Description : Restriction endonuclease, type II-like superfamily protein
Gene families : OG_02_0010963 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000035641 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_27 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000177 | cytoplasmic exosome (RNase complex) | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000178 | exosome (RNase complex) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000278 | mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000373 | Group II intron splicing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000959 | mitochondrial RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000966 | RNA 5'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000967 | rRNA 5'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001824 | blastocyst development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003725 | double-stranded RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003727 | single-stranded RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003729 | mRNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003730 | mRNA 3'-UTR binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004518 | nuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004519 | endonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004521 | endoribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004525 | ribonuclease III activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004540 | ribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004831 | tyrosine-tRNA ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005739 | mitochondrion | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005971 | ribonucleoside-diphosphate reductase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006206 | pyrimidine nucleobase metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006397 | mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006399 | tRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006401 | RNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006417 | regulation of translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006437 | tyrosyl-tRNA aminoacylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006919 | activation of cysteine-type endopeptidase activity involved in apoptotic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007275 | multicellular organism development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008187 | poly-pyrimidine tract binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008199 | ferric iron binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008219 | cell death | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008266 | poly(U) RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008312 | 7S RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008995 | ribonuclease E activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008996 | ribonuclease G activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009112 | nucleobase metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009138 | pyrimidine nucleoside diphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009295 | nucleoid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009507 | chloroplast | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009532 | plastid stroma | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009534 | chloroplast thylakoid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009536 | plastid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009570 | chloroplast stroma | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009657 | plastid organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009658 | chloroplast organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009790 | embryo development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009793 | embryo development ending in seed dormancy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009894 | regulation of catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009895 | negative regulation of catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010239 | chloroplast mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010343 | singlet oxygen-mediated programmed cell death | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010468 | regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0010494 | cytoplasmic stress granule | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010628 | positive regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010950 | positive regulation of endopeptidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010952 | positive regulation of peptidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0012501 | programmed cell death | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016072 | rRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016075 | rRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016553 | base conversion or substitution editing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016554 | cytidine to uridine editing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0017151 | DEAD/H-box RNA helicase binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022607 | cellular component assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022611 | dormancy process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030371 | translation repressor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031288 | sorocarp morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031329 | regulation of cellular catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031330 | negative regulation of cellular catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031425 | chloroplast RNA processing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031976 | plastid thylakoid | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034063 | stress granule assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034248 | regulation of cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034250 | positive regulation of cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034471 | ncRNA 5'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034661 | ncRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036260 | RNA capping | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036473 | cell death in response to oxidative stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042254 | ribosome biogenesis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042644 | chloroplast nucleoid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042646 | plastid nucleoid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042750 | hibernation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042803 | protein homodimerization activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043038 | amino acid activation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043280 | positive regulation of cysteine-type endopeptidase activity involved in apoptotic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043281 | regulation of cysteine-type endopeptidase activity involved in apoptotic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043462 | regulation of ATP-dependent activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043487 | regulation of RNA stability | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043488 | regulation of mRNA stability | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043489 | RNA stabilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045727 | positive regulation of translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048255 | mRNA stabilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051095 | regulation of helicase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051247 | positive regulation of protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051259 | protein complex oligomerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051262 | protein tetramerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051289 | protein homotetramerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051290 | protein heterotetramerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051291 | protein heterooligomerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051726 | regulation of cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061013 | regulation of mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070181 | small ribosomal subunit rRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071704 | organic substance metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090502 | RNA phosphodiester bond hydrolysis, endonucleolytic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090615 | mitochondrial mRNA processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097468 | programmed cell death in response to reactive oxygen species | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900871 | chloroplast mRNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901259 | chloroplast rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902280 | regulation of RNA helicase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902369 | negative regulation of RNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902373 | negative regulation of mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902806 | regulation of cell cycle G1/S phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903008 | organelle disassembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903311 | regulation of mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903312 | negative regulation of mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904821 | chloroplast disassembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1905354 | exoribonuclease complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990061 | bacterial degradosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990204 | oxidoreductase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000116 | regulation of cysteine-type endopeptidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001056 | positive regulation of cysteine-type endopeptidase activity | IEP | Predict GO terms from Neighborhoods |
| No external refs found! |