Description : RNA binding protein
Gene families : OG_02_0032134 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000036453 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_153 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000350 | generation of catalytic spliceosome for second transesterification step | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000389 | mRNA 3'-splice site recognition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000974 | Prp19 complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005681 | spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005684 | U2-type spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006376 | mRNA splice site selection | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006401 | RNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006402 | mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007005 | mitochondrion organization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009536 | plastid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009637 | response to blue light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009641 | shade avoidance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009644 | response to high light intensity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009742 | brassinosteroid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010099 | regulation of photomorphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010468 | regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031301 | integral component of organelle membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031306 | intrinsic component of mitochondrial outer membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031307 | integral component of mitochondrial outer membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031396 | regulation of protein ubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031397 | negative regulation of protein ubiquitination | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032592 | integral component of mitochondrial membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0035145 | exon-exon junction complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042254 | ribosome biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043401 | steroid hormone mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048519 | negative regulation of biological process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050657 | nucleic acid transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050658 | RNA transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051028 | mRNA transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051236 | establishment of RNA localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051348 | negative regulation of transferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051438 | regulation of ubiquitin-protein transferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051444 | negative regulation of ubiquitin-protein transferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0055121 | response to high fluence blue light stimulus by blue high-fluence system | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060966 | regulation of gene silencing by RNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070920 | regulation of production of small RNA involved in gene silencing by RNA | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071006 | U2-type catalytic step 1 spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071008 | U2-type post-mRNA release spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071012 | catalytic step 1 spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071013 | catalytic step 2 spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071014 | post-mRNA release spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071020 | post-spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080022 | primary root development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098573 | intrinsic component of mitochondrial membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903320 | regulation of protein modification by small protein conjugation or removal | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903321 | negative regulation of protein modification by small protein conjugation or removal | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903798 | regulation of miRNA maturation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904666 | regulation of ubiquitin protein ligase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904667 | negative regulation of ubiquitin protein ligase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000030 | regulation of response to red or far red light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000634 | regulation of primary miRNA processing | IEP | Predict GO terms from Neighborhoods |
| No external refs found! |