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Description : Replication protein a 70 kDa dna-binding subunit b
Gene families : OG_02_0024141 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000034714 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_38 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| SOLTUB.AGRIA.G00000004264 | No alias | Replication protein a 70 kDa dna-binding subunit b | 1.0 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000004264 | No alias | Replication protein a 70 kDa dna-binding subunit b | 1.0 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000004264 | No alias | Replication protein a 70 kDa dna-binding subunit b | 1.0 | Orthogroups with 8 Potato genotypes |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEA | AHRD |
| BP | GO:0000723 | telomere maintenance | None | Extended |
| BP | GO:0000724 | double-strand break repair via homologous recombination | IEA | AHRD |
| BP | GO:0000725 | recombinational repair | None | Extended |
| MF | GO:0003674 | molecular_function | None | Extended |
| MF | GO:0003676 | nucleic acid binding | IEA | AHRD |
| MF | GO:0003677 | DNA binding | IEA | AHRD |
| MF | GO:0003684 | damaged DNA binding | IEA | AHRD |
| MF | GO:0003697 | single-stranded DNA binding | None | Extended |
| MF | GO:0003824 | catalytic activity | None | Extended |
| MF | GO:0004386 | helicase activity | IEA | AHRD |
| MF | GO:0005488 | binding | None | Extended |
| MF | GO:0005524 | ATP binding | IEA | AHRD |
| CC | GO:0005575 | cellular_component | None | Extended |
| CC | GO:0005634 | nucleus | IEA | AHRD |
| CC | GO:0005662 | DNA replication factor A complex | IEA | AHRD |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | None | Extended |
| BP | GO:0006259 | DNA metabolic process | None | Extended |
| BP | GO:0006260 | DNA replication | IEA | AHRD |
| BP | GO:0006268 | DNA unwinding involved in DNA replication | IEA | AHRD |
| BP | GO:0006278 | RNA-templated DNA biosynthetic process | None | Extended |
| BP | GO:0006281 | DNA repair | IEA | AHRD |
| BP | GO:0006289 | nucleotide-excision repair | IEA | AHRD |
| BP | GO:0006302 | double-strand break repair | None | Extended |
| BP | GO:0006310 | DNA recombination | IEA | AHRD |
| BP | GO:0006725 | cellular aromatic compound metabolic process | None | Extended |
| BP | GO:0006807 | nitrogen compound metabolic process | None | Extended |
| BP | GO:0006950 | response to stress | None | Extended |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEA | AHRD |
| BP | GO:0006996 | organelle organization | None | Extended |
| BP | GO:0007004 | telomere maintenance via telomerase | IEA | AHRD |
| BP | GO:0007049 | cell cycle | None | Extended |
| BP | GO:0008150 | biological_process | None | Extended |
| BP | GO:0008152 | metabolic process | None | Extended |
| BP | GO:0009058 | biosynthetic process | None | Extended |
| BP | GO:0009059 | macromolecule biosynthetic process | None | Extended |
| BP | GO:0009314 | response to radiation | None | Extended |
| BP | GO:0009411 | response to UV | None | Extended |
| BP | GO:0009416 | response to light stimulus | None | Extended |
| BP | GO:0009628 | response to abiotic stimulus | None | Extended |
| BP | GO:0009987 | cellular process | None | Extended |
| BP | GO:0010224 | response to UV-B | IEA | AHRD |
| BP | GO:0010833 | telomere maintenance via telomere lengthening | None | Extended |
| BP | GO:0016043 | cellular component organization | None | Extended |
| MF | GO:0016787 | hydrolase activity | IEA | AHRD |
| MF | GO:0017076 | purine nucleotide binding | None | Extended |
| BP | GO:0018130 | heterocycle biosynthetic process | None | Extended |
| BP | GO:0019438 | aromatic compound biosynthetic process | None | Extended |
| BP | GO:0022414 | reproductive process | None | Extended |
| MF | GO:0030554 | adenyl nucleotide binding | None | Extended |
| BP | GO:0032200 | telomere organization | None | Extended |
| BP | GO:0032392 | DNA geometric change | None | Extended |
| BP | GO:0032508 | DNA duplex unwinding | None | Extended |
| MF | GO:0032553 | ribonucleotide binding | None | Extended |
| MF | GO:0032555 | purine ribonucleotide binding | None | Extended |
| MF | GO:0032559 | adenyl ribonucleotide binding | None | Extended |
| CC | GO:0032991 | protein-containing complex | None | Extended |
| BP | GO:0033554 | cellular response to stress | None | Extended |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | None | Extended |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | None | Extended |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | None | Extended |
| MF | GO:0036094 | small molecule binding | None | Extended |
| MF | GO:0042162 | telomeric DNA binding | None | Extended |
| MF | GO:0043047 | single-stranded telomeric DNA binding | IEA | AHRD |
| MF | GO:0043167 | ion binding | None | Extended |
| MF | GO:0043168 | anion binding | None | Extended |
| MF | GO:0043169 | cation binding | None | Extended |
| BP | GO:0043170 | macromolecule metabolic process | None | Extended |
| CC | GO:0043226 | organelle | None | Extended |
| CC | GO:0043227 | membrane-bounded organelle | None | Extended |
| CC | GO:0043229 | intracellular organelle | None | Extended |
| CC | GO:0043231 | intracellular membrane-bounded organelle | None | Extended |
| MF | GO:0043565 | sequence-specific DNA binding | None | Extended |
| BP | GO:0044237 | cellular metabolic process | None | Extended |
| BP | GO:0044238 | primary metabolic process | None | Extended |
| BP | GO:0044249 | cellular biosynthetic process | None | Extended |
| BP | GO:0044260 | cellular macromolecule metabolic process | None | Extended |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | None | Extended |
| BP | GO:0046483 | heterocycle metabolic process | None | Extended |
| MF | GO:0046872 | metal ion binding | IEA | AHRD |
| BP | GO:0050896 | response to stimulus | None | Extended |
| BP | GO:0051276 | chromosome organization | None | Extended |
| BP | GO:0051321 | meiotic cell cycle | IEA | AHRD |
| BP | GO:0051716 | cellular response to stimulus | None | Extended |
| BP | GO:0071103 | DNA conformation change | None | Extended |
| BP | GO:0071704 | organic substance metabolic process | None | Extended |
| BP | GO:0071840 | cellular component organization or biogenesis | None | Extended |
| BP | GO:0071897 | DNA biosynthetic process | None | Extended |
| BP | GO:0090304 | nucleic acid metabolic process | None | Extended |
| MF | GO:0097159 | organic cyclic compound binding | None | Extended |
| MF | GO:0097367 | carbohydrate derivative binding | None | Extended |
| MF | GO:0098847 | sequence-specific single stranded DNA binding | None | Extended |
| CC | GO:0110165 | cellular anatomical entity | None | Extended |
| CC | GO:0140513 | nuclear protein-containing complex | None | Extended |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | None | Extended |
| MF | GO:0140657 | ATP-dependent activity | None | Extended |
| MF | GO:1901265 | nucleoside phosphate binding | None | Extended |
| BP | GO:1901360 | organic cyclic compound metabolic process | None | Extended |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | None | Extended |
| MF | GO:1901363 | heterocyclic compound binding | None | Extended |
| BP | GO:1901576 | organic substance biosynthetic process | None | Extended |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR012340 | NA-bd_OB-fold | 3 | 111 |
| No external refs found! |
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