Description : UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
Gene families : OG_02_0002953 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000034355 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_220 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000083 | regulation of transcription involved in G1/S transition of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000175 | 3'-5'-exoribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000414 | regulation of histone H3-K36 methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000416 | positive regulation of histone H3-K36 methylation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000785 | chromatin | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000794 | condensed nuclear chromosome | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000993 | RNA polymerase II complex binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001098 | basal transcription machinery binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001099 | basal RNA polymerase II transcription machinery binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001833 | inner cell mass cell proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001843 | neural tube closure | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0001917 | photoreceptor inner segment | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0002039 | p53 binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002574 | thrombocyte differentiation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003691 | double-stranded telomeric DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004175 | endopeptidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004532 | exoribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005730 | nucleolus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005925 | focal adhesion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006325 | chromatin organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006334 | nucleosome assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006338 | chromatin remodeling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007029 | endoplasmic reticulum organization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0008024 | cyclin/CDK positive transcription elongation factor complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008353 | RNA polymerase II CTD heptapeptide repeat kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009569 | chloroplast starch grain | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009828 | plant-type cell wall loosening | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009855 | determination of bilateral symmetry | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009856 | pollination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010067 | procambium histogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010072 | primary shoot apical meristem specification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010507 | negative regulation of autophagy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010842 | retina layer formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010971 | positive regulation of G2/M transition of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016796 | exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016896 | exoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0019908 | nuclear cyclin-dependent protein kinase holoenzyme complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030055 | cell-substrate junction | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030660 | Golgi-associated vesicle membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031588 | nucleotide-activated protein kinase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032153 | cell division site | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032541 | cortical endoplasmic reticulum | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032786 | positive regulation of DNA-templated transcription, elongation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032806 | carboxy-terminal domain protein kinase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032968 | positive regulation of transcription elongation by RNA polymerase II | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033619 | membrane protein proteolysis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034211 | GTP-dependent protein kinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034243 | regulation of transcription elongation by RNA polymerase II | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034728 | nucleosome organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035148 | tube formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042126 | nitrate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042128 | nitrate assimilation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042162 | telomeric DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042500 | aspartic endopeptidase activity, intramembrane cleaving | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043036 | starch grain | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043047 | single-stranded telomeric DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043122 | regulation of I-kappaB kinase/NF-kappaB signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043123 | positive regulation of I-kappaB kinase/NF-kappaB signaling | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043175 | RNA polymerase core enzyme binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043388 | positive regulation of DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043922 | negative regulation by host of viral transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043966 | histone H3 acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043983 | histone H4-K12 acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044154 | histone H3-K14 acetylation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0044317 | rod spherule | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0048030 | disaccharide binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048497 | maintenance of floral organ identity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048646 | anatomical structure formation involved in morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050727 | regulation of inflammatory response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051851 | modulation by host of symbiont process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060059 | embryonic retina morphogenesis in camera-type eye | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060606 | tube closure | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070063 | RNA polymerase binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070492 | oligosaccharide binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070577 | lysine-acetylated histone binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071458 | integral component of cytoplasmic side of endoplasmic reticulum membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071556 | integral component of lumenal side of endoplasmic reticulum membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071786 | endoplasmic reticulum tubular network organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071941 | nitrogen cycle metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080060 | integument development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080157 | regulation of plant-type cell wall organization or biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090158 | endoplasmic reticulum membrane organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090421 | embryonic meristem initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090503 | RNA phosphodiester bond hydrolysis, exonucleolytic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090700 | maintenance of plant organ identity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0098847 | sequence-specific single stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0099122 | RNA polymerase II C-terminal domain binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0106140 | P-TEFb complex binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140033 | acetylation-dependent protein binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900034 | regulation of cellular response to heat | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900036 | positive regulation of cellular response to heat | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900056 | negative regulation of leaf senescence | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900871 | chloroplast mRNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901407 | regulation of phosphorylation of RNA polymerase II C-terminal domain | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901976 | regulation of cell cycle checkpoint | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901977 | negative regulation of cell cycle checkpoint | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1901982 | maltose binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902751 | positive regulation of cell cycle G2/M phase transition | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1902911 | protein kinase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990809 | endoplasmic reticulum tubular network membrane organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000001 | regulation of DNA damage checkpoint | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000002 | negative regulation of DNA damage checkpoint | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001021 | negative regulation of response to DNA damage stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001057 | reactive nitrogen species metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001253 | regulation of histone H3-K36 trimethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001255 | positive regulation of histone H3-K36 trimethylation | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |