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  5. SOLTUB.AGRIA.G00000034410

SOLTUB.AGRIA.G00000034410


Description : PttA2 protein, putative


Gene families : OG_02_0000246 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000034410
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_101

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000014498 No alias PttA2 protein, putative 0.07 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000014498 No alias PttA2 protein, putative 0.07 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000014498 No alias PttA2 protein, putative 0.07 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000028 ribosomal small subunit assembly IEP Predict GO terms from Neighborhoods
CC GO:0000427 plastid-encoded plastid RNA polymerase complex IEP Predict GO terms from Neighborhoods
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predict GO terms from Neighborhoods
MF GO:0001216 DNA-binding transcription activator activity IEP Predict GO terms from Neighborhoods
MF GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IEP Predict GO terms from Neighborhoods
BP GO:0001708 cell fate specification IEP Predict GO terms from Neighborhoods
CC GO:0009295 nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0015935 small ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0022627 cytosolic small ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0030880 RNA polymerase complex IEP Predict GO terms from Neighborhoods
CC GO:0042644 chloroplast nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0042646 plastid nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0101031 chaperone complex IEP Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!