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  5. SOLTUB.AGRIA.G00000033742

SOLTUB.AGRIA.G00000033742


Description : F-box protein


Gene families : OG_02_0000403 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000033742
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_76


Type GO Term Name Evidence Source
CC GO:0110165 cellular anatomical entity IEA AHRD
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Type GO Term Name Evidence Source
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004528 phosphodiesterase I activity IEP Predict GO terms from Neighborhoods
MF GO:0004529 exodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004536 deoxyribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Predict GO terms from Neighborhoods
BP GO:0006284 base-excision repair IEP Predict GO terms from Neighborhoods
BP GO:0006974 cellular response to DNA damage stimulus IEP Predict GO terms from Neighborhoods
MF GO:0008081 phosphoric diester hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Predict GO terms from Neighborhoods
MF GO:0008296 3'-5'-exodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0008309 double-stranded DNA exodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0008311 double-stranded DNA 3'-5' exodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0008408 3'-5' exonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0042578 phosphoric ester hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Predict GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036047 F-box-like_dom_sf 8 73
IPR017451 F-box-assoc_interact_dom 107 334
IPR001810 F-box_dom 10 44
No external refs found!