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  5. SOLTUB.AGRIA.G00000035540

SOLTUB.AGRIA.G00000035540


Description : Ovate protein family, C-terminal


Gene families : OG_02_0000420 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000035540
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_55


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004521 endoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004540 ribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0007399 nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0009615 response to virus IEP Predict GO terms from Neighborhoods
BP GO:0009616 RNAi-mediated antiviral immune response IEP Predict GO terms from Neighborhoods
BP GO:0016441 post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
BP GO:0022618 ribonucleoprotein complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0030422 siRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0031047 gene silencing by RNA IEP Predict GO terms from Neighborhoods
CC GO:0031981 nuclear lumen IEP Predict GO terms from Neighborhoods
BP GO:0035194 post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0035196 miRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0051607 defense response to virus IEP Predict GO terms from Neighborhoods
BP GO:0070918 small regulatory ncRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predict GO terms from Neighborhoods
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0140546 defense response to symbiont IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006458 Ovate_C 164 213
No external refs found!