| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000285 | 1-phosphatidylinositol-3-phosphate 5-kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000976 | transcription cis-regulatory region binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001067 | transcription regulatory region nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001101 | response to acid chemical | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002478 | antigen processing and presentation of exogenous peptide antigen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002495 | antigen processing and presentation of peptide antigen via MHC class II | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002504 | antigen processing and presentation of peptide or polysaccharide antigen via MHC class II | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003677 | DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005200 | structural constituent of cytoskeleton | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005739 | mitochondrion | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005911 | cell-cell junction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006612 | protein targeting to membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006714 | sesquiterpenoid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006833 | water transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006873 | cellular ion homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006874 | cellular calcium ion homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006885 | regulation of pH | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006897 | endocytosis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006898 | receptor-mediated endocytosis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006906 | vesicle fusion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006996 | organelle organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007041 | lysosomal transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007165 | signal transduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007602 | phototransduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008104 | protein localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008333 | endosome to lysosome transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009314 | response to radiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009409 | response to cold | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009415 | response to water | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009416 | response to light stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009581 | detection of external stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009582 | detection of abiotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009583 | detection of light stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009584 | detection of visible light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009585 | red, far-red light phototransduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009624 | response to nematode | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009638 | phototropism | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009639 | response to red or far red light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009640 | photomorphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009641 | shade avoidance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009645 | response to low light intensity stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009649 | entrainment of circadian clock | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009687 | abscisic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009755 | hormone-mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009791 | post-embryonic development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009881 | photoreceptor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009883 | red or far-red light photoreceptor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009902 | chloroplast relocation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009903 | chloroplast avoidance movement | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010016 | shoot system morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010017 | red or far-red light signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010018 | far-red light signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010022 | meristem determinacy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010053 | root epidermal cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010114 | response to red light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010148 | transpiration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010161 | red light signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010202 | response to low fluence red light stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010218 | response to far red light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010244 | response to low fluence blue light stimulus by blue low-fluence system | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010256 | endomembrane system organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010374 | stomatal complex development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010468 | regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010582 | floral meristem determinacy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010617 | circadian regulation of calcium ion oscillation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015031 | protein transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015979 | photosynthesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016032 | viral process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016197 | endosomal transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016308 | 1-phosphatidylinositol-4-phosphate 5-kinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016477 | cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016482 | cytosolic transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0017006 | protein-tetrapyrrole linkage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0017007 | protein-bilin linkage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0017009 | protein-phycocyanobilin linkage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0017012 | protein-phytochromobilin linkage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018105 | peptidyl-serine phosphorylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018209 | peptidyl-serine modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018298 | obsolete protein-chromophore linkage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019065 | receptor-mediated endocytosis of virus by host cell | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019725 | cellular homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019750 | chloroplast localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019882 | antigen processing and presentation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019884 | antigen processing and presentation of exogenous antigen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019886 | antigen processing and presentation of exogenous peptide antigen via MHC class II | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030003 | cellular cation homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030004 | cellular monovalent inorganic cation homeostasis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030054 | cell junction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030593 | neutrophil chemotaxis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030595 | leukocyte chemotaxis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030641 | regulation of cellular pH | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030666 | endocytic vesicle membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030670 | phagocytic vesicle membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030912 | response to deep water | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031516 | far-red light photoreceptor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031517 | red light photoreceptor activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031901 | early endosome membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031902 | late endosome membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032288 | myelin assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032438 | melanosome organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033036 | macromolecule localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034504 | protein localization to nucleus | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034593 | phosphatidylinositol bisphosphate phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034595 | phosphatidylinositol phosphate 5-phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035556 | intracellular signal transduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036289 | peptidyl-serine autophosphorylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042044 | fluid transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042752 | regulation of circadian rhythm | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042803 | protein homodimerization activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043288 | apocarotenoid metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043813 | phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044088 | regulation of vacuole organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045017 | glycerolipid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0045121 | membrane raft | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045184 | establishment of protein localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045892 | negative regulation of DNA-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046794 | transport of virus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046854 | phosphatidylinositol phosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0046983 | protein dimerization activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048002 | antigen processing and presentation of peptide antigen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048284 | organelle fusion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048438 | floral whorl development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048467 | gynoecium development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048523 | negative regulation of cellular process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048753 | pigment granule organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048870 | cell motility | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050801 | ion homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050829 | defense response to Gram-negative bacterium | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050900 | leukocyte migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051253 | negative regulation of RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051452 | intracellular pH reduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051453 | regulation of intracellular pH | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051480 | regulation of cytosolic calcium ion concentration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051644 | plastid localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051649 | establishment of localization in cell | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051667 | establishment of plastid localization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0052742 | phosphatidylinositol kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0052810 | 1-phosphatidylinositol-5-kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0052866 | phosphatidylinositol phosphate phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0055074 | calcium ion homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0055080 | cation homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0055082 | cellular chemical homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060326 | cell chemotaxis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061025 | membrane fusion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061062 | regulation of nematode larval development | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070161 | anchoring junction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071214 | cellular response to abiotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071478 | cellular response to radiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071482 | cellular response to light stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071489 | cellular response to red or far red light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071490 | cellular response to far red light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071491 | cellular response to red light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071621 | granulocyte chemotaxis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071705 | nitrogen compound transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072503 | cellular divalent inorganic cation homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072507 | divalent inorganic cation homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0075509 | endocytosis involved in viral entry into host cell | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080127 | fruit septum development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080190 | lateral growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080191 | secondary thickening | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090174 | organelle membrane fusion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090332 | stomatal closure | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090383 | phagosome acidification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090385 | phagosome-lysosome fusion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090558 | plant epidermis development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097352 | autophagosome maturation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097529 | myeloid leukocyte migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097530 | granulocyte migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098857 | membrane microdomain | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0104004 | cellular response to environmental stimulus | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0106018 | phosphatidylinositol-3,5-bisphosphate phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140299 | small molecule sensor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902115 | regulation of organelle assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902644 | tertiary alcohol metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902679 | negative regulation of RNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903100 | 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903426 | regulation of reactive oxygen species biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903507 | negative regulation of nucleic acid-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904562 | phosphatidylinositol 5-phosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905161 | protein localization to phagocytic vesicle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905328 | plant septum development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990266 | neutrophil migration | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990841 | promoter-specific chromatin binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000785 | regulation of autophagosome assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |