SOLTUB.AGRIA.G00000035973


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_02_0023335 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000035973
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_41


Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEA AHRD
MF GO:0003700 DNA-binding transcription factor activity IEA AHRD
CC GO:0005634 nucleus IEA AHRD
BP GO:0009269 response to desiccation IEA AHRD
BP GO:0009611 response to wounding IEA AHRD
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEA AHRD
BP GO:0009737 response to abscisic acid IEA AHRD
BP GO:0009753 response to jasmonic acid IEA AHRD
CC GO:0009941 chloroplast envelope IEA AHRD
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEA AHRD
BP GO:0010200 response to chitin IEA AHRD
BP GO:0010374 stomatal complex development IEA AHRD
BP GO:0010629 negative regulation of gene expression IEA AHRD
BP GO:0016036 cellular response to phosphate starvation IEA AHRD
MF GO:0019900 kinase binding IEA AHRD
BP GO:0042538 hyperosmotic salinity response IEA AHRD
MF GO:0043425 bHLH transcription factor binding IEA AHRD
BP GO:0043619 regulation of transcription from RNA polymerase II promoter in response to oxidative stress IEA AHRD
BP GO:0045893 positive regulation of DNA-templated transcription IEA AHRD
BP GO:0051090 regulation of DNA-binding transcription factor activity IEA AHRD
BP GO:0051289 protein homotetramerization IEA AHRD
BP GO:0080147 root hair cell development IEA AHRD
BP GO:0090357 regulation of tryptophan metabolic process IEA AHRD
BP GO:0106167 extracellular ATP signaling IEA AHRD
BP GO:2000068 regulation of defense response to insect IEA AHRD
BP GO:2000652 regulation of secondary cell wall biogenesis IEA AHRD
Type GO Term Name Evidence Source
MF GO:0000217 DNA secondary structure binding IEP Predict GO terms from Neighborhoods
CC GO:0000786 nucleosome IEP Predict GO terms from Neighborhoods
CC GO:0000791 euchromatin IEP Predict GO terms from Neighborhoods
CC GO:0000794 condensed nuclear chromosome IEP Predict GO terms from Neighborhoods
BP GO:0001736 establishment of planar polarity IEP Predict GO terms from Neighborhoods
BP GO:0002832 negative regulation of response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0003002 regionalization IEP Predict GO terms from Neighborhoods
MF GO:0003680 minor groove of adenine-thymine-rich DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Predict GO terms from Neighborhoods
MF GO:0004371 glycerone kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004521 endoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004683 calmodulin-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Predict GO terms from Neighborhoods
CC GO:0005700 polytene chromosome IEP Predict GO terms from Neighborhoods
CC GO:0005731 nucleolus organizer region IEP Predict GO terms from Neighborhoods
BP GO:0006071 glycerol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0006482 protein demethylation IEP Predict GO terms from Neighborhoods
BP GO:0006879 cellular iron ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0007140 male meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0007143 female meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0007164 establishment of tissue polarity IEP Predict GO terms from Neighborhoods
BP GO:0007389 pattern specification process IEP Predict GO terms from Neighborhoods
MF GO:0008199 ferric iron binding IEP Predict GO terms from Neighborhoods
BP GO:0008214 protein dealkylation IEP Predict GO terms from Neighborhoods
MF GO:0008395 steroid hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0009561 megagametogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009616 RNAi-mediated antiviral immune response IEP Predict GO terms from Neighborhoods
BP GO:0009647 skotomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009855 determination of bilateral symmetry IEP Predict GO terms from Neighborhoods
BP GO:0009934 regulation of meristem structural organization IEP Predict GO terms from Neighborhoods
BP GO:0009939 positive regulation of gibberellic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0010011 auxin binding IEP Predict GO terms from Neighborhoods
MF GO:0010012 steroid 22-alpha hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0010051 xylem and phloem pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010067 procambium histogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010072 primary shoot apical meristem specification IEP Predict GO terms from Neighborhoods
BP GO:0010087 phloem or xylem histogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010089 xylem development IEP Predict GO terms from Neighborhoods
BP GO:0010208 pollen wall assembly IEP Predict GO terms from Neighborhoods
BP GO:0010268 brassinosteroid homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0010328 auxin influx transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0010358 leaf shaping IEP Predict GO terms from Neighborhoods
BP GO:0010501 RNA secondary structure unwinding IEP Predict GO terms from Neighborhoods
BP GO:0010528 regulation of transposition IEP Predict GO terms from Neighborhoods
BP GO:0010529 negative regulation of transposition IEP Predict GO terms from Neighborhoods
BP GO:0010586 miRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010817 regulation of hormone levels IEP Predict GO terms from Neighborhoods
MF GO:0010857 calcium-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0016129 phytosteroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016132 brassinosteroid biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0016442 RISC complex IEP Predict GO terms from Neighborhoods
BP GO:0016577 histone demethylation IEP Predict GO terms from Neighborhoods
BP GO:0019400 alditol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019405 alditol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019563 glycerol catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0030874 nucleolar chromatin IEP Predict GO terms from Neighborhoods
CC GO:0030875 rDNA protrusion IEP Predict GO terms from Neighborhoods
BP GO:0031056 regulation of histone modification IEP Predict GO terms from Neighborhoods
BP GO:0031057 negative regulation of histone modification IEP Predict GO terms from Neighborhoods
BP GO:0031058 positive regulation of histone modification IEP Predict GO terms from Neighborhoods
BP GO:0031060 regulation of histone methylation IEP Predict GO terms from Neighborhoods
BP GO:0031062 positive regulation of histone methylation IEP Predict GO terms from Neighborhoods
CC GO:0031332 RNAi effector complex IEP Predict GO terms from Neighborhoods
BP GO:0031348 negative regulation of defense response IEP Predict GO terms from Neighborhoods
BP GO:0031400 negative regulation of protein modification process IEP Predict GO terms from Neighborhoods
BP GO:0031401 positive regulation of protein modification process IEP Predict GO terms from Neighborhoods
MF GO:0031490 chromatin DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0031491 nucleosome binding IEP Predict GO terms from Neighborhoods
MF GO:0031492 nucleosomal DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0031624 ubiquitin conjugating enzyme binding IEP Predict GO terms from Neighborhoods
BP GO:0032102 negative regulation of response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0033169 histone H3-K9 demethylation IEP Predict GO terms from Neighborhoods
BP GO:0035019 somatic stem cell population maintenance IEP Predict GO terms from Neighborhoods
CC GO:0035059 RCAF complex IEP Predict GO terms from Neighborhoods
BP GO:0035065 regulation of histone acetylation IEP Predict GO terms from Neighborhoods
BP GO:0035067 negative regulation of histone acetylation IEP Predict GO terms from Neighborhoods
BP GO:0035195 miRNA-mediated gene silencing IEP Predict GO terms from Neighborhoods
MF GO:0035197 siRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0035198 miRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0042445 hormone metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0042562 hormone binding IEP Predict GO terms from Neighborhoods
BP GO:0042814 monopolar cell growth IEP Predict GO terms from Neighborhoods
MF GO:0044390 ubiquitin-like protein conjugating enzyme binding IEP Predict GO terms from Neighborhoods
CC GO:0044815 DNA packaging complex IEP Predict GO terms from Neighborhoods
BP GO:0046164 alcohol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046174 polyol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046621 negative regulation of organ growth IEP Predict GO terms from Neighborhoods
MF GO:0047324 phosphoenolpyruvate-glycerone phosphotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0048437 floral organ development IEP Predict GO terms from Neighborhoods
BP GO:0048441 petal development IEP Predict GO terms from Neighborhoods
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048657 anther wall tapetum cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048829 root cap development IEP Predict GO terms from Neighborhoods
BP GO:0048830 adventitious root development IEP Predict GO terms from Neighborhoods
BP GO:0051094 positive regulation of developmental process IEP Predict GO terms from Neighborhoods
BP GO:0051570 regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051574 positive regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods
BP GO:0055046 microgametogenesis IEP Predict GO terms from Neighborhoods
BP GO:0060919 auxin import into cell IEP Predict GO terms from Neighborhoods
BP GO:0061866 obsolete negative regulation of histone H3-S10 phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0061980 regulatory RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0070076 histone lysine demethylation IEP Predict GO terms from Neighborhoods
CC GO:0070578 RISC-loading complex IEP Predict GO terms from Neighborhoods
BP GO:0080060 integument development IEP Predict GO terms from Neighborhoods
MF GO:0080132 fatty acid alpha-hydroxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0080161 auxin transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0090421 embryonic meristem initiation IEP Predict GO terms from Neighborhoods
CC GO:0098687 chromosomal region IEP Predict GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Predict GO terms from Neighborhoods
BP GO:0120178 steroid hormone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1900109 regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900111 positive regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900424 regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:1900425 negative regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:1901222 regulation of NIK/NF-kappaB signaling IEP Predict GO terms from Neighborhoods
BP GO:1901224 positive regulation of NIK/NF-kappaB signaling IEP Predict GO terms from Neighborhoods
BP GO:1901983 regulation of protein acetylation IEP Predict GO terms from Neighborhoods
BP GO:1901984 negative regulation of protein acetylation IEP Predict GO terms from Neighborhoods
BP GO:1902183 regulation of shoot apical meristem development IEP Predict GO terms from Neighborhoods
BP GO:1902347 response to strigolactone IEP Predict GO terms from Neighborhoods
CC GO:1902555 endoribonuclease complex IEP Predict GO terms from Neighborhoods
BP GO:1903341 regulation of meiotic DNA double-strand break formation IEP Predict GO terms from Neighborhoods
BP GO:1903343 positive regulation of meiotic DNA double-strand break formation IEP Predict GO terms from Neighborhoods
CC GO:1905348 endonuclease complex IEP Predict GO terms from Neighborhoods
BP GO:2000241 regulation of reproductive process IEP Predict GO terms from Neighborhoods
BP GO:2000243 positive regulation of reproductive process IEP Predict GO terms from Neighborhoods
BP GO:2000615 regulation of histone H3-K9 acetylation IEP Predict GO terms from Neighborhoods
BP GO:2000616 negative regulation of histone H3-K9 acetylation IEP Predict GO terms from Neighborhoods
BP GO:2000756 regulation of peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
BP GO:2000757 negative regulation of peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036638 HLH_DNA-bd_sf 66 132
IPR011598 bHLH_dom 78 124
No external refs found!