidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0048018	receptor ligand activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048868	pollen tube development	IEP	Predict GO terms from Neighborhoods
MF	GO:0070273	phosphatidylinositol-4-phosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0070482	response to oxygen levels	IEP	Predict GO terms from Neighborhoods
CC	GO:0070993	translation preinitiation complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0071453	cellular response to oxygen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0071456	cellular response to hypoxia	IEP	Predict GO terms from Neighborhoods
BP	GO:0071702	organic substance transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0097001	ceramide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0120009	intermembrane lipid transfer	IEP	Predict GO terms from Neighborhoods
MF	GO:0120013	lipid transfer activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0120014	phospholipid transfer activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0120016	sphingolipid transfer activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0120017	ceramide transfer activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140338	sphingomyelin transfer activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1900056	negative regulation of leaf senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:1900424	regulation of defense response to bacterium	IEP	Predict GO terms from Neighborhoods
BP	GO:1900426	positive regulation of defense response to bacterium	IEP	Predict GO terms from Neighborhoods
MF	GO:1902387	ceramide 1-phosphate binding	IEP	Predict GO terms from Neighborhoods
MF	GO:1902388	ceramide 1-phosphate transfer activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1990145	maintenance of translational fidelity	IEP	Predict GO terms from Neighborhoods
BP	GO:2000379	positive regulation of reactive oxygen species metabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002108	ADF-H	14	134

External Links

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SOLTUB.AGRIA.G00000033731

Expression Profile

Co-expression Networks

Functional Annotation