SOLTUB.AGRIA.G00000035002

Description : Ataxin-3-like protein

Gene families : OG_02_0021044 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000035002
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_209

Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	None	Extended
MF	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IEA	AHRD
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004407	histone deacetylase activity	IEA	AHRD
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005759	mitochondrial matrix	IEA	AHRD
BP	GO:0006476	protein deacetylation	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	IEA	AHRD
BP	GO:0007610	behavior	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	None	Extended
BP	GO:0010810	regulation of cell-substrate adhesion	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0016234	inclusion body	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016575	histone deacetylation	None	Extended
BP	GO:0016579	protein deubiquitination	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	None	Extended
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	None	Extended
MF	GO:0019213	deacetylase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0030155	regulation of cell adhesion	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
MF	GO:0031625	ubiquitin protein ligase binding	IEA	AHRD
CC	GO:0031966	mitochondrial membrane	IEA	AHRD
CC	GO:0031974	membrane-enclosed lumen	None	Extended
CC	GO:0031981	nuclear lumen	IEA	AHRD
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
MF	GO:0033558	protein lysine deacetylase activity	None	Extended
BP	GO:0034605	cellular response to heat	IEA	AHRD
BP	GO:0035520	monoubiquitinated protein deubiquitination	IEA	AHRD
BP	GO:0035601	protein deacylation	None	Extended
BP	GO:0035640	exploration behavior	IEA	AHRD
BP	GO:0035966	response to topologically incorrect protein	None	Extended
BP	GO:0035967	cellular response to topologically incorrect protein	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0042405	nuclear inclusion body	IEA	AHRD
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEA	AHRD
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043233	organelle lumen	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
MF	GO:0044389	ubiquitin-like protein ligase binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0051788	response to misfolded protein	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070013	intracellular organelle lumen	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0070932	histone H3 deacetylation	IEA	AHRD
BP	GO:0071218	cellular response to misfolded protein	IEA	AHRD
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0098732	macromolecule deacylation	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000209	protein polyubiquitination	IEP	Predict GO terms from Neighborhoods
CC	GO:0000329	fungal-type vacuole membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0000724	double-strand break repair via homologous recombination	IEP	Predict GO terms from Neighborhoods
BP	GO:0000725	recombinational repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0000729	DNA double-strand break processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0001650	fibrillar center	IEP	Predict GO terms from Neighborhoods
BP	GO:0001959	regulation of cytokine-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0001961	positive regulation of cytokine-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0002253	activation of immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0002429	immune response-activating cell surface receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0002684	positive regulation of immune system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002757	immune response-activating signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0002764	immune response-regulating signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0002768	immune response-regulating cell surface receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005506	iron ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006281	DNA repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0006282	regulation of DNA repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0006301	postreplication repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0006302	double-strand break repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0006310	DNA recombination	IEP	Predict GO terms from Neighborhoods
BP	GO:0006605	protein targeting	IEP	Predict GO terms from Neighborhoods
BP	GO:0006612	protein targeting to membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0006623	protein targeting to vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0006886	intracellular protein transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0007034	vacuolar transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0007166	cell surface receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0007346	regulation of mitotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0007412	axon target recognition	IEP	Predict GO terms from Neighborhoods
BP	GO:0007416	synapse assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0007528	neuromuscular junction development	IEP	Predict GO terms from Neighborhoods
BP	GO:0007625	grooming behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0007626	locomotory behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0007629	flight behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0007630	jump response	IEP	Predict GO terms from Neighborhoods
BP	GO:0008344	adult locomotory behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0008594	photoreceptor cell morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009411	response to UV	IEP	Predict GO terms from Neighborhoods
BP	GO:0009794	regulation of mitotic cell cycle, embryonic	IEP	Predict GO terms from Neighborhoods
BP	GO:0009960	endosperm development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010039	response to iron ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010053	root epidermal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010803	regulation of tumor necrosis factor-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010942	positive regulation of cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0010994	free ubiquitin chain polymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0016874	ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0021700	developmental maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0022607	cellular component assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0030534	adult behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0031056	regulation of histone modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0031058	positive regulation of histone modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0031371	ubiquitin conjugating enzyme complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0031372	UBC13-MMS2 complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0031396	regulation of protein ubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0031398	positive regulation of protein ubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0031401	positive regulation of protein modification process	IEP	Predict GO terms from Neighborhoods
MF	GO:0031624	ubiquitin conjugating enzyme binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0032182	ubiquitin-like protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032872	regulation of stress-activated MAPK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0032874	positive regulation of stress-activated MAPK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0032880	regulation of protein localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0033182	regulation of histone ubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0033365	protein localization to organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0034329	cell junction assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0034330	cell junction organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0034644	cellular response to UV	IEP	Predict GO terms from Neighborhoods
CC	GO:0035370	UBC13-UEV1A complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0043085	positive regulation of catalytic activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043122	regulation of I-kappaB kinase/NF-kappaB signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling	IEP	Predict GO terms from Neighborhoods
MF	GO:0043130	ubiquitin binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043167	ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043408	regulation of MAPK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0043410	positive regulation of MAPK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0044093	positive regulation of molecular function	IEP	Predict GO terms from Neighborhoods
MF	GO:0044390	ubiquitin-like protein conjugating enzyme binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0044395	protein targeting to vacuolar membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0045739	positive regulation of DNA repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0045787	positive regulation of cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0045931	positive regulation of mitotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0045977	positive regulation of mitotic cell cycle, embryonic	IEP	Predict GO terms from Neighborhoods
BP	GO:0046328	regulation of JNK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0046330	positive regulation of JNK cascade	IEP	Predict GO terms from Neighborhoods
CC	GO:0048471	perinuclear region of cytoplasm	IEP	Predict GO terms from Neighborhoods
BP	GO:0048667	cell morphogenesis involved in neuron differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050778	positive regulation of immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0050808	synapse organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0050851	antigen receptor-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0050852	T cell receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0051052	regulation of DNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051054	positive regulation of DNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051090	regulation of DNA-binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051091	positive regulation of DNA-binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051092	positive regulation of NF-kappaB transcription factor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051124	synaptic assembly at neuromuscular junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0051258	protein polymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051338	regulation of transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051347	positive regulation of transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051438	regulation of ubiquitin-protein transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051443	positive regulation of ubiquitin-protein transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0051536	iron-sulfur cluster binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051540	metal cluster binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051604	protein maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051668	localization within membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0060074	synapse maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0060341	regulation of cellular localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0060759	regulation of response to cytokine stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0060760	positive regulation of response to cytokine stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0061057	peptidoglycan recognition protein signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0061631	ubiquitin conjugating enzyme activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0061650	ubiquitin-like protein conjugating enzyme activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070302	regulation of stress-activated protein kinase signaling cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0070304	positive regulation of stress-activated protein kinase signaling cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0070534	protein K63-linked ubiquitination	IEP	Predict GO terms from Neighborhoods
MF	GO:0070628	proteasome binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0070914	UV-damage excision repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0071478	cellular response to radiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0071482	cellular response to light stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0072347	response to anesthetic	IEP	Predict GO terms from Neighborhoods
BP	GO:0072594	establishment of protein localization to organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0072657	protein localization to membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0072665	protein localization to vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0072666	establishment of protein localization to vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0080135	regulation of cellular response to stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0090150	establishment of protein localization to membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0090627	plant epidermal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0097428	protein maturation by iron-sulfur cluster transfer	IEP	Predict GO terms from Neighborhoods
CC	GO:0098852	lytic vacuole membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0106035	protein maturation by [4Fe-4S] cluster transfer	IEP	Predict GO terms from Neighborhoods
BP	GO:0120113	cytoplasm to vacuole transport by the NVT pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1902533	positive regulation of intracellular signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:1903265	positive regulation of tumor necrosis factor-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1903320	regulation of protein modification by small protein conjugation or removal	IEP	Predict GO terms from Neighborhoods
BP	GO:1903322	positive regulation of protein modification by small protein conjugation or removal	IEP	Predict GO terms from Neighborhoods
BP	GO:1903778	protein localization to vacuolar membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:2000008	regulation of protein localization to cell surface	IEP	Predict GO terms from Neighborhoods
BP	GO:2001020	regulation of response to DNA damage stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:2001022	positive regulation of response to DNA damage stimulus	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR006155	Josephin	15	166

External Links

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SOLTUB.AGRIA.G00000035002

Expression Profile

Co-expression Networks

Functional Annotation