Coexpression cluster: Cluster_38 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043531 ADP binding 13.51% (10/74) 4.59 0.0 0.0
GO:0080145 cysteine homeostasis 5.41% (4/74) 8.04 0.0 0.0
GO:0080146 L-cysteine desulfhydrase activity 5.41% (4/74) 7.59 0.0 1e-06
GO:0008219 cell death 17.57% (13/74) 2.83 0.0 4e-06
GO:0009626 plant-type hypersensitive response 13.51% (10/74) 3.44 0.0 5e-06
GO:0034050 programmed cell death induced by symbiont 13.51% (10/74) 3.44 0.0 5e-06
GO:0051702 biological process involved in interaction with symbiont 13.51% (10/74) 3.24 0.0 8e-06
GO:0004124 cysteine synthase activity 5.41% (4/74) 6.52 0.0 9e-06
GO:0019499 cyanide metabolic process 5.41% (4/74) 6.52 0.0 9e-06
GO:0050017 L-3-cyanoalanine synthase activity 5.41% (4/74) 6.52 0.0 9e-06
GO:0006535 cysteine biosynthetic process from serine 5.41% (4/74) 6.34 0.0 1.2e-05
GO:0044540 L-cystine L-cysteine-lyase (deaminating) 4.05% (3/74) 7.63 0.0 2.4e-05
GO:0047458 beta-pyrazolylalanine synthase activity 4.05% (3/74) 7.46 1e-06 2.7e-05
GO:0050234 pyrazolylalanine synthase activity 4.05% (3/74) 7.46 1e-06 2.7e-05
GO:0050461 L-mimosine synthase activity 4.05% (3/74) 7.46 1e-06 2.7e-05
GO:0045087 innate immune response 16.22% (12/74) 2.63 0.0 2.9e-05
GO:1990170 stress response to cadmium ion 5.41% (4/74) 5.88 1e-06 3.1e-05
GO:0006955 immune response 16.22% (12/74) 2.51 1e-06 5e-05
GO:0019344 cysteine biosynthetic process 5.41% (4/74) 5.62 1e-06 5.7e-05
GO:0004123 cystathionine gamma-lyase activity 4.05% (3/74) 6.93 2e-06 7.2e-05
GO:0012501 programmed cell death 13.51% (10/74) 2.69 3e-06 0.000118
GO:0006534 cysteine metabolic process 5.41% (4/74) 5.32 3e-06 0.00012
GO:0080144 amino acid homeostasis 5.41% (4/74) 5.21 4e-06 0.000147
GO:0006563 L-serine metabolic process 5.41% (4/74) 5.16 5e-06 0.000162
GO:0044403 biological process involved in symbiotic interaction 13.51% (10/74) 2.58 7e-06 0.000207
GO:0097501 stress response to metal ion 5.41% (4/74) 4.82 1.3e-05 0.000363
GO:0009509 chromoplast 4.05% (3/74) 6.04 1.3e-05 0.000372
GO:0036094 small molecule binding 29.73% (22/74) 1.41 1.3e-05 0.000381
GO:0000097 sulfur amino acid biosynthetic process 5.41% (4/74) 4.71 1.8e-05 0.000476
GO:0009070 serine family amino acid biosynthetic process 5.41% (4/74) 4.67 1.9e-05 0.000507
GO:0016846 carbon-sulfur lyase activity 5.41% (4/74) 4.48 3.3e-05 0.000835
GO:0034002 (R)-limonene synthase activity 2.7% (2/74) 7.46 5.3e-05 0.001148
GO:0050550 pinene synthase activity 2.7% (2/74) 7.46 5.3e-05 0.001148
GO:0050552 (4S)-limonene synthase activity 2.7% (2/74) 7.46 5.3e-05 0.001148
GO:0080015 sabinene synthase activity 2.7% (2/74) 7.46 5.3e-05 0.001148
GO:0000096 sulfur amino acid metabolic process 5.41% (4/74) 4.29 5.5e-05 0.001156
GO:0009069 serine family amino acid metabolic process 5.41% (4/74) 4.25 6.1e-05 0.001253
GO:0009567 double fertilization forming a zygote and endosperm 5.41% (4/74) 4.3 5.3e-05 0.001289
GO:0034768 (E)-beta-ocimene synthase activity 2.7% (2/74) 7.24 7.4e-05 0.001409
GO:1901938 (-)-exo-alpha-bergamotene metabolic process 2.7% (2/74) 7.24 7.4e-05 0.001409
GO:1901940 (-)-exo-alpha-bergamotene biosynthetic process 2.7% (2/74) 7.24 7.4e-05 0.001409
GO:0050551 myrcene synthase activity 2.7% (2/74) 6.88 0.000126 0.002196
GO:0019756 cyanogenic glycoside biosynthetic process 2.7% (2/74) 6.88 0.000126 0.002196
GO:0042341 cyanogenic glycoside metabolic process 2.7% (2/74) 6.88 0.000126 0.002196
GO:0043168 anion binding 22.97% (17/74) 1.44 0.000119 0.002213
GO:0002376 immune system process 16.22% (12/74) 1.81 0.000143 0.002433
GO:0009566 fertilization 5.41% (4/74) 3.89 0.000162 0.002699
GO:0030170 pyridoxal phosphate binding 5.41% (4/74) 3.71 0.000261 0.004257
GO:0070279 vitamin B6 binding 5.41% (4/74) 3.7 0.000267 0.004269
GO:0009570 chloroplast stroma 10.81% (8/74) 2.24 0.000295 0.004624
GO:0006569 tryptophan catabolic process 2.7% (2/74) 6.24 0.000317 0.004774
GO:0080028 nitrile biosynthetic process 2.7% (2/74) 6.24 0.000317 0.004774
GO:0050898 nitrile metabolic process 2.7% (2/74) 6.14 0.000365 0.005398
GO:0016835 carbon-oxygen lyase activity 6.76% (5/74) 3.03 0.000383 0.005449
GO:0009532 plastid stroma 10.81% (8/74) 2.18 0.000378 0.005485
GO:0044272 sulfur compound biosynthetic process 8.11% (6/74) 2.64 0.000419 0.005862
GO:0055081 anion homeostasis 5.41% (4/74) 3.48 0.000477 0.006554
GO:0006952 defense response 28.38% (21/74) 1.07 0.000592 0.007992
GO:0006520 cellular amino acid metabolic process 9.46% (7/74) 2.27 0.000638 0.008461
GO:0032559 adenyl ribonucleotide binding 16.22% (12/74) 1.56 0.000695 0.008915
GO:1901605 alpha-amino acid metabolic process 8.11% (6/74) 2.5 0.000684 0.008927
GO:0030554 adenyl nucleotide binding 16.22% (12/74) 1.55 0.000726 0.009172
GO:0043692 monoterpene metabolic process 2.7% (2/74) 5.59 0.000797 0.00975
GO:0043693 monoterpene biosynthetic process 2.7% (2/74) 5.59 0.000797 0.00975
GO:0051707 response to other organism 29.73% (22/74) 0.99 0.000906 0.010908
GO:0098542 defense response to other organism 24.32% (18/74) 1.13 0.001042 0.01149
GO:0019842 vitamin binding 5.41% (4/74) 3.17 0.001037 0.011604
GO:0006289 nucleotide-excision repair 4.05% (3/74) 3.93 0.001034 0.011734
GO:0000166 nucleotide binding 22.97% (17/74) 1.18 0.001005 0.011744
GO:1901265 nucleoside phosphate binding 22.97% (17/74) 1.18 0.001005 0.011744
GO:0008652 cellular amino acid biosynthetic process 6.76% (5/74) 2.71 0.001022 0.011764
GO:0007004 telomere maintenance via telomerase 2.7% (2/74) 5.29 0.001204 0.013089
GO:0046394 carboxylic acid biosynthetic process 10.81% (8/74) 1.9 0.001343 0.013835
GO:0044419 biological process involved in interspecies interaction between organisms 29.73% (22/74) 0.95 0.001328 0.013866
GO:0033554 cellular response to stress 21.62% (16/74) 1.19 0.001314 0.013903
GO:0005662 DNA replication factor A complex 2.7% (2/74) 5.19 0.001389 0.013941
GO:0006278 RNA-templated DNA biosynthetic process 2.7% (2/74) 5.19 0.001389 0.013941
GO:0005524 ATP binding 14.86% (11/74) 1.54 0.001303 0.013975
GO:0010833 telomere maintenance via telomere lengthening 2.7% (2/74) 5.14 0.001486 0.014729
GO:0043207 response to external biotic stimulus 29.73% (22/74) 0.89 0.002255 0.022069
GO:0032555 purine ribonucleotide binding 16.22% (12/74) 1.35 0.002306 0.022287
GO:0042436 indole-containing compound catabolic process 2.7% (2/74) 4.8 0.002378 0.02271
GO:0043047 single-stranded telomeric DNA binding 2.7% (2/74) 4.76 0.002504 0.022796
GO:0098847 sequence-specific single stranded DNA binding 2.7% (2/74) 4.76 0.002504 0.022796
GO:0017076 purine nucleotide binding 16.22% (12/74) 1.34 0.002432 0.022938
GO:0016053 organic acid biosynthetic process 10.81% (8/74) 1.76 0.002492 0.023229
GO:0051276 chromosome organization 6.76% (5/74) 2.39 0.002712 0.024404
GO:0009607 response to biotic stimulus 29.73% (22/74) 0.87 0.002796 0.024875
GO:0032553 ribonucleotide binding 16.22% (12/74) 1.31 0.00289 0.025424
GO:0006268 DNA unwinding involved in DNA replication 2.7% (2/74) 4.62 0.003036 0.026416
GO:0016836 hydro-lyase activity 4.05% (3/74) 3.36 0.003168 0.027258
GO:0045339 farnesyl diphosphate catabolic process 2.7% (2/74) 4.52 0.003467 0.029511
GO:0007443 Malpighian tubule morphogenesis 1.35% (1/74) 8.04 0.003783 0.031178
GO:0007510 cardioblast cell fate determination 1.35% (1/74) 8.04 0.003783 0.031178
GO:0060913 cardiac cell fate determination 1.35% (1/74) 8.04 0.003783 0.031178
GO:0035639 purine ribonucleoside triphosphate binding 14.86% (11/74) 1.34 0.00387 0.031565
GO:0009836 fruit ripening, climacteric 2.7% (2/74) 4.4 0.004084 0.032966
GO:1901607 alpha-amino acid biosynthetic process 5.41% (4/74) 2.61 0.004223 0.033745
GO:0097367 carbohydrate derivative binding 16.22% (12/74) 1.23 0.004542 0.035923
GO:0043167 ion binding 31.08% (23/74) 0.78 0.004911 0.038455
GO:0004400 histidinol-phosphate transaminase activity 1.35% (1/74) 7.46 0.005669 0.039281
GO:0000742 karyogamy involved in conjugation with cellular fusion 1.35% (1/74) 7.46 0.005669 0.039281
GO:0000743 nuclear migration involved in conjugation with cellular fusion 1.35% (1/74) 7.46 0.005669 0.039281
GO:0071989 establishment of protein localization to spindle pole body 1.35% (1/74) 7.46 0.005669 0.039281
GO:1990852 protein transport along microtubule to spindle pole body 1.35% (1/74) 7.46 0.005669 0.039281
GO:1990976 protein transport along microtubule to mitotic spindle pole body 1.35% (1/74) 7.46 0.005669 0.039281
GO:0061333 renal tubule morphogenesis 1.35% (1/74) 7.46 0.005669 0.039281
GO:0009700 indole phytoalexin biosynthetic process 2.7% (2/74) 4.19 0.005457 0.041087
GO:0010120 camalexin biosynthetic process 2.7% (2/74) 4.19 0.005457 0.041087
GO:0046217 indole phytoalexin metabolic process 2.7% (2/74) 4.19 0.005457 0.041087
GO:0052317 camalexin metabolic process 2.7% (2/74) 4.19 0.005457 0.041087
GO:0009074 aromatic amino acid family catabolic process 2.7% (2/74) 4.11 0.00602 0.041345
GO:0033383 geranyl diphosphate metabolic process 2.7% (2/74) 4.16 0.005642 0.041676
GO:0016829 lyase activity 8.11% (6/74) 1.89 0.005623 0.04193
GO:0042162 telomeric DNA binding 2.7% (2/74) 4.07 0.006409 0.043634
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups 5.41% (4/74) 2.4 0.00714 0.048197
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_40 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_54 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_55 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_58 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_59 0.026 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_66 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_67 0.015 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_70 0.032 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_76 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_79 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_85 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_99 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_104 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_106 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_114 0.017 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_116 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_131 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_132 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_144 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_149 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_167 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_175 0.018 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_182 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_185 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_189 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_190 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_201 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_225 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_236 0.027 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_251 0.019 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_266 0.019 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_298 0.013 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_321 0.017 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_323 0.016 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_345 0.017 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_8 0.015 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_9 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_10 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_15 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_16 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_17 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_21 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_24 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_33 0.014 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_35 0.016 Orthogroups with 8 Potato genotypes Compare
Sequences (74) (download table)

InterPro Domains

GO Terms

Family Terms