SOLTUB.AGRIA.G00000035672


Description : Polypyrimidine tract-binding family protein


Gene families : OG_02_0033865 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000035672
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_106


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000002 mitochondrial genome maintenance IEP Predict GO terms from Neighborhoods
MF GO:0003747 translation release factor activity IEP Predict GO terms from Neighborhoods
MF GO:0004034 aldose 1-epimerase activity IEP Predict GO terms from Neighborhoods
MF GO:0004177 aminopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004694 eukaryotic translation initiation factor 2alpha kinase activity IEP Predict GO terms from Neighborhoods
CC GO:0005669 transcription factor TFIID complex IEP Predict GO terms from Neighborhoods
BP GO:0006012 galactose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP Predict GO terms from Neighborhoods
BP GO:0006415 translational termination IEP Predict GO terms from Neighborhoods
BP GO:0006955 immune response IEP Predict GO terms from Neighborhoods
BP GO:0006984 ER-nucleus signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007610 behavior IEP Predict GO terms from Neighborhoods
MF GO:0008079 translation termination factor activity IEP Predict GO terms from Neighborhoods
BP GO:0008219 cell death IEP Predict GO terms from Neighborhoods
BP GO:0008344 adult locomotory behavior IEP Predict GO terms from Neighborhoods
BP GO:0008345 larval locomotory behavior IEP Predict GO terms from Neighborhoods
BP GO:0008582 regulation of synaptic assembly at neuromuscular junction IEP Predict GO terms from Neighborhoods
BP GO:0009626 plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
BP GO:0010447 response to acidic pH IEP Predict GO terms from Neighborhoods
BP GO:0010998 regulation of translational initiation by eIF2 alpha phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0012501 programmed cell death IEP Predict GO terms from Neighborhoods
MF GO:0016149 translation release factor activity, codon specific IEP Predict GO terms from Neighborhoods
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predict GO terms from Neighborhoods
MF GO:0017116 single-stranded DNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0030267 glyoxylate reductase (NADP+) activity IEP Predict GO terms from Neighborhoods
BP GO:0030537 larval behavior IEP Predict GO terms from Neighborhoods
BP GO:0031297 replication fork processing IEP Predict GO terms from Neighborhoods
BP GO:0032055 negative regulation of translation in response to stress IEP Predict GO terms from Neighborhoods
MF GO:0032552 deoxyribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032554 purine deoxyribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032558 adenyl deoxyribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032564 dATP binding IEP Predict GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034050 programmed cell death induced by symbiont IEP Predict GO terms from Neighborhoods
BP GO:0034198 cellular response to amino acid starvation IEP Predict GO terms from Neighborhoods
MF GO:0035925 mRNA 3'-UTR AU-rich region binding IEP Predict GO terms from Neighborhoods
CC GO:0036477 somatodendritic compartment IEP Predict GO terms from Neighborhoods
MF GO:0043139 5'-3' DNA helicase activity IEP Predict GO terms from Neighborhoods
BP GO:0043555 regulation of translation in response to stress IEP Predict GO terms from Neighborhoods
BP GO:0043558 regulation of translational initiation in response to stress IEP Predict GO terms from Neighborhoods
CC GO:0043596 nuclear replication fork IEP Predict GO terms from Neighborhoods
BP GO:0044806 G-quadruplex DNA unwinding IEP Predict GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0045887 positive regulation of synaptic assembly at neuromuscular junction IEP Predict GO terms from Neighborhoods
BP GO:0045947 negative regulation of translational initiation IEP Predict GO terms from Neighborhoods
MF GO:0046975 histone methyltransferase activity (H3-K36 specific) IEP Predict GO terms from Neighborhoods
BP GO:0048749 compound eye development IEP Predict GO terms from Neighborhoods
BP GO:0051259 protein complex oligomerization IEP Predict GO terms from Neighborhoods
BP GO:0051607 defense response to virus IEP Predict GO terms from Neighborhoods
BP GO:0051702 biological process involved in interaction with symbiont IEP Predict GO terms from Neighborhoods
BP GO:0051963 regulation of synapse assembly IEP Predict GO terms from Neighborhoods
BP GO:0051965 positive regulation of synapse assembly IEP Predict GO terms from Neighborhoods
BP GO:0061083 regulation of protein refolding IEP Predict GO terms from Neighborhoods
BP GO:0061084 negative regulation of protein refolding IEP Predict GO terms from Neighborhoods
MF GO:0061995 ATP-dependent protein-DNA complex displacement activity IEP Predict GO terms from Neighborhoods
MF GO:0070008 serine-type exopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0070009 serine-type aminopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0071467 cellular response to pH IEP Predict GO terms from Neighborhoods
BP GO:0071468 cellular response to acidic pH IEP Predict GO terms from Neighborhoods
BP GO:0071932 replication fork reversal IEP Predict GO terms from Neighborhoods
BP GO:0072755 cellular response to benomyl IEP Predict GO terms from Neighborhoods
BP GO:0097046 replication fork progression beyond termination site IEP Predict GO terms from Neighborhoods
MF GO:0106345 glyoxylate reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0140083 ATP-dependent protein-DNA unloading activity IEP Predict GO terms from Neighborhoods
CC GO:0140445 chromosome, telomeric repeat region IEP Predict GO terms from Neighborhoods
BP GO:0140467 integrated stress response signaling IEP Predict GO terms from Neighborhoods
BP GO:0140546 defense response to symbiont IEP Predict GO terms from Neighborhoods
BP GO:1901561 response to benomyl IEP Predict GO terms from Neighborhoods
BP GO:1901888 regulation of cell junction assembly IEP Predict GO terms from Neighborhoods
BP GO:1901890 positive regulation of cell junction assembly IEP Predict GO terms from Neighborhoods
BP GO:1903332 regulation of protein folding IEP Predict GO terms from Neighborhoods
BP GO:1903333 negative regulation of protein folding IEP Predict GO terms from Neighborhoods
BP GO:1904396 regulation of neuromuscular junction development IEP Predict GO terms from Neighborhoods
BP GO:1904398 positive regulation of neuromuscular junction development IEP Predict GO terms from Neighborhoods
BP GO:1990451 cellular stress response to acidic pH IEP Predict GO terms from Neighborhoods
BP GO:1990928 response to amino acid starvation IEP Predict GO terms from Neighborhoods
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000621 regulation of DNA replication termination IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000504 RRM_dom 9 59
IPR035979 RBD_domain_sf 3 92
No external refs found!